Job ID = 10714429 sra ファイルのダウンロード中... Completed: 6388418K bytes transferred in 91 seconds (573584K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 92223868 spots for /home/okishinya/chipatlas/results/ce10/SRX4085345/SRR7167374.sra Written 92223868 spots for /home/okishinya/chipatlas/results/ce10/SRX4085345/SRR7167374.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:27:58 92223868 reads; of these: 92223868 (100.00%) were paired; of these: 4707884 (5.10%) aligned concordantly 0 times 77771218 (84.33%) aligned concordantly exactly 1 time 9744766 (10.57%) aligned concordantly >1 times ---- 4707884 pairs aligned concordantly 0 times; of these: 1102656 (23.42%) aligned discordantly 1 time ---- 3605228 pairs aligned 0 times concordantly or discordantly; of these: 7210456 mates make up the pairs; of these: 4050541 (56.18%) aligned 0 times 2459194 (34.11%) aligned exactly 1 time 700721 (9.72%) aligned >1 times 97.80% overall alignment rate Time searching: 01:27:58 Overall time: 01:27:58 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 76 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 28964845 / 88120466 = 0.3287 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 03 Jun 2018 14:54:54: # Command line: callpeak -t SRX4085345.bam -f BAM -g ce -n SRX4085345.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX4085345.05 # format = BAM # ChIP-seq file = ['SRX4085345.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:54:54: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:54:54: # Command line: callpeak -t SRX4085345.bam -f BAM -g ce -n SRX4085345.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX4085345.20 # format = BAM # ChIP-seq file = ['SRX4085345.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:54:54: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:54:54: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:54:54: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:54:54: # Command line: callpeak -t SRX4085345.bam -f BAM -g ce -n SRX4085345.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX4085345.10 # format = BAM # ChIP-seq file = ['SRX4085345.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:54:54: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:54:54: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:55:00: 1000000 INFO @ Sun, 03 Jun 2018 14:55:00: 1000000 INFO @ Sun, 03 Jun 2018 14:55:00: 1000000 INFO @ Sun, 03 Jun 2018 14:55:06: 2000000 INFO @ Sun, 03 Jun 2018 14:55:06: 2000000 INFO @ Sun, 03 Jun 2018 14:55:06: 2000000 INFO @ Sun, 03 Jun 2018 14:55:12: 3000000 INFO @ Sun, 03 Jun 2018 14:55:12: 3000000 INFO @ Sun, 03 Jun 2018 14:55:13: 3000000 INFO @ Sun, 03 Jun 2018 14:55:19: 4000000 INFO @ Sun, 03 Jun 2018 14:55:19: 4000000 INFO @ Sun, 03 Jun 2018 14:55:19: 4000000 INFO @ Sun, 03 Jun 2018 14:55:25: 5000000 INFO @ Sun, 03 Jun 2018 14:55:25: 5000000 INFO @ Sun, 03 Jun 2018 14:55:25: 5000000 INFO @ Sun, 03 Jun 2018 14:55:31: 6000000 INFO @ Sun, 03 Jun 2018 14:55:31: 6000000 INFO @ Sun, 03 Jun 2018 14:55:31: 6000000 INFO @ Sun, 03 Jun 2018 14:55:37: 7000000 INFO @ Sun, 03 Jun 2018 14:55:37: 7000000 INFO @ Sun, 03 Jun 2018 14:55:38: 7000000 INFO @ Sun, 03 Jun 2018 14:55:43: 8000000 INFO @ Sun, 03 Jun 2018 14:55:44: 8000000 INFO @ Sun, 03 Jun 2018 14:55:44: 8000000 INFO @ Sun, 03 Jun 2018 14:55:49: 9000000 INFO @ Sun, 03 Jun 2018 14:55:50: 9000000 INFO @ Sun, 03 Jun 2018 14:55:50: 9000000 INFO @ Sun, 03 Jun 2018 14:55:55: 10000000 INFO @ Sun, 03 Jun 2018 14:55:56: 10000000 INFO @ Sun, 03 Jun 2018 14:55:56: 10000000 INFO @ Sun, 03 Jun 2018 14:56:01: 11000000 INFO @ Sun, 03 Jun 2018 14:56:02: 11000000 INFO @ Sun, 03 Jun 2018 14:56:02: 11000000 INFO @ Sun, 03 Jun 2018 14:56:07: 12000000 INFO @ Sun, 03 Jun 2018 14:56:08: 12000000 INFO @ Sun, 03 Jun 2018 14:56:09: 12000000 INFO @ Sun, 03 Jun 2018 14:56:13: 13000000 INFO @ Sun, 03 Jun 2018 14:56:15: 13000000 INFO @ Sun, 03 Jun 2018 14:56:15: 13000000 INFO @ Sun, 03 Jun 2018 14:56:19: 14000000 INFO @ Sun, 03 Jun 2018 14:56:21: 14000000 INFO @ Sun, 03 Jun 2018 14:56:21: 14000000 INFO @ Sun, 03 Jun 2018 14:56:26: 15000000 INFO @ Sun, 03 Jun 2018 14:56:27: 15000000 INFO @ Sun, 03 Jun 2018 14:56:27: 15000000 INFO @ Sun, 03 Jun 2018 14:56:32: 16000000 INFO @ Sun, 03 Jun 2018 14:56:33: 16000000 INFO @ Sun, 03 Jun 2018 14:56:34: 16000000 INFO @ Sun, 03 Jun 2018 14:56:38: 17000000 INFO @ Sun, 03 Jun 2018 14:56:40: 17000000 INFO @ Sun, 03 Jun 2018 14:56:40: 17000000 INFO @ Sun, 03 Jun 2018 14:56:44: 18000000 INFO @ Sun, 03 Jun 2018 14:56:46: 18000000 INFO @ Sun, 03 Jun 2018 14:56:46: 18000000 INFO @ Sun, 03 Jun 2018 14:56:50: 19000000 INFO @ Sun, 03 Jun 2018 14:56:52: 19000000 INFO @ Sun, 03 Jun 2018 14:56:53: 19000000 INFO @ Sun, 03 Jun 2018 14:56:56: 20000000 INFO @ Sun, 03 Jun 2018 14:56:58: 20000000 INFO @ Sun, 03 Jun 2018 14:56:59: 20000000 INFO @ Sun, 03 Jun 2018 14:57:02: 21000000 INFO @ Sun, 03 Jun 2018 14:57:05: 21000000 INFO @ Sun, 03 Jun 2018 14:57:05: 21000000 INFO @ Sun, 03 Jun 2018 14:57:08: 22000000 INFO @ Sun, 03 Jun 2018 14:57:11: 22000000 INFO @ Sun, 03 Jun 2018 14:57:12: 22000000 INFO @ Sun, 03 Jun 2018 14:57:14: 23000000 INFO @ Sun, 03 Jun 2018 14:57:17: 23000000 INFO @ Sun, 03 Jun 2018 14:57:18: 23000000 INFO @ Sun, 03 Jun 2018 14:57:20: 24000000 INFO @ Sun, 03 Jun 2018 14:57:24: 24000000 INFO @ Sun, 03 Jun 2018 14:57:24: 24000000 INFO @ Sun, 03 Jun 2018 14:57:26: 25000000 INFO @ Sun, 03 Jun 2018 14:57:30: 25000000 INFO @ Sun, 03 Jun 2018 14:57:31: 25000000 INFO @ Sun, 03 Jun 2018 14:57:32: 26000000 INFO @ Sun, 03 Jun 2018 14:57:36: 26000000 INFO @ Sun, 03 Jun 2018 14:57:37: 26000000 INFO @ Sun, 03 Jun 2018 14:57:38: 27000000 INFO @ Sun, 03 Jun 2018 14:57:42: 27000000 INFO @ Sun, 03 Jun 2018 14:57:43: 27000000 INFO @ Sun, 03 Jun 2018 14:57:44: 28000000 INFO @ Sun, 03 Jun 2018 14:57:49: 28000000 INFO @ Sun, 03 Jun 2018 14:57:49: 28000000 INFO @ Sun, 03 Jun 2018 14:57:50: 29000000 INFO @ Sun, 03 Jun 2018 14:57:55: 29000000 INFO @ Sun, 03 Jun 2018 14:57:56: 29000000 INFO @ Sun, 03 Jun 2018 14:57:56: 30000000 INFO @ Sun, 03 Jun 2018 14:58:01: 30000000 INFO @ Sun, 03 Jun 2018 14:58:02: 30000000 INFO @ Sun, 03 Jun 2018 14:58:02: 31000000 INFO @ Sun, 03 Jun 2018 14:58:08: 31000000 INFO @ Sun, 03 Jun 2018 14:58:08: 31000000 INFO @ Sun, 03 Jun 2018 14:58:08: 32000000 INFO @ Sun, 03 Jun 2018 14:58:14: 32000000 INFO @ Sun, 03 Jun 2018 14:58:14: 33000000 INFO @ Sun, 03 Jun 2018 14:58:15: 32000000 INFO @ Sun, 03 Jun 2018 14:58:20: 33000000 INFO @ Sun, 03 Jun 2018 14:58:20: 34000000 INFO @ Sun, 03 Jun 2018 14:58:21: 33000000 INFO @ Sun, 03 Jun 2018 14:58:26: 34000000 INFO @ Sun, 03 Jun 2018 14:58:27: 35000000 INFO @ Sun, 03 Jun 2018 14:58:27: 34000000 INFO @ Sun, 03 Jun 2018 14:58:33: 35000000 INFO @ Sun, 03 Jun 2018 14:58:33: 36000000 INFO @ Sun, 03 Jun 2018 14:58:34: 35000000 INFO @ Sun, 03 Jun 2018 14:58:39: 37000000 INFO @ Sun, 03 Jun 2018 14:58:39: 36000000 INFO @ Sun, 03 Jun 2018 14:58:40: 36000000 INFO @ Sun, 03 Jun 2018 14:58:45: 38000000 INFO @ Sun, 03 Jun 2018 14:58:45: 37000000 INFO @ Sun, 03 Jun 2018 14:58:46: 37000000 INFO @ Sun, 03 Jun 2018 14:58:51: 39000000 INFO @ Sun, 03 Jun 2018 14:58:51: 38000000 INFO @ Sun, 03 Jun 2018 14:58:52: 38000000 INFO @ Sun, 03 Jun 2018 14:58:57: 40000000 INFO @ Sun, 03 Jun 2018 14:58:58: 39000000 INFO @ Sun, 03 Jun 2018 14:58:59: 39000000 INFO @ Sun, 03 Jun 2018 14:59:03: 41000000 INFO @ Sun, 03 Jun 2018 14:59:04: 40000000 INFO @ Sun, 03 Jun 2018 14:59:05: 40000000 INFO @ Sun, 03 Jun 2018 14:59:09: 42000000 INFO @ Sun, 03 Jun 2018 14:59:10: 41000000 INFO @ Sun, 03 Jun 2018 14:59:11: 41000000 INFO @ Sun, 03 Jun 2018 14:59:15: 43000000 INFO @ Sun, 03 Jun 2018 14:59:17: 42000000 INFO @ Sun, 03 Jun 2018 14:59:18: 42000000 INFO @ Sun, 03 Jun 2018 14:59:21: 44000000 INFO @ Sun, 03 Jun 2018 14:59:23: 43000000 INFO @ Sun, 03 Jun 2018 14:59:24: 43000000 INFO @ Sun, 03 Jun 2018 14:59:27: 45000000 INFO @ Sun, 03 Jun 2018 14:59:29: 44000000 INFO @ Sun, 03 Jun 2018 14:59:30: 44000000 INFO @ Sun, 03 Jun 2018 14:59:33: 46000000 INFO @ Sun, 03 Jun 2018 14:59:35: 45000000 INFO @ Sun, 03 Jun 2018 14:59:37: 45000000 INFO @ Sun, 03 Jun 2018 14:59:39: 47000000 INFO @ Sun, 03 Jun 2018 14:59:42: 46000000 INFO @ Sun, 03 Jun 2018 14:59:43: 46000000 INFO @ Sun, 03 Jun 2018 14:59:45: 48000000 INFO @ Sun, 03 Jun 2018 14:59:48: 47000000 INFO @ Sun, 03 Jun 2018 14:59:49: 47000000 INFO @ Sun, 03 Jun 2018 14:59:51: 49000000 INFO @ Sun, 03 Jun 2018 14:59:54: 48000000 INFO @ Sun, 03 Jun 2018 14:59:55: 48000000 INFO @ Sun, 03 Jun 2018 14:59:57: 50000000 INFO @ Sun, 03 Jun 2018 15:00:01: 49000000 INFO @ Sun, 03 Jun 2018 15:00:02: 49000000 INFO @ Sun, 03 Jun 2018 15:00:03: 51000000 INFO @ Sun, 03 Jun 2018 15:00:07: 50000000 INFO @ Sun, 03 Jun 2018 15:00:08: 50000000 INFO @ Sun, 03 Jun 2018 15:00:10: 52000000 INFO @ Sun, 03 Jun 2018 15:00:13: 51000000 INFO @ Sun, 03 Jun 2018 15:00:14: 51000000 INFO @ Sun, 03 Jun 2018 15:00:16: 53000000 INFO @ Sun, 03 Jun 2018 15:00:20: 52000000 INFO @ Sun, 03 Jun 2018 15:00:21: 52000000 INFO @ Sun, 03 Jun 2018 15:00:22: 54000000 INFO @ Sun, 03 Jun 2018 15:00:26: 53000000 INFO @ Sun, 03 Jun 2018 15:00:27: 53000000 INFO @ Sun, 03 Jun 2018 15:00:28: 55000000 INFO @ Sun, 03 Jun 2018 15:00:32: 54000000 INFO @ Sun, 03 Jun 2018 15:00:33: 54000000 INFO @ Sun, 03 Jun 2018 15:00:34: 56000000 INFO @ Sun, 03 Jun 2018 15:00:38: 55000000 INFO @ Sun, 03 Jun 2018 15:00:40: 55000000 INFO @ Sun, 03 Jun 2018 15:00:40: 57000000 INFO @ Sun, 03 Jun 2018 15:00:45: 56000000 INFO @ Sun, 03 Jun 2018 15:00:46: 56000000 INFO @ Sun, 03 Jun 2018 15:00:46: 58000000 INFO @ Sun, 03 Jun 2018 15:00:51: 57000000 INFO @ Sun, 03 Jun 2018 15:00:52: 59000000 INFO @ Sun, 03 Jun 2018 15:00:52: 57000000 INFO @ Sun, 03 Jun 2018 15:00:57: 58000000 INFO @ Sun, 03 Jun 2018 15:00:58: 60000000 INFO @ Sun, 03 Jun 2018 15:00:59: 58000000 INFO @ Sun, 03 Jun 2018 15:01:04: 59000000 INFO @ Sun, 03 Jun 2018 15:01:04: 61000000 INFO @ Sun, 03 Jun 2018 15:01:05: 59000000 INFO @ Sun, 03 Jun 2018 15:01:10: 60000000 INFO @ Sun, 03 Jun 2018 15:01:10: 62000000 INFO @ Sun, 03 Jun 2018 15:01:11: 60000000 INFO @ Sun, 03 Jun 2018 15:01:16: 61000000 INFO @ Sun, 03 Jun 2018 15:01:16: 63000000 INFO @ Sun, 03 Jun 2018 15:01:18: 61000000 INFO @ Sun, 03 Jun 2018 15:01:23: 62000000 INFO @ Sun, 03 Jun 2018 15:01:23: 64000000 INFO @ Sun, 03 Jun 2018 15:01:24: 62000000 INFO @ Sun, 03 Jun 2018 15:01:29: 63000000 INFO @ Sun, 03 Jun 2018 15:01:29: 65000000 INFO @ Sun, 03 Jun 2018 15:01:30: 63000000 INFO @ Sun, 03 Jun 2018 15:01:35: 64000000 INFO @ Sun, 03 Jun 2018 15:01:35: 66000000 INFO @ Sun, 03 Jun 2018 15:01:37: 64000000 INFO @ Sun, 03 Jun 2018 15:01:41: 65000000 INFO @ Sun, 03 Jun 2018 15:01:42: 67000000 INFO @ Sun, 03 Jun 2018 15:01:43: 65000000 INFO @ Sun, 03 Jun 2018 15:01:47: 66000000 INFO @ Sun, 03 Jun 2018 15:01:48: 68000000 INFO @ Sun, 03 Jun 2018 15:01:49: 66000000 INFO @ Sun, 03 Jun 2018 15:01:53: 67000000 INFO @ Sun, 03 Jun 2018 15:01:54: 69000000 INFO @ Sun, 03 Jun 2018 15:01:55: 67000000 INFO @ Sun, 03 Jun 2018 15:01:59: 68000000 INFO @ Sun, 03 Jun 2018 15:02:00: 70000000 INFO @ Sun, 03 Jun 2018 15:02:02: 68000000 INFO @ Sun, 03 Jun 2018 15:02:05: 69000000 INFO @ Sun, 03 Jun 2018 15:02:06: 71000000 INFO @ Sun, 03 Jun 2018 15:02:08: 69000000 INFO @ Sun, 03 Jun 2018 15:02:11: 70000000 INFO @ Sun, 03 Jun 2018 15:02:12: 72000000 INFO @ Sun, 03 Jun 2018 15:02:14: 70000000 INFO @ Sun, 03 Jun 2018 15:02:18: 71000000 INFO @ Sun, 03 Jun 2018 15:02:18: 73000000 INFO @ Sun, 03 Jun 2018 15:02:21: 71000000 INFO @ Sun, 03 Jun 2018 15:02:24: 72000000 INFO @ Sun, 03 Jun 2018 15:02:24: 74000000 INFO @ Sun, 03 Jun 2018 15:02:27: 72000000 INFO @ Sun, 03 Jun 2018 15:02:30: 73000000 INFO @ Sun, 03 Jun 2018 15:02:30: 75000000 INFO @ Sun, 03 Jun 2018 15:02:33: 73000000 INFO @ Sun, 03 Jun 2018 15:02:36: 76000000 INFO @ Sun, 03 Jun 2018 15:02:36: 74000000 INFO @ Sun, 03 Jun 2018 15:02:39: 74000000 INFO @ Sun, 03 Jun 2018 15:02:42: 77000000 INFO @ Sun, 03 Jun 2018 15:02:43: 75000000 INFO @ Sun, 03 Jun 2018 15:02:46: 75000000 INFO @ Sun, 03 Jun 2018 15:02:49: 78000000 INFO @ Sun, 03 Jun 2018 15:02:49: 76000000 INFO @ Sun, 03 Jun 2018 15:02:52: 76000000 INFO @ Sun, 03 Jun 2018 15:02:55: 79000000 INFO @ Sun, 03 Jun 2018 15:02:55: 77000000 INFO @ Sun, 03 Jun 2018 15:02:58: 77000000 INFO @ Sun, 03 Jun 2018 15:03:01: 80000000 INFO @ Sun, 03 Jun 2018 15:03:01: 78000000 INFO @ Sun, 03 Jun 2018 15:03:05: 78000000 INFO @ Sun, 03 Jun 2018 15:03:07: 81000000 INFO @ Sun, 03 Jun 2018 15:03:08: 79000000 INFO @ Sun, 03 Jun 2018 15:03:11: 79000000 INFO @ Sun, 03 Jun 2018 15:03:13: 82000000 INFO @ Sun, 03 Jun 2018 15:03:14: 80000000 INFO @ Sun, 03 Jun 2018 15:03:17: 80000000 INFO @ Sun, 03 Jun 2018 15:03:19: 83000000 INFO @ Sun, 03 Jun 2018 15:03:20: 81000000 INFO @ Sun, 03 Jun 2018 15:03:23: 81000000 INFO @ Sun, 03 Jun 2018 15:03:25: 84000000 INFO @ Sun, 03 Jun 2018 15:03:26: 82000000 INFO @ Sun, 03 Jun 2018 15:03:30: 82000000 INFO @ Sun, 03 Jun 2018 15:03:31: 85000000 INFO @ Sun, 03 Jun 2018 15:03:33: 83000000 INFO @ Sun, 03 Jun 2018 15:03:36: 83000000 INFO @ Sun, 03 Jun 2018 15:03:37: 86000000 INFO @ Sun, 03 Jun 2018 15:03:39: 84000000 INFO @ Sun, 03 Jun 2018 15:03:42: 84000000 INFO @ Sun, 03 Jun 2018 15:03:44: 87000000 INFO @ Sun, 03 Jun 2018 15:03:45: 85000000 INFO @ Sun, 03 Jun 2018 15:03:49: 85000000 INFO @ Sun, 03 Jun 2018 15:03:50: 88000000 INFO @ Sun, 03 Jun 2018 15:03:50: 86000000 INFO @ Sun, 03 Jun 2018 15:03:55: 86000000 INFO @ Sun, 03 Jun 2018 15:03:56: 89000000 INFO @ Sun, 03 Jun 2018 15:03:56: 87000000 INFO @ Sun, 03 Jun 2018 15:04:01: 87000000 INFO @ Sun, 03 Jun 2018 15:04:02: 90000000 INFO @ Sun, 03 Jun 2018 15:04:02: 88000000 INFO @ Sun, 03 Jun 2018 15:04:07: 88000000 INFO @ Sun, 03 Jun 2018 15:04:08: 91000000 INFO @ Sun, 03 Jun 2018 15:04:08: 89000000 INFO @ Sun, 03 Jun 2018 15:04:14: 89000000 INFO @ Sun, 03 Jun 2018 15:04:14: 90000000 INFO @ Sun, 03 Jun 2018 15:04:15: 92000000 INFO @ Sun, 03 Jun 2018 15:04:20: 90000000 INFO @ Sun, 03 Jun 2018 15:04:20: 91000000 INFO @ Sun, 03 Jun 2018 15:04:21: 93000000 INFO @ Sun, 03 Jun 2018 15:04:26: 91000000 INFO @ Sun, 03 Jun 2018 15:04:26: 92000000 INFO @ Sun, 03 Jun 2018 15:04:27: 94000000 INFO @ Sun, 03 Jun 2018 15:04:32: 93000000 INFO @ Sun, 03 Jun 2018 15:04:32: 92000000 INFO @ Sun, 03 Jun 2018 15:04:33: 95000000 INFO @ Sun, 03 Jun 2018 15:04:38: 94000000 INFO @ Sun, 03 Jun 2018 15:04:39: 93000000 INFO @ Sun, 03 Jun 2018 15:04:39: 96000000 INFO @ Sun, 03 Jun 2018 15:04:45: 95000000 INFO @ Sun, 03 Jun 2018 15:04:45: 94000000 INFO @ Sun, 03 Jun 2018 15:04:46: 97000000 INFO @ Sun, 03 Jun 2018 15:04:51: 95000000 INFO @ Sun, 03 Jun 2018 15:04:51: 96000000 INFO @ Sun, 03 Jun 2018 15:04:52: 98000000 INFO @ Sun, 03 Jun 2018 15:04:57: 96000000 INFO @ Sun, 03 Jun 2018 15:04:58: 97000000 INFO @ Sun, 03 Jun 2018 15:04:59: 99000000 INFO @ Sun, 03 Jun 2018 15:05:03: 97000000 INFO @ Sun, 03 Jun 2018 15:05:04: 98000000 INFO @ Sun, 03 Jun 2018 15:05:05: 100000000 INFO @ Sun, 03 Jun 2018 15:05:09: 98000000 INFO @ Sun, 03 Jun 2018 15:05:10: 99000000 INFO @ Sun, 03 Jun 2018 15:05:12: 101000000 INFO @ Sun, 03 Jun 2018 15:05:15: 99000000 INFO @ Sun, 03 Jun 2018 15:05:17: 100000000 INFO @ Sun, 03 Jun 2018 15:05:18: 102000000 INFO @ Sun, 03 Jun 2018 15:05:21: 100000000 INFO @ Sun, 03 Jun 2018 15:05:23: 101000000 INFO @ Sun, 03 Jun 2018 15:05:25: 103000000 INFO @ Sun, 03 Jun 2018 15:05:28: 101000000 INFO @ Sun, 03 Jun 2018 15:05:30: 102000000 INFO @ Sun, 03 Jun 2018 15:05:31: 104000000 INFO @ Sun, 03 Jun 2018 15:05:34: 102000000 INFO @ Sun, 03 Jun 2018 15:05:36: 103000000 INFO @ Sun, 03 Jun 2018 15:05:38: 105000000 INFO @ Sun, 03 Jun 2018 15:05:40: 103000000 INFO @ Sun, 03 Jun 2018 15:05:43: 104000000 INFO @ Sun, 03 Jun 2018 15:05:44: 106000000 INFO @ Sun, 03 Jun 2018 15:05:46: 104000000 INFO @ Sun, 03 Jun 2018 15:05:49: 105000000 INFO @ Sun, 03 Jun 2018 15:05:51: 107000000 INFO @ Sun, 03 Jun 2018 15:05:52: 105000000 INFO @ Sun, 03 Jun 2018 15:05:55: 106000000 INFO @ Sun, 03 Jun 2018 15:05:57: 108000000 INFO @ Sun, 03 Jun 2018 15:05:58: 106000000 INFO @ Sun, 03 Jun 2018 15:06:02: 107000000 INFO @ Sun, 03 Jun 2018 15:06:03: 109000000 INFO @ Sun, 03 Jun 2018 15:06:05: 107000000 INFO @ Sun, 03 Jun 2018 15:06:08: 108000000 INFO @ Sun, 03 Jun 2018 15:06:09: 110000000 INFO @ Sun, 03 Jun 2018 15:06:11: 108000000 INFO @ Sun, 03 Jun 2018 15:06:14: 109000000 INFO @ Sun, 03 Jun 2018 15:06:15: 111000000 INFO @ Sun, 03 Jun 2018 15:06:17: 109000000 INFO @ Sun, 03 Jun 2018 15:06:20: 110000000 INFO @ Sun, 03 Jun 2018 15:06:21: 112000000 INFO @ Sun, 03 Jun 2018 15:06:23: 110000000 INFO @ Sun, 03 Jun 2018 15:06:26: 111000000 INFO @ Sun, 03 Jun 2018 15:06:27: 113000000 INFO @ Sun, 03 Jun 2018 15:06:30: 111000000 INFO @ Sun, 03 Jun 2018 15:06:33: 112000000 INFO @ Sun, 03 Jun 2018 15:06:33: 114000000 INFO @ Sun, 03 Jun 2018 15:06:36: 112000000 INFO @ Sun, 03 Jun 2018 15:06:39: 113000000 INFO @ Sun, 03 Jun 2018 15:06:39: 115000000 INFO @ Sun, 03 Jun 2018 15:06:42: 113000000 INFO @ Sun, 03 Jun 2018 15:06:45: 114000000 INFO @ Sun, 03 Jun 2018 15:06:45: 116000000 INFO @ Sun, 03 Jun 2018 15:06:48: 114000000 INFO @ Sun, 03 Jun 2018 15:06:51: 115000000 INFO @ Sun, 03 Jun 2018 15:06:51: 117000000 INFO @ Sun, 03 Jun 2018 15:06:55: 115000000 INFO @ Sun, 03 Jun 2018 15:06:57: 118000000 INFO @ Sun, 03 Jun 2018 15:06:58: 116000000 INFO @ Sun, 03 Jun 2018 15:07:01: 116000000 INFO @ Sun, 03 Jun 2018 15:07:03: 119000000 INFO @ Sun, 03 Jun 2018 15:07:04: 117000000 INFO @ Sun, 03 Jun 2018 15:07:08: 117000000 INFO @ Sun, 03 Jun 2018 15:07:10: 120000000 INFO @ Sun, 03 Jun 2018 15:07:11: 118000000 INFO @ Sun, 03 Jun 2018 15:07:14: 118000000 INFO @ Sun, 03 Jun 2018 15:07:16: 121000000 INFO @ Sun, 03 Jun 2018 15:07:17: 119000000 INFO @ Sun, 03 Jun 2018 15:07:21: 119000000 INFO @ Sun, 03 Jun 2018 15:07:22: 122000000 INFO @ Sun, 03 Jun 2018 15:07:24: 120000000 INFO @ Sun, 03 Jun 2018 15:07:25: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 15:07:25: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 15:07:25: #1 total tags in treatment: 58679527 INFO @ Sun, 03 Jun 2018 15:07:25: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 15:07:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 15:07:27: #1 tags after filtering in treatment: 42063749 INFO @ Sun, 03 Jun 2018 15:07:27: #1 Redundant rate of treatment: 0.28 INFO @ Sun, 03 Jun 2018 15:07:27: #1 finished! INFO @ Sun, 03 Jun 2018 15:07:27: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 15:07:27: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 15:07:28: 120000000 INFO @ Sun, 03 Jun 2018 15:07:29: #2 number of paired peaks: 0 WARNING @ Sun, 03 Jun 2018 15:07:29: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 15:07:29: Process for pairing-model is terminated! cat: SRX4085345.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 10 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085345.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085345.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085345.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 15:07:30: 121000000 INFO @ Sun, 03 Jun 2018 15:07:34: 121000000 INFO @ Sun, 03 Jun 2018 15:07:37: 122000000 INFO @ Sun, 03 Jun 2018 15:07:40: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 15:07:40: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 15:07:40: #1 total tags in treatment: 58679527 INFO @ Sun, 03 Jun 2018 15:07:40: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 15:07:40: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 15:07:40: 122000000 INFO @ Sun, 03 Jun 2018 15:07:42: #1 tags after filtering in treatment: 42063749 INFO @ Sun, 03 Jun 2018 15:07:42: #1 Redundant rate of treatment: 0.28 INFO @ Sun, 03 Jun 2018 15:07:42: #1 finished! INFO @ Sun, 03 Jun 2018 15:07:42: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 15:07:42: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 15:07:44: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 15:07:44: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 15:07:44: #1 total tags in treatment: 58679527 INFO @ Sun, 03 Jun 2018 15:07:44: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 15:07:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 15:07:44: #2 number of paired peaks: 0 WARNING @ Sun, 03 Jun 2018 15:07:44: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 15:07:44: Process for pairing-model is terminated! cat: SRX4085345.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085345.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085345.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085345.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 15:07:45: #1 tags after filtering in treatment: 42063749 INFO @ Sun, 03 Jun 2018 15:07:45: #1 Redundant rate of treatment: 0.28 INFO @ Sun, 03 Jun 2018 15:07:45: #1 finished! INFO @ Sun, 03 Jun 2018 15:07:45: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 15:07:45: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 15:07:48: #2 number of paired peaks: 0 WARNING @ Sun, 03 Jun 2018 15:07:48: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 15:07:48: Process for pairing-model is terminated! cat: SRX4085345.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085345.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085345.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085345.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。