Job ID = 10714488 sra ファイルのダウンロード中... Completed: 5845707K bytes transferred in 88 seconds (540432K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 82483409 spots for /home/okishinya/chipatlas/results/ce10/SRX4085404/SRR7167433.sra Written 82483409 spots for /home/okishinya/chipatlas/results/ce10/SRX4085404/SRR7167433.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:20:30 82483409 reads; of these: 82483409 (100.00%) were paired; of these: 2936774 (3.56%) aligned concordantly 0 times 71266536 (86.40%) aligned concordantly exactly 1 time 8280099 (10.04%) aligned concordantly >1 times ---- 2936774 pairs aligned concordantly 0 times; of these: 539540 (18.37%) aligned discordantly 1 time ---- 2397234 pairs aligned 0 times concordantly or discordantly; of these: 4794468 mates make up the pairs; of these: 3449796 (71.95%) aligned 0 times 1077901 (22.48%) aligned exactly 1 time 266771 (5.56%) aligned >1 times 97.91% overall alignment rate Time searching: 01:20:30 Overall time: 01:20:30 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 68 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 21496521 / 79913653 = 0.2690 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 03 Jun 2018 14:58:49: # Command line: callpeak -t SRX4085404.bam -f BAM -g ce -n SRX4085404.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX4085404.10 # format = BAM # ChIP-seq file = ['SRX4085404.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:58:49: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:58:49: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:58:49: # Command line: callpeak -t SRX4085404.bam -f BAM -g ce -n SRX4085404.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX4085404.05 # format = BAM # ChIP-seq file = ['SRX4085404.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:58:49: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:58:49: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:58:49: # Command line: callpeak -t SRX4085404.bam -f BAM -g ce -n SRX4085404.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX4085404.20 # format = BAM # ChIP-seq file = ['SRX4085404.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:58:49: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:58:49: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:58:57: 1000000 INFO @ Sun, 03 Jun 2018 14:58:57: 1000000 INFO @ Sun, 03 Jun 2018 14:58:58: 1000000 INFO @ Sun, 03 Jun 2018 14:59:05: 2000000 INFO @ Sun, 03 Jun 2018 14:59:05: 2000000 INFO @ Sun, 03 Jun 2018 14:59:06: 2000000 INFO @ Sun, 03 Jun 2018 14:59:12: 3000000 INFO @ Sun, 03 Jun 2018 14:59:13: 3000000 INFO @ Sun, 03 Jun 2018 14:59:14: 3000000 INFO @ Sun, 03 Jun 2018 14:59:20: 4000000 INFO @ Sun, 03 Jun 2018 14:59:21: 4000000 INFO @ Sun, 03 Jun 2018 14:59:22: 4000000 INFO @ Sun, 03 Jun 2018 14:59:27: 5000000 INFO @ Sun, 03 Jun 2018 14:59:28: 5000000 INFO @ Sun, 03 Jun 2018 14:59:30: 5000000 INFO @ Sun, 03 Jun 2018 14:59:35: 6000000 INFO @ Sun, 03 Jun 2018 14:59:36: 6000000 INFO @ Sun, 03 Jun 2018 14:59:38: 6000000 INFO @ Sun, 03 Jun 2018 14:59:42: 7000000 INFO @ Sun, 03 Jun 2018 14:59:44: 7000000 INFO @ Sun, 03 Jun 2018 14:59:46: 7000000 INFO @ Sun, 03 Jun 2018 14:59:50: 8000000 INFO @ Sun, 03 Jun 2018 14:59:52: 8000000 INFO @ Sun, 03 Jun 2018 14:59:54: 8000000 INFO @ Sun, 03 Jun 2018 14:59:57: 9000000 INFO @ Sun, 03 Jun 2018 15:00:00: 9000000 INFO @ Sun, 03 Jun 2018 15:00:02: 9000000 INFO @ Sun, 03 Jun 2018 15:00:04: 10000000 INFO @ Sun, 03 Jun 2018 15:00:07: 10000000 INFO @ Sun, 03 Jun 2018 15:00:10: 10000000 INFO @ Sun, 03 Jun 2018 15:00:12: 11000000 INFO @ Sun, 03 Jun 2018 15:00:15: 11000000 INFO @ Sun, 03 Jun 2018 15:00:17: 11000000 INFO @ Sun, 03 Jun 2018 15:00:19: 12000000 INFO @ Sun, 03 Jun 2018 15:00:23: 12000000 INFO @ Sun, 03 Jun 2018 15:00:25: 12000000 INFO @ Sun, 03 Jun 2018 15:00:26: 13000000 INFO @ Sun, 03 Jun 2018 15:00:31: 13000000 INFO @ Sun, 03 Jun 2018 15:00:33: 13000000 INFO @ Sun, 03 Jun 2018 15:00:34: 14000000 INFO @ Sun, 03 Jun 2018 15:00:38: 14000000 INFO @ Sun, 03 Jun 2018 15:00:41: 15000000 INFO @ Sun, 03 Jun 2018 15:00:41: 14000000 INFO @ Sun, 03 Jun 2018 15:00:46: 15000000 INFO @ Sun, 03 Jun 2018 15:00:48: 16000000 INFO @ Sun, 03 Jun 2018 15:00:49: 15000000 INFO @ Sun, 03 Jun 2018 15:00:53: 16000000 INFO @ Sun, 03 Jun 2018 15:00:56: 17000000 INFO @ Sun, 03 Jun 2018 15:00:57: 16000000 INFO @ Sun, 03 Jun 2018 15:01:01: 17000000 INFO @ Sun, 03 Jun 2018 15:01:03: 18000000 INFO @ Sun, 03 Jun 2018 15:01:05: 17000000 INFO @ Sun, 03 Jun 2018 15:01:09: 18000000 INFO @ Sun, 03 Jun 2018 15:01:10: 19000000 INFO @ Sun, 03 Jun 2018 15:01:13: 18000000 INFO @ Sun, 03 Jun 2018 15:01:16: 19000000 INFO @ Sun, 03 Jun 2018 15:01:17: 20000000 INFO @ Sun, 03 Jun 2018 15:01:20: 19000000 INFO @ Sun, 03 Jun 2018 15:01:23: 20000000 INFO @ Sun, 03 Jun 2018 15:01:25: 21000000 INFO @ Sun, 03 Jun 2018 15:01:28: 20000000 INFO @ Sun, 03 Jun 2018 15:01:31: 21000000 INFO @ Sun, 03 Jun 2018 15:01:32: 22000000 INFO @ Sun, 03 Jun 2018 15:01:37: 21000000 INFO @ Sun, 03 Jun 2018 15:01:38: 22000000 INFO @ Sun, 03 Jun 2018 15:01:40: 23000000 INFO @ Sun, 03 Jun 2018 15:01:45: 22000000 INFO @ Sun, 03 Jun 2018 15:01:46: 23000000 INFO @ Sun, 03 Jun 2018 15:01:48: 24000000 INFO @ Sun, 03 Jun 2018 15:01:53: 23000000 INFO @ Sun, 03 Jun 2018 15:01:53: 24000000 INFO @ Sun, 03 Jun 2018 15:01:55: 25000000 INFO @ Sun, 03 Jun 2018 15:02:00: 25000000 INFO @ Sun, 03 Jun 2018 15:02:01: 24000000 INFO @ Sun, 03 Jun 2018 15:02:03: 26000000 INFO @ Sun, 03 Jun 2018 15:02:08: 26000000 INFO @ Sun, 03 Jun 2018 15:02:09: 25000000 INFO @ Sun, 03 Jun 2018 15:02:10: 27000000 INFO @ Sun, 03 Jun 2018 15:02:15: 27000000 INFO @ Sun, 03 Jun 2018 15:02:17: 26000000 INFO @ Sun, 03 Jun 2018 15:02:18: 28000000 INFO @ Sun, 03 Jun 2018 15:02:22: 28000000 INFO @ Sun, 03 Jun 2018 15:02:25: 27000000 INFO @ Sun, 03 Jun 2018 15:02:26: 29000000 INFO @ Sun, 03 Jun 2018 15:02:30: 29000000 INFO @ Sun, 03 Jun 2018 15:02:33: 30000000 INFO @ Sun, 03 Jun 2018 15:02:34: 28000000 INFO @ Sun, 03 Jun 2018 15:02:37: 30000000 INFO @ Sun, 03 Jun 2018 15:02:41: 31000000 INFO @ Sun, 03 Jun 2018 15:02:42: 29000000 INFO @ Sun, 03 Jun 2018 15:02:44: 31000000 INFO @ Sun, 03 Jun 2018 15:02:48: 32000000 INFO @ Sun, 03 Jun 2018 15:02:50: 30000000 INFO @ Sun, 03 Jun 2018 15:02:52: 32000000 INFO @ Sun, 03 Jun 2018 15:02:56: 33000000 INFO @ Sun, 03 Jun 2018 15:02:58: 31000000 INFO @ Sun, 03 Jun 2018 15:02:59: 33000000 INFO @ Sun, 03 Jun 2018 15:03:04: 34000000 INFO @ Sun, 03 Jun 2018 15:03:06: 34000000 INFO @ Sun, 03 Jun 2018 15:03:06: 32000000 INFO @ Sun, 03 Jun 2018 15:03:12: 35000000 INFO @ Sun, 03 Jun 2018 15:03:13: 35000000 INFO @ Sun, 03 Jun 2018 15:03:15: 33000000 INFO @ Sun, 03 Jun 2018 15:03:20: 36000000 INFO @ Sun, 03 Jun 2018 15:03:20: 36000000 INFO @ Sun, 03 Jun 2018 15:03:23: 34000000 INFO @ Sun, 03 Jun 2018 15:03:27: 37000000 INFO @ Sun, 03 Jun 2018 15:03:28: 37000000 INFO @ Sun, 03 Jun 2018 15:03:31: 35000000 INFO @ Sun, 03 Jun 2018 15:03:34: 38000000 INFO @ Sun, 03 Jun 2018 15:03:35: 38000000 INFO @ Sun, 03 Jun 2018 15:03:40: 36000000 INFO @ Sun, 03 Jun 2018 15:03:41: 39000000 INFO @ Sun, 03 Jun 2018 15:03:43: 39000000 INFO @ Sun, 03 Jun 2018 15:03:48: 40000000 INFO @ Sun, 03 Jun 2018 15:03:48: 37000000 INFO @ Sun, 03 Jun 2018 15:03:51: 40000000 INFO @ Sun, 03 Jun 2018 15:03:56: 41000000 INFO @ Sun, 03 Jun 2018 15:03:57: 38000000 INFO @ Sun, 03 Jun 2018 15:03:59: 41000000 INFO @ Sun, 03 Jun 2018 15:04:03: 42000000 INFO @ Sun, 03 Jun 2018 15:04:05: 39000000 INFO @ Sun, 03 Jun 2018 15:04:07: 42000000 INFO @ Sun, 03 Jun 2018 15:04:10: 43000000 INFO @ Sun, 03 Jun 2018 15:04:14: 40000000 INFO @ Sun, 03 Jun 2018 15:04:14: 43000000 INFO @ Sun, 03 Jun 2018 15:04:17: 44000000 INFO @ Sun, 03 Jun 2018 15:04:22: 44000000 INFO @ Sun, 03 Jun 2018 15:04:22: 41000000 INFO @ Sun, 03 Jun 2018 15:04:24: 45000000 INFO @ Sun, 03 Jun 2018 15:04:30: 45000000 INFO @ Sun, 03 Jun 2018 15:04:31: 42000000 INFO @ Sun, 03 Jun 2018 15:04:31: 46000000 INFO @ Sun, 03 Jun 2018 15:04:38: 46000000 INFO @ Sun, 03 Jun 2018 15:04:38: 47000000 INFO @ Sun, 03 Jun 2018 15:04:39: 43000000 INFO @ Sun, 03 Jun 2018 15:04:45: 47000000 INFO @ Sun, 03 Jun 2018 15:04:46: 48000000 INFO @ Sun, 03 Jun 2018 15:04:48: 44000000 INFO @ Sun, 03 Jun 2018 15:04:53: 48000000 INFO @ Sun, 03 Jun 2018 15:04:53: 49000000 INFO @ Sun, 03 Jun 2018 15:04:56: 45000000 INFO @ Sun, 03 Jun 2018 15:05:00: 50000000 INFO @ Sun, 03 Jun 2018 15:05:00: 49000000 INFO @ Sun, 03 Jun 2018 15:05:05: 46000000 INFO @ Sun, 03 Jun 2018 15:05:07: 51000000 INFO @ Sun, 03 Jun 2018 15:05:08: 50000000 INFO @ Sun, 03 Jun 2018 15:05:13: 47000000 INFO @ Sun, 03 Jun 2018 15:05:14: 52000000 INFO @ Sun, 03 Jun 2018 15:05:16: 51000000 INFO @ Sun, 03 Jun 2018 15:05:21: 48000000 INFO @ Sun, 03 Jun 2018 15:05:22: 53000000 INFO @ Sun, 03 Jun 2018 15:05:24: 52000000 INFO @ Sun, 03 Jun 2018 15:05:29: 54000000 INFO @ Sun, 03 Jun 2018 15:05:29: 49000000 INFO @ Sun, 03 Jun 2018 15:05:32: 53000000 INFO @ Sun, 03 Jun 2018 15:05:36: 55000000 INFO @ Sun, 03 Jun 2018 15:05:37: 50000000 INFO @ Sun, 03 Jun 2018 15:05:40: 54000000 INFO @ Sun, 03 Jun 2018 15:05:43: 56000000 INFO @ Sun, 03 Jun 2018 15:05:46: 51000000 INFO @ Sun, 03 Jun 2018 15:05:48: 55000000 INFO @ Sun, 03 Jun 2018 15:05:50: 57000000 INFO @ Sun, 03 Jun 2018 15:05:55: 52000000 INFO @ Sun, 03 Jun 2018 15:05:55: 56000000 INFO @ Sun, 03 Jun 2018 15:05:58: 58000000 INFO @ Sun, 03 Jun 2018 15:06:03: 57000000 INFO @ Sun, 03 Jun 2018 15:06:03: 53000000 INFO @ Sun, 03 Jun 2018 15:06:05: 59000000 INFO @ Sun, 03 Jun 2018 15:06:11: 58000000 INFO @ Sun, 03 Jun 2018 15:06:11: 54000000 INFO @ Sun, 03 Jun 2018 15:06:12: 60000000 INFO @ Sun, 03 Jun 2018 15:06:19: 59000000 INFO @ Sun, 03 Jun 2018 15:06:19: 61000000 INFO @ Sun, 03 Jun 2018 15:06:20: 55000000 INFO @ Sun, 03 Jun 2018 15:06:26: 62000000 INFO @ Sun, 03 Jun 2018 15:06:27: 60000000 INFO @ Sun, 03 Jun 2018 15:06:28: 56000000 INFO @ Sun, 03 Jun 2018 15:06:33: 63000000 INFO @ Sun, 03 Jun 2018 15:06:35: 61000000 INFO @ Sun, 03 Jun 2018 15:06:36: 57000000 INFO @ Sun, 03 Jun 2018 15:06:40: 64000000 INFO @ Sun, 03 Jun 2018 15:06:42: 62000000 INFO @ Sun, 03 Jun 2018 15:06:45: 58000000 INFO @ Sun, 03 Jun 2018 15:06:47: 65000000 INFO @ Sun, 03 Jun 2018 15:06:50: 63000000 INFO @ Sun, 03 Jun 2018 15:06:54: 59000000 INFO @ Sun, 03 Jun 2018 15:06:54: 66000000 INFO @ Sun, 03 Jun 2018 15:06:58: 64000000 INFO @ Sun, 03 Jun 2018 15:07:01: 67000000 INFO @ Sun, 03 Jun 2018 15:07:02: 60000000 INFO @ Sun, 03 Jun 2018 15:07:06: 65000000 INFO @ Sun, 03 Jun 2018 15:07:09: 68000000 INFO @ Sun, 03 Jun 2018 15:07:11: 61000000 INFO @ Sun, 03 Jun 2018 15:07:13: 66000000 INFO @ Sun, 03 Jun 2018 15:07:16: 69000000 INFO @ Sun, 03 Jun 2018 15:07:19: 62000000 INFO @ Sun, 03 Jun 2018 15:07:21: 67000000 INFO @ Sun, 03 Jun 2018 15:07:23: 70000000 INFO @ Sun, 03 Jun 2018 15:07:27: 63000000 INFO @ Sun, 03 Jun 2018 15:07:29: 68000000 INFO @ Sun, 03 Jun 2018 15:07:30: 71000000 INFO @ Sun, 03 Jun 2018 15:07:36: 64000000 INFO @ Sun, 03 Jun 2018 15:07:37: 72000000 INFO @ Sun, 03 Jun 2018 15:07:37: 69000000 INFO @ Sun, 03 Jun 2018 15:07:44: 73000000 INFO @ Sun, 03 Jun 2018 15:07:44: 65000000 INFO @ Sun, 03 Jun 2018 15:07:45: 70000000 INFO @ Sun, 03 Jun 2018 15:07:52: 71000000 INFO @ Sun, 03 Jun 2018 15:07:52: 74000000 INFO @ Sun, 03 Jun 2018 15:07:52: 66000000 INFO @ Sun, 03 Jun 2018 15:07:59: 72000000 INFO @ Sun, 03 Jun 2018 15:08:00: 67000000 INFO @ Sun, 03 Jun 2018 15:08:01: 75000000 INFO @ Sun, 03 Jun 2018 15:08:06: 73000000 INFO @ Sun, 03 Jun 2018 15:08:08: 68000000 INFO @ Sun, 03 Jun 2018 15:08:09: 76000000 INFO @ Sun, 03 Jun 2018 15:08:14: 74000000 INFO @ Sun, 03 Jun 2018 15:08:16: 69000000 INFO @ Sun, 03 Jun 2018 15:08:17: 77000000 INFO @ Sun, 03 Jun 2018 15:08:21: 75000000 INFO @ Sun, 03 Jun 2018 15:08:23: 70000000 INFO @ Sun, 03 Jun 2018 15:08:26: 78000000 INFO @ Sun, 03 Jun 2018 15:08:28: 76000000 INFO @ Sun, 03 Jun 2018 15:08:31: 71000000 INFO @ Sun, 03 Jun 2018 15:08:34: 79000000 INFO @ Sun, 03 Jun 2018 15:08:36: 77000000 INFO @ Sun, 03 Jun 2018 15:08:39: 72000000 INFO @ Sun, 03 Jun 2018 15:08:42: 80000000 INFO @ Sun, 03 Jun 2018 15:08:43: 78000000 INFO @ Sun, 03 Jun 2018 15:08:47: 73000000 INFO @ Sun, 03 Jun 2018 15:08:50: 79000000 INFO @ Sun, 03 Jun 2018 15:08:51: 81000000 INFO @ Sun, 03 Jun 2018 15:08:55: 74000000 INFO @ Sun, 03 Jun 2018 15:08:57: 80000000 INFO @ Sun, 03 Jun 2018 15:08:59: 82000000 INFO @ Sun, 03 Jun 2018 15:09:03: 75000000 INFO @ Sun, 03 Jun 2018 15:09:05: 81000000 INFO @ Sun, 03 Jun 2018 15:09:07: 83000000 INFO @ Sun, 03 Jun 2018 15:09:11: 76000000 INFO @ Sun, 03 Jun 2018 15:09:12: 82000000 INFO @ Sun, 03 Jun 2018 15:09:15: 84000000 INFO @ Sun, 03 Jun 2018 15:09:18: 77000000 INFO @ Sun, 03 Jun 2018 15:09:19: 83000000 INFO @ Sun, 03 Jun 2018 15:09:24: 85000000 INFO @ Sun, 03 Jun 2018 15:09:26: 78000000 INFO @ Sun, 03 Jun 2018 15:09:26: 84000000 INFO @ Sun, 03 Jun 2018 15:09:32: 86000000 INFO @ Sun, 03 Jun 2018 15:09:33: 85000000 INFO @ Sun, 03 Jun 2018 15:09:34: 79000000 INFO @ Sun, 03 Jun 2018 15:09:40: 87000000 INFO @ Sun, 03 Jun 2018 15:09:41: 86000000 INFO @ Sun, 03 Jun 2018 15:09:42: 80000000 INFO @ Sun, 03 Jun 2018 15:09:48: 87000000 INFO @ Sun, 03 Jun 2018 15:09:49: 88000000 INFO @ Sun, 03 Jun 2018 15:09:50: 81000000 INFO @ Sun, 03 Jun 2018 15:09:55: 88000000 INFO @ Sun, 03 Jun 2018 15:09:57: 89000000 INFO @ Sun, 03 Jun 2018 15:09:58: 82000000 INFO @ Sun, 03 Jun 2018 15:10:02: 89000000 INFO @ Sun, 03 Jun 2018 15:10:05: 90000000 INFO @ Sun, 03 Jun 2018 15:10:06: 83000000 INFO @ Sun, 03 Jun 2018 15:10:10: 90000000 INFO @ Sun, 03 Jun 2018 15:10:14: 84000000 INFO @ Sun, 03 Jun 2018 15:10:14: 91000000 INFO @ Sun, 03 Jun 2018 15:10:17: 91000000 INFO @ Sun, 03 Jun 2018 15:10:22: 85000000 INFO @ Sun, 03 Jun 2018 15:10:22: 92000000 INFO @ Sun, 03 Jun 2018 15:10:24: 92000000 INFO @ Sun, 03 Jun 2018 15:10:30: 86000000 INFO @ Sun, 03 Jun 2018 15:10:31: 93000000 INFO @ Sun, 03 Jun 2018 15:10:31: 93000000 INFO @ Sun, 03 Jun 2018 15:10:38: 87000000 INFO @ Sun, 03 Jun 2018 15:10:39: 94000000 INFO @ Sun, 03 Jun 2018 15:10:39: 94000000 INFO @ Sun, 03 Jun 2018 15:10:46: 88000000 INFO @ Sun, 03 Jun 2018 15:10:46: 95000000 INFO @ Sun, 03 Jun 2018 15:10:47: 95000000 INFO @ Sun, 03 Jun 2018 15:10:53: 96000000 INFO @ Sun, 03 Jun 2018 15:10:54: 89000000 INFO @ Sun, 03 Jun 2018 15:10:56: 96000000 INFO @ Sun, 03 Jun 2018 15:11:00: 97000000 INFO @ Sun, 03 Jun 2018 15:11:02: 90000000 INFO @ Sun, 03 Jun 2018 15:11:06: 97000000 INFO @ Sun, 03 Jun 2018 15:11:07: 98000000 INFO @ Sun, 03 Jun 2018 15:11:10: 91000000 INFO @ Sun, 03 Jun 2018 15:11:14: 99000000 INFO @ Sun, 03 Jun 2018 15:11:15: 98000000 INFO @ Sun, 03 Jun 2018 15:11:19: 92000000 INFO @ Sun, 03 Jun 2018 15:11:22: 100000000 INFO @ Sun, 03 Jun 2018 15:11:25: 99000000 INFO @ Sun, 03 Jun 2018 15:11:28: 93000000 INFO @ Sun, 03 Jun 2018 15:11:29: 101000000 INFO @ Sun, 03 Jun 2018 15:11:34: 100000000 INFO @ Sun, 03 Jun 2018 15:11:36: 94000000 INFO @ Sun, 03 Jun 2018 15:11:36: 102000000 INFO @ Sun, 03 Jun 2018 15:11:43: 103000000 INFO @ Sun, 03 Jun 2018 15:11:44: 101000000 INFO @ Sun, 03 Jun 2018 15:11:44: 95000000 INFO @ Sun, 03 Jun 2018 15:11:51: 104000000 INFO @ Sun, 03 Jun 2018 15:11:52: 102000000 INFO @ Sun, 03 Jun 2018 15:11:53: 96000000 INFO @ Sun, 03 Jun 2018 15:11:59: 105000000 INFO @ Sun, 03 Jun 2018 15:12:00: 103000000 INFO @ Sun, 03 Jun 2018 15:12:02: 97000000 INFO @ Sun, 03 Jun 2018 15:12:07: 106000000 INFO @ Sun, 03 Jun 2018 15:12:09: 104000000 INFO @ Sun, 03 Jun 2018 15:12:11: 98000000 INFO @ Sun, 03 Jun 2018 15:12:14: 107000000 INFO @ Sun, 03 Jun 2018 15:12:17: 105000000 INFO @ Sun, 03 Jun 2018 15:12:20: 99000000 INFO @ Sun, 03 Jun 2018 15:12:22: 108000000 INFO @ Sun, 03 Jun 2018 15:12:25: 106000000 INFO @ Sun, 03 Jun 2018 15:12:29: 100000000 INFO @ Sun, 03 Jun 2018 15:12:30: 109000000 INFO @ Sun, 03 Jun 2018 15:12:34: 107000000 INFO @ Sun, 03 Jun 2018 15:12:38: 101000000 INFO @ Sun, 03 Jun 2018 15:12:38: 110000000 INFO @ Sun, 03 Jun 2018 15:12:42: 108000000 INFO @ Sun, 03 Jun 2018 15:12:46: 111000000 INFO @ Sun, 03 Jun 2018 15:12:47: 102000000 INFO @ Sun, 03 Jun 2018 15:12:50: 109000000 INFO @ Sun, 03 Jun 2018 15:12:54: 112000000 INFO @ Sun, 03 Jun 2018 15:12:55: 103000000 INFO @ Sun, 03 Jun 2018 15:12:59: 110000000 INFO @ Sun, 03 Jun 2018 15:13:02: 113000000 INFO @ Sun, 03 Jun 2018 15:13:04: 104000000 INFO @ Sun, 03 Jun 2018 15:13:07: 111000000 INFO @ Sun, 03 Jun 2018 15:13:10: 114000000 INFO @ Sun, 03 Jun 2018 15:13:13: 105000000 INFO @ Sun, 03 Jun 2018 15:13:15: 112000000 INFO @ Sun, 03 Jun 2018 15:13:18: 115000000 INFO @ Sun, 03 Jun 2018 15:13:22: 106000000 INFO @ Sun, 03 Jun 2018 15:13:24: 113000000 INFO @ Sun, 03 Jun 2018 15:13:25: 116000000 INFO @ Sun, 03 Jun 2018 15:13:31: 107000000 INFO @ Sun, 03 Jun 2018 15:13:32: 114000000 INFO @ Sun, 03 Jun 2018 15:13:33: 117000000 INFO @ Sun, 03 Jun 2018 15:13:40: 108000000 INFO @ Sun, 03 Jun 2018 15:13:40: 118000000 INFO @ Sun, 03 Jun 2018 15:13:40: 115000000 INFO @ Sun, 03 Jun 2018 15:13:44: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 15:13:44: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 15:13:44: #1 total tags in treatment: 58143491 INFO @ Sun, 03 Jun 2018 15:13:44: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 15:13:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 15:13:46: #1 tags after filtering in treatment: 39164023 INFO @ Sun, 03 Jun 2018 15:13:46: #1 Redundant rate of treatment: 0.33 INFO @ Sun, 03 Jun 2018 15:13:46: #1 finished! INFO @ Sun, 03 Jun 2018 15:13:46: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 15:13:46: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 15:13:48: 109000000 INFO @ Sun, 03 Jun 2018 15:13:48: 116000000 INFO @ Sun, 03 Jun 2018 15:13:48: #2 number of paired peaks: 0 WARNING @ Sun, 03 Jun 2018 15:13:48: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 15:13:48: Process for pairing-model is terminated! cat: SRX4085404.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085404.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085404.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085404.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 15:13:55: 110000000 INFO @ Sun, 03 Jun 2018 15:13:56: 117000000 INFO @ Sun, 03 Jun 2018 15:14:03: 111000000 INFO @ Sun, 03 Jun 2018 15:14:03: 118000000 INFO @ Sun, 03 Jun 2018 15:14:08: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 15:14:08: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 15:14:08: #1 total tags in treatment: 58143491 INFO @ Sun, 03 Jun 2018 15:14:08: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 15:14:08: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 15:14:09: #1 tags after filtering in treatment: 39164023 INFO @ Sun, 03 Jun 2018 15:14:09: #1 Redundant rate of treatment: 0.33 INFO @ Sun, 03 Jun 2018 15:14:09: #1 finished! INFO @ Sun, 03 Jun 2018 15:14:09: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 15:14:09: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 15:14:10: 112000000 INFO @ Sun, 03 Jun 2018 15:14:12: #2 number of paired peaks: 0 WARNING @ Sun, 03 Jun 2018 15:14:12: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 15:14:12: Process for pairing-model is terminated! cat: SRX4085404.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085404.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085404.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085404.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 15:14:17: 113000000 INFO @ Sun, 03 Jun 2018 15:14:25: 114000000 INFO @ Sun, 03 Jun 2018 15:14:32: 115000000 INFO @ Sun, 03 Jun 2018 15:14:39: 116000000 INFO @ Sun, 03 Jun 2018 15:14:46: 117000000 INFO @ Sun, 03 Jun 2018 15:14:53: 118000000 INFO @ Sun, 03 Jun 2018 15:14:57: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 15:14:57: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 15:14:57: #1 total tags in treatment: 58143491 INFO @ Sun, 03 Jun 2018 15:14:57: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 15:14:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 15:14:58: #1 tags after filtering in treatment: 39164023 INFO @ Sun, 03 Jun 2018 15:14:58: #1 Redundant rate of treatment: 0.33 INFO @ Sun, 03 Jun 2018 15:14:58: #1 finished! INFO @ Sun, 03 Jun 2018 15:14:58: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 15:14:58: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 15:15:01: #2 number of paired peaks: 0 WARNING @ Sun, 03 Jun 2018 15:15:01: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 15:15:01: Process for pairing-model is terminated! cat: SRX4085404.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085404.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085404.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085404.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。