Job ID = 10714434 sra ファイルのダウンロード中... Completed: 4492500K bytes transferred in 75 seconds (487223K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 64691051 spots for /home/okishinya/chipatlas/results/ce10/SRX4085350/SRR7167379.sra Written 64691051 spots for /home/okishinya/chipatlas/results/ce10/SRX4085350/SRR7167379.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:03:59 64691051 reads; of these: 64691051 (100.00%) were paired; of these: 7973005 (12.32%) aligned concordantly 0 times 49314116 (76.23%) aligned concordantly exactly 1 time 7403930 (11.45%) aligned concordantly >1 times ---- 7973005 pairs aligned concordantly 0 times; of these: 1873693 (23.50%) aligned discordantly 1 time ---- 6099312 pairs aligned 0 times concordantly or discordantly; of these: 12198624 mates make up the pairs; of these: 7948384 (65.16%) aligned 0 times 3056202 (25.05%) aligned exactly 1 time 1194038 (9.79%) aligned >1 times 93.86% overall alignment rate Time searching: 01:03:59 Overall time: 01:03:59 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 52 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 23264998 / 57081948 = 0.4076 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 03 Jun 2018 14:16:32: # Command line: callpeak -t SRX4085350.bam -f BAM -g ce -n SRX4085350.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX4085350.05 # format = BAM # ChIP-seq file = ['SRX4085350.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:16:32: # Command line: callpeak -t SRX4085350.bam -f BAM -g ce -n SRX4085350.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX4085350.20 # format = BAM # ChIP-seq file = ['SRX4085350.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:16:32: # Command line: callpeak -t SRX4085350.bam -f BAM -g ce -n SRX4085350.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX4085350.10 # format = BAM # ChIP-seq file = ['SRX4085350.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:16:32: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:16:32: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:16:32: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:16:32: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:16:32: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:16:32: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:16:39: 1000000 INFO @ Sun, 03 Jun 2018 14:16:40: 1000000 INFO @ Sun, 03 Jun 2018 14:16:40: 1000000 INFO @ Sun, 03 Jun 2018 14:16:45: 2000000 INFO @ Sun, 03 Jun 2018 14:16:47: 2000000 INFO @ Sun, 03 Jun 2018 14:16:47: 2000000 INFO @ Sun, 03 Jun 2018 14:16:51: 3000000 INFO @ Sun, 03 Jun 2018 14:16:55: 3000000 INFO @ Sun, 03 Jun 2018 14:16:55: 3000000 INFO @ Sun, 03 Jun 2018 14:16:57: 4000000 INFO @ Sun, 03 Jun 2018 14:17:03: 5000000 INFO @ Sun, 03 Jun 2018 14:17:03: 4000000 INFO @ Sun, 03 Jun 2018 14:17:03: 4000000 INFO @ Sun, 03 Jun 2018 14:17:09: 6000000 INFO @ Sun, 03 Jun 2018 14:17:10: 5000000 INFO @ Sun, 03 Jun 2018 14:17:10: 5000000 INFO @ Sun, 03 Jun 2018 14:17:15: 7000000 INFO @ Sun, 03 Jun 2018 14:17:17: 6000000 INFO @ Sun, 03 Jun 2018 14:17:17: 6000000 INFO @ Sun, 03 Jun 2018 14:17:21: 8000000 INFO @ Sun, 03 Jun 2018 14:17:25: 7000000 INFO @ Sun, 03 Jun 2018 14:17:25: 7000000 INFO @ Sun, 03 Jun 2018 14:17:27: 9000000 INFO @ Sun, 03 Jun 2018 14:17:32: 8000000 INFO @ Sun, 03 Jun 2018 14:17:32: 8000000 INFO @ Sun, 03 Jun 2018 14:17:33: 10000000 INFO @ Sun, 03 Jun 2018 14:17:39: 11000000 INFO @ Sun, 03 Jun 2018 14:17:39: 9000000 INFO @ Sun, 03 Jun 2018 14:17:39: 9000000 INFO @ Sun, 03 Jun 2018 14:17:45: 12000000 INFO @ Sun, 03 Jun 2018 14:17:47: 10000000 INFO @ Sun, 03 Jun 2018 14:17:47: 10000000 INFO @ Sun, 03 Jun 2018 14:17:51: 13000000 INFO @ Sun, 03 Jun 2018 14:17:54: 11000000 INFO @ Sun, 03 Jun 2018 14:17:54: 11000000 INFO @ Sun, 03 Jun 2018 14:17:57: 14000000 INFO @ Sun, 03 Jun 2018 14:18:01: 12000000 INFO @ Sun, 03 Jun 2018 14:18:01: 12000000 INFO @ Sun, 03 Jun 2018 14:18:03: 15000000 INFO @ Sun, 03 Jun 2018 14:18:08: 13000000 INFO @ Sun, 03 Jun 2018 14:18:08: 13000000 INFO @ Sun, 03 Jun 2018 14:18:09: 16000000 INFO @ Sun, 03 Jun 2018 14:18:15: 17000000 INFO @ Sun, 03 Jun 2018 14:18:16: 14000000 INFO @ Sun, 03 Jun 2018 14:18:16: 14000000 INFO @ Sun, 03 Jun 2018 14:18:21: 18000000 INFO @ Sun, 03 Jun 2018 14:18:23: 15000000 INFO @ Sun, 03 Jun 2018 14:18:23: 15000000 INFO @ Sun, 03 Jun 2018 14:18:27: 19000000 INFO @ Sun, 03 Jun 2018 14:18:30: 16000000 INFO @ Sun, 03 Jun 2018 14:18:31: 16000000 INFO @ Sun, 03 Jun 2018 14:18:34: 20000000 INFO @ Sun, 03 Jun 2018 14:18:37: 17000000 INFO @ Sun, 03 Jun 2018 14:18:38: 17000000 INFO @ Sun, 03 Jun 2018 14:18:40: 21000000 INFO @ Sun, 03 Jun 2018 14:18:44: 18000000 INFO @ Sun, 03 Jun 2018 14:18:45: 18000000 INFO @ Sun, 03 Jun 2018 14:18:47: 22000000 INFO @ Sun, 03 Jun 2018 14:18:51: 19000000 INFO @ Sun, 03 Jun 2018 14:18:53: 19000000 INFO @ Sun, 03 Jun 2018 14:18:54: 23000000 INFO @ Sun, 03 Jun 2018 14:18:58: 20000000 INFO @ Sun, 03 Jun 2018 14:19:00: 20000000 INFO @ Sun, 03 Jun 2018 14:19:01: 24000000 INFO @ Sun, 03 Jun 2018 14:19:05: 21000000 INFO @ Sun, 03 Jun 2018 14:19:07: 21000000 INFO @ Sun, 03 Jun 2018 14:19:08: 25000000 INFO @ Sun, 03 Jun 2018 14:19:12: 22000000 INFO @ Sun, 03 Jun 2018 14:19:15: 26000000 INFO @ Sun, 03 Jun 2018 14:19:15: 22000000 INFO @ Sun, 03 Jun 2018 14:19:19: 23000000 INFO @ Sun, 03 Jun 2018 14:19:22: 27000000 INFO @ Sun, 03 Jun 2018 14:19:22: 23000000 INFO @ Sun, 03 Jun 2018 14:19:26: 24000000 INFO @ Sun, 03 Jun 2018 14:19:28: 28000000 INFO @ Sun, 03 Jun 2018 14:19:30: 24000000 INFO @ Sun, 03 Jun 2018 14:19:33: 25000000 INFO @ Sun, 03 Jun 2018 14:19:35: 29000000 INFO @ Sun, 03 Jun 2018 14:19:37: 25000000 INFO @ Sun, 03 Jun 2018 14:19:40: 26000000 INFO @ Sun, 03 Jun 2018 14:19:42: 30000000 INFO @ Sun, 03 Jun 2018 14:19:44: 26000000 INFO @ Sun, 03 Jun 2018 14:19:46: 27000000 INFO @ Sun, 03 Jun 2018 14:19:49: 31000000 INFO @ Sun, 03 Jun 2018 14:19:52: 27000000 INFO @ Sun, 03 Jun 2018 14:19:53: 28000000 INFO @ Sun, 03 Jun 2018 14:19:56: 32000000 INFO @ Sun, 03 Jun 2018 14:19:59: 28000000 INFO @ Sun, 03 Jun 2018 14:20:00: 29000000 INFO @ Sun, 03 Jun 2018 14:20:02: 33000000 INFO @ Sun, 03 Jun 2018 14:20:06: 30000000 INFO @ Sun, 03 Jun 2018 14:20:07: 29000000 INFO @ Sun, 03 Jun 2018 14:20:09: 34000000 INFO @ Sun, 03 Jun 2018 14:20:13: 31000000 INFO @ Sun, 03 Jun 2018 14:20:15: 30000000 INFO @ Sun, 03 Jun 2018 14:20:16: 35000000 INFO @ Sun, 03 Jun 2018 14:20:20: 32000000 INFO @ Sun, 03 Jun 2018 14:20:22: 31000000 INFO @ Sun, 03 Jun 2018 14:20:23: 36000000 INFO @ Sun, 03 Jun 2018 14:20:27: 33000000 INFO @ Sun, 03 Jun 2018 14:20:30: 32000000 INFO @ Sun, 03 Jun 2018 14:20:30: 37000000 INFO @ Sun, 03 Jun 2018 14:20:34: 34000000 INFO @ Sun, 03 Jun 2018 14:20:37: 38000000 INFO @ Sun, 03 Jun 2018 14:20:38: 33000000 INFO @ Sun, 03 Jun 2018 14:20:40: 35000000 INFO @ Sun, 03 Jun 2018 14:20:44: 39000000 INFO @ Sun, 03 Jun 2018 14:20:45: 34000000 INFO @ Sun, 03 Jun 2018 14:20:47: 36000000 INFO @ Sun, 03 Jun 2018 14:20:51: 40000000 INFO @ Sun, 03 Jun 2018 14:20:53: 35000000 INFO @ Sun, 03 Jun 2018 14:20:54: 37000000 INFO @ Sun, 03 Jun 2018 14:20:58: 41000000 INFO @ Sun, 03 Jun 2018 14:21:00: 38000000 INFO @ Sun, 03 Jun 2018 14:21:01: 36000000 INFO @ Sun, 03 Jun 2018 14:21:05: 42000000 INFO @ Sun, 03 Jun 2018 14:21:07: 39000000 INFO @ Sun, 03 Jun 2018 14:21:08: 37000000 INFO @ Sun, 03 Jun 2018 14:21:12: 43000000 INFO @ Sun, 03 Jun 2018 14:21:14: 40000000 INFO @ Sun, 03 Jun 2018 14:21:16: 38000000 INFO @ Sun, 03 Jun 2018 14:21:19: 44000000 INFO @ Sun, 03 Jun 2018 14:21:20: 41000000 INFO @ Sun, 03 Jun 2018 14:21:24: 39000000 INFO @ Sun, 03 Jun 2018 14:21:26: 45000000 INFO @ Sun, 03 Jun 2018 14:21:27: 42000000 INFO @ Sun, 03 Jun 2018 14:21:32: 40000000 INFO @ Sun, 03 Jun 2018 14:21:33: 46000000 INFO @ Sun, 03 Jun 2018 14:21:34: 43000000 INFO @ Sun, 03 Jun 2018 14:21:40: 41000000 INFO @ Sun, 03 Jun 2018 14:21:40: 47000000 INFO @ Sun, 03 Jun 2018 14:21:41: 44000000 INFO @ Sun, 03 Jun 2018 14:21:47: 48000000 INFO @ Sun, 03 Jun 2018 14:21:47: 42000000 INFO @ Sun, 03 Jun 2018 14:21:47: 45000000 INFO @ Sun, 03 Jun 2018 14:21:54: 49000000 INFO @ Sun, 03 Jun 2018 14:21:54: 46000000 INFO @ Sun, 03 Jun 2018 14:21:55: 43000000 INFO @ Sun, 03 Jun 2018 14:22:01: 50000000 INFO @ Sun, 03 Jun 2018 14:22:02: 47000000 INFO @ Sun, 03 Jun 2018 14:22:03: 44000000 INFO @ Sun, 03 Jun 2018 14:22:09: 51000000 INFO @ Sun, 03 Jun 2018 14:22:11: 48000000 INFO @ Sun, 03 Jun 2018 14:22:12: 45000000 INFO @ Sun, 03 Jun 2018 14:22:16: 52000000 INFO @ Sun, 03 Jun 2018 14:22:19: 49000000 INFO @ Sun, 03 Jun 2018 14:22:21: 46000000 INFO @ Sun, 03 Jun 2018 14:22:24: 53000000 INFO @ Sun, 03 Jun 2018 14:22:28: 50000000 INFO @ Sun, 03 Jun 2018 14:22:29: 47000000 INFO @ Sun, 03 Jun 2018 14:22:31: 54000000 INFO @ Sun, 03 Jun 2018 14:22:37: 51000000 INFO @ Sun, 03 Jun 2018 14:22:38: 48000000 INFO @ Sun, 03 Jun 2018 14:22:39: 55000000 INFO @ Sun, 03 Jun 2018 14:22:45: 52000000 INFO @ Sun, 03 Jun 2018 14:22:46: 56000000 INFO @ Sun, 03 Jun 2018 14:22:47: 49000000 INFO @ Sun, 03 Jun 2018 14:22:54: 57000000 INFO @ Sun, 03 Jun 2018 14:22:54: 53000000 INFO @ Sun, 03 Jun 2018 14:22:55: 50000000 INFO @ Sun, 03 Jun 2018 14:23:01: 58000000 INFO @ Sun, 03 Jun 2018 14:23:03: 54000000 INFO @ Sun, 03 Jun 2018 14:23:04: 51000000 INFO @ Sun, 03 Jun 2018 14:23:09: 59000000 INFO @ Sun, 03 Jun 2018 14:23:11: 55000000 INFO @ Sun, 03 Jun 2018 14:23:13: 52000000 INFO @ Sun, 03 Jun 2018 14:23:16: 60000000 INFO @ Sun, 03 Jun 2018 14:23:20: 56000000 INFO @ Sun, 03 Jun 2018 14:23:21: 53000000 INFO @ Sun, 03 Jun 2018 14:23:24: 61000000 INFO @ Sun, 03 Jun 2018 14:23:29: 57000000 INFO @ Sun, 03 Jun 2018 14:23:30: 54000000 INFO @ Sun, 03 Jun 2018 14:23:31: 62000000 INFO @ Sun, 03 Jun 2018 14:23:37: 58000000 INFO @ Sun, 03 Jun 2018 14:23:38: 63000000 INFO @ Sun, 03 Jun 2018 14:23:38: 55000000 INFO @ Sun, 03 Jun 2018 14:23:46: 64000000 INFO @ Sun, 03 Jun 2018 14:23:46: 59000000 INFO @ Sun, 03 Jun 2018 14:23:47: 56000000 INFO @ Sun, 03 Jun 2018 14:23:53: 65000000 INFO @ Sun, 03 Jun 2018 14:23:55: 60000000 INFO @ Sun, 03 Jun 2018 14:23:56: 57000000 INFO @ Sun, 03 Jun 2018 14:24:01: 66000000 INFO @ Sun, 03 Jun 2018 14:24:03: 61000000 INFO @ Sun, 03 Jun 2018 14:24:04: 58000000 INFO @ Sun, 03 Jun 2018 14:24:08: 67000000 INFO @ Sun, 03 Jun 2018 14:24:12: 62000000 INFO @ Sun, 03 Jun 2018 14:24:13: 59000000 INFO @ Sun, 03 Jun 2018 14:24:15: 68000000 INFO @ Sun, 03 Jun 2018 14:24:20: 63000000 INFO @ Sun, 03 Jun 2018 14:24:21: 60000000 INFO @ Sun, 03 Jun 2018 14:24:23: 69000000 INFO @ Sun, 03 Jun 2018 14:24:29: 64000000 INFO @ Sun, 03 Jun 2018 14:24:30: 70000000 INFO @ Sun, 03 Jun 2018 14:24:30: 61000000 INFO @ Sun, 03 Jun 2018 14:24:37: 71000000 INFO @ Sun, 03 Jun 2018 14:24:37: 65000000 INFO @ Sun, 03 Jun 2018 14:24:39: 62000000 INFO @ Sun, 03 Jun 2018 14:24:45: 72000000 INFO @ Sun, 03 Jun 2018 14:24:46: 66000000 INFO @ Sun, 03 Jun 2018 14:24:47: 63000000 INFO @ Sun, 03 Jun 2018 14:24:52: 73000000 INFO @ Sun, 03 Jun 2018 14:24:54: 67000000 INFO @ Sun, 03 Jun 2018 14:24:56: 64000000 INFO @ Sun, 03 Jun 2018 14:24:59: 74000000 INFO @ Sun, 03 Jun 2018 14:25:03: 68000000 INFO @ Sun, 03 Jun 2018 14:25:04: 65000000 INFO @ Sun, 03 Jun 2018 14:25:05: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 14:25:05: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 14:25:05: #1 total tags in treatment: 33571147 INFO @ Sun, 03 Jun 2018 14:25:05: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 14:25:05: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 14:25:06: #1 tags after filtering in treatment: 26331188 INFO @ Sun, 03 Jun 2018 14:25:06: #1 Redundant rate of treatment: 0.22 INFO @ Sun, 03 Jun 2018 14:25:06: #1 finished! INFO @ Sun, 03 Jun 2018 14:25:06: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 14:25:06: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 14:25:08: #2 number of paired peaks: 98 WARNING @ Sun, 03 Jun 2018 14:25:08: Too few paired peaks (98) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 14:25:08: Process for pairing-model is terminated! cat: SRX4085350.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085350.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085350.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085350.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 14:25:11: 69000000 INFO @ Sun, 03 Jun 2018 14:25:12: 66000000 INFO @ Sun, 03 Jun 2018 14:25:18: 70000000 INFO @ Sun, 03 Jun 2018 14:25:19: 67000000 INFO @ Sun, 03 Jun 2018 14:25:26: 71000000 INFO @ Sun, 03 Jun 2018 14:25:27: 68000000 INFO @ Sun, 03 Jun 2018 14:25:33: 72000000 INFO @ Sun, 03 Jun 2018 14:25:34: 69000000 INFO @ Sun, 03 Jun 2018 14:25:41: 73000000 INFO @ Sun, 03 Jun 2018 14:25:42: 70000000 INFO @ Sun, 03 Jun 2018 14:25:48: 74000000 INFO @ Sun, 03 Jun 2018 14:25:49: 71000000 INFO @ Sun, 03 Jun 2018 14:25:55: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 14:25:55: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 14:25:55: #1 total tags in treatment: 33571147 INFO @ Sun, 03 Jun 2018 14:25:55: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 14:25:55: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 14:25:55: #1 tags after filtering in treatment: 26331188 INFO @ Sun, 03 Jun 2018 14:25:55: #1 Redundant rate of treatment: 0.22 INFO @ Sun, 03 Jun 2018 14:25:55: #1 finished! INFO @ Sun, 03 Jun 2018 14:25:55: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 14:25:55: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 14:25:56: 72000000 INFO @ Sun, 03 Jun 2018 14:25:57: #2 number of paired peaks: 98 WARNING @ Sun, 03 Jun 2018 14:25:57: Too few paired peaks (98) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 14:25:57: Process for pairing-model is terminated! cat: SRX4085350.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085350.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085350.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085350.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 14:26:03: 73000000 INFO @ Sun, 03 Jun 2018 14:26:08: 74000000 INFO @ Sun, 03 Jun 2018 14:26:14: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 14:26:14: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 14:26:14: #1 total tags in treatment: 33571147 INFO @ Sun, 03 Jun 2018 14:26:14: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 14:26:14: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 14:26:15: #1 tags after filtering in treatment: 26331188 INFO @ Sun, 03 Jun 2018 14:26:15: #1 Redundant rate of treatment: 0.22 INFO @ Sun, 03 Jun 2018 14:26:15: #1 finished! INFO @ Sun, 03 Jun 2018 14:26:15: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 14:26:15: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 14:26:17: #2 number of paired peaks: 98 WARNING @ Sun, 03 Jun 2018 14:26:17: Too few paired peaks (98) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 14:26:17: Process for pairing-model is terminated! cat: SRX4085350.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085350.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085350.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085350.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。