Job ID = 10714443 sra ファイルのダウンロード中... Completed: 2270432K bytes transferred in 40 seconds (459305K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 31585738 spots for /home/okishinya/chipatlas/results/ce10/SRX4085359/SRR7167388.sra Written 31585738 spots for /home/okishinya/chipatlas/results/ce10/SRX4085359/SRR7167388.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:33:13 31585738 reads; of these: 31585738 (100.00%) were paired; of these: 1259670 (3.99%) aligned concordantly 0 times 26290765 (83.24%) aligned concordantly exactly 1 time 4035303 (12.78%) aligned concordantly >1 times ---- 1259670 pairs aligned concordantly 0 times; of these: 222827 (17.69%) aligned discordantly 1 time ---- 1036843 pairs aligned 0 times concordantly or discordantly; of these: 2073686 mates make up the pairs; of these: 1238764 (59.74%) aligned 0 times 639835 (30.85%) aligned exactly 1 time 195087 (9.41%) aligned >1 times 98.04% overall alignment rate Time searching: 00:33:13 Overall time: 00:33:13 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 5067427 / 30454723 = 0.1664 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 03 Jun 2018 13:31:02: # Command line: callpeak -t SRX4085359.bam -f BAM -g ce -n SRX4085359.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX4085359.05 # format = BAM # ChIP-seq file = ['SRX4085359.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 13:31:02: # Command line: callpeak -t SRX4085359.bam -f BAM -g ce -n SRX4085359.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX4085359.10 # format = BAM # ChIP-seq file = ['SRX4085359.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 13:31:02: # Command line: callpeak -t SRX4085359.bam -f BAM -g ce -n SRX4085359.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX4085359.20 # format = BAM # ChIP-seq file = ['SRX4085359.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 13:31:02: #1 read tag files... INFO @ Sun, 03 Jun 2018 13:31:02: #1 read tag files... INFO @ Sun, 03 Jun 2018 13:31:02: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 13:31:02: #1 read tag files... INFO @ Sun, 03 Jun 2018 13:31:02: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 13:31:02: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 13:31:08: 1000000 INFO @ Sun, 03 Jun 2018 13:31:08: 1000000 INFO @ Sun, 03 Jun 2018 13:31:08: 1000000 INFO @ Sun, 03 Jun 2018 13:31:14: 2000000 INFO @ Sun, 03 Jun 2018 13:31:15: 2000000 INFO @ Sun, 03 Jun 2018 13:31:15: 2000000 INFO @ Sun, 03 Jun 2018 13:31:19: 3000000 INFO @ Sun, 03 Jun 2018 13:31:21: 3000000 INFO @ Sun, 03 Jun 2018 13:31:21: 3000000 INFO @ Sun, 03 Jun 2018 13:31:25: 4000000 INFO @ Sun, 03 Jun 2018 13:31:27: 4000000 INFO @ Sun, 03 Jun 2018 13:31:27: 4000000 INFO @ Sun, 03 Jun 2018 13:31:31: 5000000 INFO @ Sun, 03 Jun 2018 13:31:33: 5000000 INFO @ Sun, 03 Jun 2018 13:31:33: 5000000 INFO @ Sun, 03 Jun 2018 13:31:36: 6000000 INFO @ Sun, 03 Jun 2018 13:31:39: 6000000 INFO @ Sun, 03 Jun 2018 13:31:39: 6000000 INFO @ Sun, 03 Jun 2018 13:31:42: 7000000 INFO @ Sun, 03 Jun 2018 13:31:45: 7000000 INFO @ Sun, 03 Jun 2018 13:31:45: 7000000 INFO @ Sun, 03 Jun 2018 13:31:48: 8000000 INFO @ Sun, 03 Jun 2018 13:31:51: 8000000 INFO @ Sun, 03 Jun 2018 13:31:51: 8000000 INFO @ Sun, 03 Jun 2018 13:31:53: 9000000 INFO @ Sun, 03 Jun 2018 13:31:57: 9000000 INFO @ Sun, 03 Jun 2018 13:31:57: 9000000 INFO @ Sun, 03 Jun 2018 13:31:59: 10000000 INFO @ Sun, 03 Jun 2018 13:32:03: 10000000 INFO @ Sun, 03 Jun 2018 13:32:03: 10000000 INFO @ Sun, 03 Jun 2018 13:32:05: 11000000 INFO @ Sun, 03 Jun 2018 13:32:09: 11000000 INFO @ Sun, 03 Jun 2018 13:32:09: 11000000 INFO @ Sun, 03 Jun 2018 13:32:10: 12000000 INFO @ Sun, 03 Jun 2018 13:32:15: 12000000 INFO @ Sun, 03 Jun 2018 13:32:15: 12000000 INFO @ Sun, 03 Jun 2018 13:32:16: 13000000 INFO @ Sun, 03 Jun 2018 13:32:21: 13000000 INFO @ Sun, 03 Jun 2018 13:32:21: 13000000 INFO @ Sun, 03 Jun 2018 13:32:22: 14000000 INFO @ Sun, 03 Jun 2018 13:32:27: 14000000 INFO @ Sun, 03 Jun 2018 13:32:27: 14000000 INFO @ Sun, 03 Jun 2018 13:32:27: 15000000 INFO @ Sun, 03 Jun 2018 13:32:33: 15000000 INFO @ Sun, 03 Jun 2018 13:32:33: 15000000 INFO @ Sun, 03 Jun 2018 13:32:33: 16000000 INFO @ Sun, 03 Jun 2018 13:32:39: 17000000 INFO @ Sun, 03 Jun 2018 13:32:39: 16000000 INFO @ Sun, 03 Jun 2018 13:32:39: 16000000 INFO @ Sun, 03 Jun 2018 13:32:44: 18000000 INFO @ Sun, 03 Jun 2018 13:32:45: 17000000 INFO @ Sun, 03 Jun 2018 13:32:45: 17000000 INFO @ Sun, 03 Jun 2018 13:32:50: 19000000 INFO @ Sun, 03 Jun 2018 13:32:51: 18000000 INFO @ Sun, 03 Jun 2018 13:32:51: 18000000 INFO @ Sun, 03 Jun 2018 13:32:56: 20000000 INFO @ Sun, 03 Jun 2018 13:32:57: 19000000 INFO @ Sun, 03 Jun 2018 13:32:57: 19000000 INFO @ Sun, 03 Jun 2018 13:33:01: 21000000 INFO @ Sun, 03 Jun 2018 13:33:03: 20000000 INFO @ Sun, 03 Jun 2018 13:33:03: 20000000 INFO @ Sun, 03 Jun 2018 13:33:07: 22000000 INFO @ Sun, 03 Jun 2018 13:33:09: 21000000 INFO @ Sun, 03 Jun 2018 13:33:09: 21000000 INFO @ Sun, 03 Jun 2018 13:33:13: 23000000 INFO @ Sun, 03 Jun 2018 13:33:15: 22000000 INFO @ Sun, 03 Jun 2018 13:33:15: 22000000 INFO @ Sun, 03 Jun 2018 13:33:18: 24000000 INFO @ Sun, 03 Jun 2018 13:33:21: 23000000 INFO @ Sun, 03 Jun 2018 13:33:21: 23000000 INFO @ Sun, 03 Jun 2018 13:33:24: 25000000 INFO @ Sun, 03 Jun 2018 13:33:27: 24000000 INFO @ Sun, 03 Jun 2018 13:33:27: 24000000 INFO @ Sun, 03 Jun 2018 13:33:30: 26000000 INFO @ Sun, 03 Jun 2018 13:33:33: 25000000 INFO @ Sun, 03 Jun 2018 13:33:33: 25000000 INFO @ Sun, 03 Jun 2018 13:33:35: 27000000 INFO @ Sun, 03 Jun 2018 13:33:39: 26000000 INFO @ Sun, 03 Jun 2018 13:33:39: 26000000 INFO @ Sun, 03 Jun 2018 13:33:41: 28000000 INFO @ Sun, 03 Jun 2018 13:33:45: 27000000 INFO @ Sun, 03 Jun 2018 13:33:45: 27000000 INFO @ Sun, 03 Jun 2018 13:33:46: 29000000 INFO @ Sun, 03 Jun 2018 13:33:51: 28000000 INFO @ Sun, 03 Jun 2018 13:33:51: 28000000 INFO @ Sun, 03 Jun 2018 13:33:52: 30000000 INFO @ Sun, 03 Jun 2018 13:33:57: 29000000 INFO @ Sun, 03 Jun 2018 13:33:58: 29000000 INFO @ Sun, 03 Jun 2018 13:33:58: 31000000 INFO @ Sun, 03 Jun 2018 13:34:03: 30000000 INFO @ Sun, 03 Jun 2018 13:34:03: 32000000 INFO @ Sun, 03 Jun 2018 13:34:04: 30000000 INFO @ Sun, 03 Jun 2018 13:34:09: 33000000 INFO @ Sun, 03 Jun 2018 13:34:10: 31000000 INFO @ Sun, 03 Jun 2018 13:34:10: 31000000 INFO @ Sun, 03 Jun 2018 13:34:15: 34000000 INFO @ Sun, 03 Jun 2018 13:34:16: 32000000 INFO @ Sun, 03 Jun 2018 13:34:16: 32000000 INFO @ Sun, 03 Jun 2018 13:34:20: 35000000 INFO @ Sun, 03 Jun 2018 13:34:22: 33000000 INFO @ Sun, 03 Jun 2018 13:34:23: 33000000 INFO @ Sun, 03 Jun 2018 13:34:26: 36000000 INFO @ Sun, 03 Jun 2018 13:34:29: 34000000 INFO @ Sun, 03 Jun 2018 13:34:29: 34000000 INFO @ Sun, 03 Jun 2018 13:34:32: 37000000 INFO @ Sun, 03 Jun 2018 13:34:35: 35000000 INFO @ Sun, 03 Jun 2018 13:34:36: 35000000 INFO @ Sun, 03 Jun 2018 13:34:37: 38000000 INFO @ Sun, 03 Jun 2018 13:34:42: 36000000 INFO @ Sun, 03 Jun 2018 13:34:42: 36000000 INFO @ Sun, 03 Jun 2018 13:34:43: 39000000 INFO @ Sun, 03 Jun 2018 13:34:48: 37000000 INFO @ Sun, 03 Jun 2018 13:34:49: 40000000 INFO @ Sun, 03 Jun 2018 13:34:49: 37000000 INFO @ Sun, 03 Jun 2018 13:34:54: 41000000 INFO @ Sun, 03 Jun 2018 13:34:55: 38000000 INFO @ Sun, 03 Jun 2018 13:34:56: 38000000 INFO @ Sun, 03 Jun 2018 13:35:00: 42000000 INFO @ Sun, 03 Jun 2018 13:35:01: 39000000 INFO @ Sun, 03 Jun 2018 13:35:02: 39000000 INFO @ Sun, 03 Jun 2018 13:35:05: 43000000 INFO @ Sun, 03 Jun 2018 13:35:08: 40000000 INFO @ Sun, 03 Jun 2018 13:35:09: 40000000 INFO @ Sun, 03 Jun 2018 13:35:11: 44000000 INFO @ Sun, 03 Jun 2018 13:35:14: 41000000 INFO @ Sun, 03 Jun 2018 13:35:15: 41000000 INFO @ Sun, 03 Jun 2018 13:35:17: 45000000 INFO @ Sun, 03 Jun 2018 13:35:21: 42000000 INFO @ Sun, 03 Jun 2018 13:35:22: 42000000 INFO @ Sun, 03 Jun 2018 13:35:22: 46000000 INFO @ Sun, 03 Jun 2018 13:35:27: 43000000 INFO @ Sun, 03 Jun 2018 13:35:28: 47000000 INFO @ Sun, 03 Jun 2018 13:35:28: 43000000 INFO @ Sun, 03 Jun 2018 13:35:34: 48000000 INFO @ Sun, 03 Jun 2018 13:35:34: 44000000 INFO @ Sun, 03 Jun 2018 13:35:35: 44000000 INFO @ Sun, 03 Jun 2018 13:35:39: 49000000 INFO @ Sun, 03 Jun 2018 13:35:40: 45000000 INFO @ Sun, 03 Jun 2018 13:35:42: 45000000 INFO @ Sun, 03 Jun 2018 13:35:45: 50000000 INFO @ Sun, 03 Jun 2018 13:35:47: 46000000 INFO @ Sun, 03 Jun 2018 13:35:48: 46000000 INFO @ Sun, 03 Jun 2018 13:35:50: 51000000 INFO @ Sun, 03 Jun 2018 13:35:53: 47000000 INFO @ Sun, 03 Jun 2018 13:35:55: 47000000 INFO @ Sun, 03 Jun 2018 13:35:55: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 13:35:55: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 13:35:55: #1 total tags in treatment: 25273445 INFO @ Sun, 03 Jun 2018 13:35:55: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 13:35:55: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 13:35:55: #1 tags after filtering in treatment: 20085242 INFO @ Sun, 03 Jun 2018 13:35:55: #1 Redundant rate of treatment: 0.21 INFO @ Sun, 03 Jun 2018 13:35:55: #1 finished! INFO @ Sun, 03 Jun 2018 13:35:55: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 13:35:55: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 13:35:57: #2 number of paired peaks: 142 WARNING @ Sun, 03 Jun 2018 13:35:57: Fewer paired peaks (142) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 142 pairs to build model! INFO @ Sun, 03 Jun 2018 13:35:57: start model_add_line... INFO @ Sun, 03 Jun 2018 13:35:57: start X-correlation... INFO @ Sun, 03 Jun 2018 13:35:57: end of X-cor INFO @ Sun, 03 Jun 2018 13:35:57: #2 finished! INFO @ Sun, 03 Jun 2018 13:35:57: #2 predicted fragment length is 56 bps INFO @ Sun, 03 Jun 2018 13:35:57: #2 alternative fragment length(s) may be 1,56,94,112,138,552 bps INFO @ Sun, 03 Jun 2018 13:35:57: #2.2 Generate R script for model : SRX4085359.20_model.r WARNING @ Sun, 03 Jun 2018 13:35:57: #2 Since the d (56) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 03 Jun 2018 13:35:57: #2 You may need to consider one of the other alternative d(s): 1,56,94,112,138,552 WARNING @ Sun, 03 Jun 2018 13:35:57: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 03 Jun 2018 13:35:57: #3 Call peaks... INFO @ Sun, 03 Jun 2018 13:35:57: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 03 Jun 2018 13:35:59: 48000000 INFO @ Sun, 03 Jun 2018 13:36:01: 48000000 INFO @ Sun, 03 Jun 2018 13:36:06: 49000000 INFO @ Sun, 03 Jun 2018 13:36:08: 49000000 INFO @ Sun, 03 Jun 2018 13:36:12: 50000000 INFO @ Sun, 03 Jun 2018 13:36:14: 50000000 INFO @ Sun, 03 Jun 2018 13:36:19: 51000000 INFO @ Sun, 03 Jun 2018 13:36:21: 51000000 INFO @ Sun, 03 Jun 2018 13:36:24: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 13:36:24: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 13:36:24: #1 total tags in treatment: 25273445 INFO @ Sun, 03 Jun 2018 13:36:24: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 13:36:24: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 13:36:24: #1 tags after filtering in treatment: 20085242 INFO @ Sun, 03 Jun 2018 13:36:24: #1 Redundant rate of treatment: 0.21 INFO @ Sun, 03 Jun 2018 13:36:24: #1 finished! INFO @ Sun, 03 Jun 2018 13:36:24: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 13:36:24: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 13:36:26: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 13:36:26: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 13:36:26: #1 total tags in treatment: 25273445 INFO @ Sun, 03 Jun 2018 13:36:26: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 13:36:26: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 13:36:26: #2 number of paired peaks: 142 WARNING @ Sun, 03 Jun 2018 13:36:26: Fewer paired peaks (142) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 142 pairs to build model! INFO @ Sun, 03 Jun 2018 13:36:26: start model_add_line... INFO @ Sun, 03 Jun 2018 13:36:26: start X-correlation... INFO @ Sun, 03 Jun 2018 13:36:26: end of X-cor INFO @ Sun, 03 Jun 2018 13:36:26: #2 finished! INFO @ Sun, 03 Jun 2018 13:36:26: #2 predicted fragment length is 56 bps INFO @ Sun, 03 Jun 2018 13:36:26: #2 alternative fragment length(s) may be 1,56,94,112,138,552 bps INFO @ Sun, 03 Jun 2018 13:36:26: #2.2 Generate R script for model : SRX4085359.05_model.r WARNING @ Sun, 03 Jun 2018 13:36:26: #2 Since the d (56) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 03 Jun 2018 13:36:26: #2 You may need to consider one of the other alternative d(s): 1,56,94,112,138,552 WARNING @ Sun, 03 Jun 2018 13:36:26: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 03 Jun 2018 13:36:26: #3 Call peaks... INFO @ Sun, 03 Jun 2018 13:36:26: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 03 Jun 2018 13:36:26: #1 tags after filtering in treatment: 20085242 INFO @ Sun, 03 Jun 2018 13:36:26: #1 Redundant rate of treatment: 0.21 INFO @ Sun, 03 Jun 2018 13:36:26: #1 finished! INFO @ Sun, 03 Jun 2018 13:36:26: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 13:36:26: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 13:36:28: #2 number of paired peaks: 142 WARNING @ Sun, 03 Jun 2018 13:36:28: Fewer paired peaks (142) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 142 pairs to build model! INFO @ Sun, 03 Jun 2018 13:36:28: start model_add_line... INFO @ Sun, 03 Jun 2018 13:36:28: start X-correlation... INFO @ Sun, 03 Jun 2018 13:36:28: end of X-cor INFO @ Sun, 03 Jun 2018 13:36:28: #2 finished! INFO @ Sun, 03 Jun 2018 13:36:28: #2 predicted fragment length is 56 bps INFO @ Sun, 03 Jun 2018 13:36:28: #2 alternative fragment length(s) may be 1,56,94,112,138,552 bps INFO @ Sun, 03 Jun 2018 13:36:28: #2.2 Generate R script for model : SRX4085359.10_model.r WARNING @ Sun, 03 Jun 2018 13:36:28: #2 Since the d (56) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 03 Jun 2018 13:36:28: #2 You may need to consider one of the other alternative d(s): 1,56,94,112,138,552 WARNING @ Sun, 03 Jun 2018 13:36:28: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 03 Jun 2018 13:36:28: #3 Call peaks... INFO @ Sun, 03 Jun 2018 13:36:28: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 03 Jun 2018 13:36:34: #3 Call peaks for each chromosome... INFO @ Sun, 03 Jun 2018 13:36:54: #4 Write output xls file... SRX4085359.20_peaks.xls INFO @ Sun, 03 Jun 2018 13:36:54: #4 Write peak in narrowPeak format file... SRX4085359.20_peaks.narrowPeak INFO @ Sun, 03 Jun 2018 13:36:54: #4 Write summits bed file... SRX4085359.20_summits.bed INFO @ Sun, 03 Jun 2018 13:36:54: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (123 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 13:37:05: #3 Call peaks for each chromosome... INFO @ Sun, 03 Jun 2018 13:37:05: #3 Call peaks for each chromosome... INFO @ Sun, 03 Jun 2018 13:37:22: #4 Write output xls file... SRX4085359.10_peaks.xls INFO @ Sun, 03 Jun 2018 13:37:22: #4 Write peak in narrowPeak format file... SRX4085359.10_peaks.narrowPeak INFO @ Sun, 03 Jun 2018 13:37:22: #4 Write summits bed file... SRX4085359.10_summits.bed INFO @ Sun, 03 Jun 2018 13:37:22: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (763 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 13:37:25: #4 Write output xls file... SRX4085359.05_peaks.xls INFO @ Sun, 03 Jun 2018 13:37:25: #4 Write peak in narrowPeak format file... SRX4085359.05_peaks.narrowPeak INFO @ Sun, 03 Jun 2018 13:37:25: #4 Write summits bed file... SRX4085359.05_summits.bed INFO @ Sun, 03 Jun 2018 13:37:25: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (2013 records, 4 fields): 4 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。