Job ID = 3785777 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-11-01T05:30:59 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed : NET - Reading information from the socket failed ) 2019-11-01T05:30:59 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed : NET - Reading information from the socket failed ) 2019-11-01T05:31:58 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:31:58 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:31:58 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:33:42 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:33:42 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:33:53 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:34:05 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:34:43 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:35:12 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:35:38 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:35:56 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:36:12 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:36:13 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - mbedtls_ssl_handshake returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:36:13 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - ktls_handshake failed while accessing '130.14.250.26' from '172.19.7.57' 2019-11-01T05:36:13 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - Failed to create TLS stream for 'sra-download.ncbi.nlm.nih.gov' (130.14.250.26) from '172.19.7.57' 2019-11-01T05:36:29 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:36:31 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - mbedtls_ssl_handshake returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:36:31 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - ktls_handshake failed while accessing '130.14.250.25' from '172.19.7.57' 2019-11-01T05:36:31 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - Failed to create TLS stream for 'sra-download.ncbi.nlm.nih.gov' (130.14.250.25) from '172.19.7.57' 2019-11-01T05:36:45 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:36:54 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:37:48 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:38:29 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:39:31 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:39:36 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:39:46 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:39:47 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:39:49 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:43:21 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:43:21 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:43:32 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:43:32 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:44:44 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:45:15 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:46:27 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:46:37 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:47:13 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:47:31 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:47:58 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:48:30 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:48:30 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:50:19 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:50:35 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:50:46 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:51:10 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - mbedtls_ssl_handshake returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:51:10 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - ktls_handshake failed while accessing '130.14.250.26' from '172.19.7.57' 2019-11-01T05:51:10 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - Failed to create TLS stream for 'sra-download.ncbi.nlm.nih.gov' (130.14.250.26) from '172.19.7.57' 2019-11-01T05:51:16 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:52:23 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:52:33 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:52:33 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:53:14 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:53:42 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:53:52 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:53:55 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:54:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:55:22 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:56:00 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:56:08 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:57:35 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:57:44 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:57:58 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:59:09 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T06:02:40 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T06:04:47 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T06:05:30 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T06:07:27 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 90,296,341 reads read : 180,592,682 reads written : 90,296,341 reads 0-length : 90,296,341 spots read : 54,134,320 reads read : 108,268,640 reads written : 54,134,320 reads 0-length : 54,134,320 fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:29:41 144430661 reads; of these: 144430661 (100.00%) were unpaired; of these: 41327069 (28.61%) aligned 0 times 85164313 (58.97%) aligned exactly 1 time 17939279 (12.42%) aligned >1 times 71.39% overall alignment rate Time searching: 00:29:42 Overall time: 00:29:43 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 44 files... [bam_rmdupse_core] 45142736 / 103103592 = 0.4378 in library ' ' BAM に変換しました。 Bed ファイルを作成中... INFO @ Fri, 01 Nov 2019 16:31:52: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 01 Nov 2019 16:31:52: #1 read tag files... INFO @ Fri, 01 Nov 2019 16:31:52: #1 read treatment tags... INFO @ Fri, 01 Nov 2019 16:32:01: 1000000 INFO @ Fri, 01 Nov 2019 16:32:09: 2000000 INFO @ Fri, 01 Nov 2019 16:32:17: 3000000 INFO @ Fri, 01 Nov 2019 16:32:22: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 01 Nov 2019 16:32:22: #1 read tag files... INFO @ Fri, 01 Nov 2019 16:32:22: #1 read treatment tags... INFO @ Fri, 01 Nov 2019 16:32:26: 4000000 INFO @ Fri, 01 Nov 2019 16:32:31: 1000000 INFO @ Fri, 01 Nov 2019 16:32:35: 5000000 INFO @ Fri, 01 Nov 2019 16:32:40: 2000000 INFO @ Fri, 01 Nov 2019 16:32:43: 6000000 INFO @ Fri, 01 Nov 2019 16:32:49: 3000000 BedGraph に変換中... INFO @ Fri, 01 Nov 2019 16:32:52: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 01 Nov 2019 16:32:52: #1 read tag files... INFO @ Fri, 01 Nov 2019 16:32:52: #1 read treatment tags... INFO @ Fri, 01 Nov 2019 16:32:52: 7000000 INFO @ Fri, 01 Nov 2019 16:32:58: 4000000 INFO @ Fri, 01 Nov 2019 16:33:01: 8000000 INFO @ Fri, 01 Nov 2019 16:33:01: 1000000 INFO @ Fri, 01 Nov 2019 16:33:07: 5000000 INFO @ Fri, 01 Nov 2019 16:33:10: 9000000 INFO @ Fri, 01 Nov 2019 16:33:10: 2000000 INFO @ Fri, 01 Nov 2019 16:33:16: 6000000 INFO @ Fri, 01 Nov 2019 16:33:19: 3000000 INFO @ Fri, 01 Nov 2019 16:33:19: 10000000 INFO @ Fri, 01 Nov 2019 16:33:25: 7000000 INFO @ Fri, 01 Nov 2019 16:33:28: 4000000 INFO @ Fri, 01 Nov 2019 16:33:28: 11000000 INFO @ Fri, 01 Nov 2019 16:33:33: 8000000 INFO @ Fri, 01 Nov 2019 16:33:36: 5000000 INFO @ Fri, 01 Nov 2019 16:33:37: 12000000 INFO @ Fri, 01 Nov 2019 16:33:42: 9000000 INFO @ Fri, 01 Nov 2019 16:33:45: 6000000 INFO @ Fri, 01 Nov 2019 16:33:45: 13000000 INFO @ Fri, 01 Nov 2019 16:33:51: 10000000 INFO @ Fri, 01 Nov 2019 16:33:53: 7000000 INFO @ Fri, 01 Nov 2019 16:33:54: 14000000 INFO @ Fri, 01 Nov 2019 16:33:59: 11000000 INFO @ Fri, 01 Nov 2019 16:34:02: 8000000 INFO @ Fri, 01 Nov 2019 16:34:03: 15000000 INFO @ Fri, 01 Nov 2019 16:34:08: 12000000 INFO @ Fri, 01 Nov 2019 16:34:11: 9000000 INFO @ Fri, 01 Nov 2019 16:34:12: 16000000 INFO @ Fri, 01 Nov 2019 16:34:16: 13000000 INFO @ Fri, 01 Nov 2019 16:34:19: 10000000 INFO @ Fri, 01 Nov 2019 16:34:21: 17000000 INFO @ Fri, 01 Nov 2019 16:34:25: 14000000 INFO @ Fri, 01 Nov 2019 16:34:28: 11000000 INFO @ Fri, 01 Nov 2019 16:34:30: 18000000 INFO @ Fri, 01 Nov 2019 16:34:34: 15000000 INFO @ Fri, 01 Nov 2019 16:34:36: 12000000 INFO @ Fri, 01 Nov 2019 16:34:38: 19000000 INFO @ Fri, 01 Nov 2019 16:34:43: 16000000 INFO @ Fri, 01 Nov 2019 16:34:45: 13000000 INFO @ Fri, 01 Nov 2019 16:34:47: 20000000 INFO @ Fri, 01 Nov 2019 16:34:52: 17000000 INFO @ Fri, 01 Nov 2019 16:34:53: 14000000 INFO @ Fri, 01 Nov 2019 16:34:56: 21000000 INFO @ Fri, 01 Nov 2019 16:35:01: 18000000 INFO @ Fri, 01 Nov 2019 16:35:02: 15000000 INFO @ Fri, 01 Nov 2019 16:35:05: 22000000 INFO @ Fri, 01 Nov 2019 16:35:10: 19000000 INFO @ Fri, 01 Nov 2019 16:35:10: 16000000 INFO @ Fri, 01 Nov 2019 16:35:13: 23000000 INFO @ Fri, 01 Nov 2019 16:35:19: 17000000 INFO @ Fri, 01 Nov 2019 16:35:19: 20000000 INFO @ Fri, 01 Nov 2019 16:35:23: 24000000 INFO @ Fri, 01 Nov 2019 16:35:28: 18000000 INFO @ Fri, 01 Nov 2019 16:35:29: 21000000 INFO @ Fri, 01 Nov 2019 16:35:32: 25000000 INFO @ Fri, 01 Nov 2019 16:35:36: 19000000 INFO @ Fri, 01 Nov 2019 16:35:38: 22000000 INFO @ Fri, 01 Nov 2019 16:35:42: 26000000 INFO @ Fri, 01 Nov 2019 16:35:45: 20000000 INFO @ Fri, 01 Nov 2019 16:35:48: 23000000 INFO @ Fri, 01 Nov 2019 16:35:51: 27000000 INFO @ Fri, 01 Nov 2019 16:35:53: 21000000 INFO @ Fri, 01 Nov 2019 16:35:56: 24000000 INFO @ Fri, 01 Nov 2019 16:35:59: 28000000 INFO @ Fri, 01 Nov 2019 16:36:02: 22000000 INFO @ Fri, 01 Nov 2019 16:36:05: 25000000 INFO @ Fri, 01 Nov 2019 16:36:08: 29000000 INFO @ Fri, 01 Nov 2019 16:36:10: 23000000 INFO @ Fri, 01 Nov 2019 16:36:13: 26000000 INFO @ Fri, 01 Nov 2019 16:36:16: 30000000 INFO @ Fri, 01 Nov 2019 16:36:19: 24000000 INFO @ Fri, 01 Nov 2019 16:36:22: 27000000 INFO @ Fri, 01 Nov 2019 16:36:25: 31000000 INFO @ Fri, 01 Nov 2019 16:36:27: 25000000 INFO @ Fri, 01 Nov 2019 16:36:31: 28000000 INFO @ Fri, 01 Nov 2019 16:36:33: 32000000 INFO @ Fri, 01 Nov 2019 16:36:35: 26000000 INFO @ Fri, 01 Nov 2019 16:36:39: 29000000 INFO @ Fri, 01 Nov 2019 16:36:42: 33000000 INFO @ Fri, 01 Nov 2019 16:36:44: 27000000 INFO @ Fri, 01 Nov 2019 16:36:48: 30000000 INFO @ Fri, 01 Nov 2019 16:36:50: 34000000 INFO @ Fri, 01 Nov 2019 16:36:52: 28000000 INFO @ Fri, 01 Nov 2019 16:36:56: 31000000 INFO @ Fri, 01 Nov 2019 16:36:59: 35000000 INFO @ Fri, 01 Nov 2019 16:37:01: 29000000 INFO @ Fri, 01 Nov 2019 16:37:05: 32000000 INFO @ Fri, 01 Nov 2019 16:37:08: 36000000 INFO @ Fri, 01 Nov 2019 16:37:10: 30000000 INFO @ Fri, 01 Nov 2019 16:37:13: 33000000 INFO @ Fri, 01 Nov 2019 16:37:16: 37000000 INFO @ Fri, 01 Nov 2019 16:37:18: 31000000 INFO @ Fri, 01 Nov 2019 16:37:21: 34000000 INFO @ Fri, 01 Nov 2019 16:37:24: 38000000 INFO @ Fri, 01 Nov 2019 16:37:26: 32000000 INFO @ Fri, 01 Nov 2019 16:37:29: 35000000 INFO @ Fri, 01 Nov 2019 16:37:32: 39000000 INFO @ Fri, 01 Nov 2019 16:37:35: 33000000 INFO @ Fri, 01 Nov 2019 16:37:37: 36000000 INFO @ Fri, 01 Nov 2019 16:37:40: 40000000 INFO @ Fri, 01 Nov 2019 16:37:43: 34000000 INFO @ Fri, 01 Nov 2019 16:37:45: 37000000 INFO @ Fri, 01 Nov 2019 16:37:49: 41000000 INFO @ Fri, 01 Nov 2019 16:37:51: 35000000 INFO @ Fri, 01 Nov 2019 16:37:53: 38000000 INFO @ Fri, 01 Nov 2019 16:37:57: 42000000 INFO @ Fri, 01 Nov 2019 16:38:00: 36000000 INFO @ Fri, 01 Nov 2019 16:38:02: 39000000 INFO @ Fri, 01 Nov 2019 16:38:05: 43000000 INFO @ Fri, 01 Nov 2019 16:38:08: 37000000 INFO @ Fri, 01 Nov 2019 16:38:10: 40000000 INFO @ Fri, 01 Nov 2019 16:38:13: 44000000 INFO @ Fri, 01 Nov 2019 16:38:16: 38000000 INFO @ Fri, 01 Nov 2019 16:38:18: 41000000 INFO @ Fri, 01 Nov 2019 16:38:21: 45000000 INFO @ Fri, 01 Nov 2019 16:38:25: 39000000 INFO @ Fri, 01 Nov 2019 16:38:26: 42000000 INFO @ Fri, 01 Nov 2019 16:38:30: 46000000 INFO @ Fri, 01 Nov 2019 16:38:33: 40000000 INFO @ Fri, 01 Nov 2019 16:38:34: 43000000 INFO @ Fri, 01 Nov 2019 16:38:38: 47000000 INFO @ Fri, 01 Nov 2019 16:38:41: 41000000 INFO @ Fri, 01 Nov 2019 16:38:43: 44000000 INFO @ Fri, 01 Nov 2019 16:38:46: 48000000 INFO @ Fri, 01 Nov 2019 16:38:50: 42000000 INFO @ Fri, 01 Nov 2019 16:38:51: 45000000 INFO @ Fri, 01 Nov 2019 16:38:55: 49000000 INFO @ Fri, 01 Nov 2019 16:38:58: 43000000 INFO @ Fri, 01 Nov 2019 16:38:59: 46000000 INFO @ Fri, 01 Nov 2019 16:39:03: 50000000 INFO @ Fri, 01 Nov 2019 16:39:06: 44000000 INFO @ Fri, 01 Nov 2019 16:39:07: 47000000 INFO @ Fri, 01 Nov 2019 16:39:11: 51000000 INFO @ Fri, 01 Nov 2019 16:39:14: 45000000 INFO @ Fri, 01 Nov 2019 16:39:16: 48000000 INFO @ Fri, 01 Nov 2019 16:39:19: 52000000 INFO @ Fri, 01 Nov 2019 16:39:23: 46000000 INFO @ Fri, 01 Nov 2019 16:39:24: 49000000 INFO @ Fri, 01 Nov 2019 16:39:27: 53000000 INFO @ Fri, 01 Nov 2019 16:39:31: 47000000 INFO @ Fri, 01 Nov 2019 16:39:32: 50000000 INFO @ Fri, 01 Nov 2019 16:39:36: 54000000 INFO @ Fri, 01 Nov 2019 16:39:39: 48000000 INFO @ Fri, 01 Nov 2019 16:39:40: 51000000 INFO @ Fri, 01 Nov 2019 16:39:44: 55000000 INFO @ Fri, 01 Nov 2019 16:39:47: 49000000 INFO @ Fri, 01 Nov 2019 16:39:48: 52000000 INFO @ Fri, 01 Nov 2019 16:39:52: 56000000 INFO @ Fri, 01 Nov 2019 16:39:55: 50000000 INFO @ Fri, 01 Nov 2019 16:39:56: 53000000 INFO @ Fri, 01 Nov 2019 16:40:00: 57000000 INFO @ Fri, 01 Nov 2019 16:40:04: 51000000 INFO @ Fri, 01 Nov 2019 16:40:04: 54000000 INFO @ Fri, 01 Nov 2019 16:40:08: #1 tag size is determined as 51 bps INFO @ Fri, 01 Nov 2019 16:40:08: #1 tag size = 51 INFO @ Fri, 01 Nov 2019 16:40:08: #1 total tags in treatment: 57960856 INFO @ Fri, 01 Nov 2019 16:40:08: #1 user defined the maximum tags... INFO @ Fri, 01 Nov 2019 16:40:08: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 01 Nov 2019 16:40:09: #1 tags after filtering in treatment: 57960856 INFO @ Fri, 01 Nov 2019 16:40:09: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 01 Nov 2019 16:40:09: #1 finished! INFO @ Fri, 01 Nov 2019 16:40:09: #2 Build Peak Model... INFO @ Fri, 01 Nov 2019 16:40:09: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 01 Nov 2019 16:40:12: 52000000 INFO @ Fri, 01 Nov 2019 16:40:12: 55000000 INFO @ Fri, 01 Nov 2019 16:40:14: #2 number of paired peaks: 0 WARNING @ Fri, 01 Nov 2019 16:40:14: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 01 Nov 2019 16:40:14: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 01 Nov 2019 16:40:20: 53000000 INFO @ Fri, 01 Nov 2019 16:40:20: 56000000 INFO @ Fri, 01 Nov 2019 16:40:28: 57000000 INFO @ Fri, 01 Nov 2019 16:40:28: 54000000 INFO @ Fri, 01 Nov 2019 16:40:36: #1 tag size is determined as 51 bps INFO @ Fri, 01 Nov 2019 16:40:36: #1 tag size = 51 INFO @ Fri, 01 Nov 2019 16:40:36: #1 total tags in treatment: 57960856 INFO @ Fri, 01 Nov 2019 16:40:36: #1 user defined the maximum tags... INFO @ Fri, 01 Nov 2019 16:40:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 01 Nov 2019 16:40:36: 55000000 INFO @ Fri, 01 Nov 2019 16:40:37: #1 tags after filtering in treatment: 57960856 INFO @ Fri, 01 Nov 2019 16:40:37: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 01 Nov 2019 16:40:37: #1 finished! INFO @ Fri, 01 Nov 2019 16:40:37: #2 Build Peak Model... INFO @ Fri, 01 Nov 2019 16:40:37: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 01 Nov 2019 16:40:42: #2 number of paired peaks: 0 WARNING @ Fri, 01 Nov 2019 16:40:42: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 01 Nov 2019 16:40:42: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 01 Nov 2019 16:40:45: 56000000 INFO @ Fri, 01 Nov 2019 16:40:53: 57000000 INFO @ Fri, 01 Nov 2019 16:41:01: #1 tag size is determined as 51 bps INFO @ Fri, 01 Nov 2019 16:41:01: #1 tag size = 51 INFO @ Fri, 01 Nov 2019 16:41:01: #1 total tags in treatment: 57960856 INFO @ Fri, 01 Nov 2019 16:41:01: #1 user defined the maximum tags... INFO @ Fri, 01 Nov 2019 16:41:01: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 01 Nov 2019 16:41:02: #1 tags after filtering in treatment: 57960856 INFO @ Fri, 01 Nov 2019 16:41:02: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 01 Nov 2019 16:41:02: #1 finished! INFO @ Fri, 01 Nov 2019 16:41:02: #2 Build Peak Model... INFO @ Fri, 01 Nov 2019 16:41:02: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 01 Nov 2019 16:41:07: #2 number of paired peaks: 0 WARNING @ Fri, 01 Nov 2019 16:41:07: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 01 Nov 2019 16:41:07: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545239/SRX5545239.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。