Job ID = 12264761 SRX = SRX3029126 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 43459436 spots for SRR5860426/SRR5860426.sra Written 43459436 spots for SRR5860426/SRR5860426.sra fastq に変換しました。 bowtie でマッピング中... Your job 12265471 ("srTce11") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:45:51 43459436 reads; of these: 43459436 (100.00%) were paired; of these: 18785250 (43.22%) aligned concordantly 0 times 21534800 (49.55%) aligned concordantly exactly 1 time 3139386 (7.22%) aligned concordantly >1 times ---- 18785250 pairs aligned concordantly 0 times; of these: 4920922 (26.20%) aligned discordantly 1 time ---- 13864328 pairs aligned 0 times concordantly or discordantly; of these: 27728656 mates make up the pairs; of these: 25385732 (91.55%) aligned 0 times 1116617 (4.03%) aligned exactly 1 time 1226307 (4.42%) aligned >1 times 70.79% overall alignment rate Time searching: 00:45:51 Overall time: 00:45:51 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 7048199 / 29247134 = 0.2410 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:18:00: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:18:00: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:18:00: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:18:08: 1000000 INFO @ Sat, 03 Apr 2021 07:18:16: 2000000 INFO @ Sat, 03 Apr 2021 07:18:24: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:18:30: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:18:30: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:18:30: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:18:32: 4000000 INFO @ Sat, 03 Apr 2021 07:18:39: 1000000 INFO @ Sat, 03 Apr 2021 07:18:40: 5000000 INFO @ Sat, 03 Apr 2021 07:18:49: 6000000 INFO @ Sat, 03 Apr 2021 07:18:50: 2000000 BedGraph に変換中... INFO @ Sat, 03 Apr 2021 07:18:58: 7000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:19:00: 3000000 INFO @ Sat, 03 Apr 2021 07:19:02: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:19:02: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:19:02: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:19:08: 8000000 INFO @ Sat, 03 Apr 2021 07:19:10: 4000000 INFO @ Sat, 03 Apr 2021 07:19:12: 1000000 INFO @ Sat, 03 Apr 2021 07:19:17: 9000000 INFO @ Sat, 03 Apr 2021 07:19:21: 2000000 INFO @ Sat, 03 Apr 2021 07:19:23: 5000000 INFO @ Sat, 03 Apr 2021 07:19:26: 10000000 INFO @ Sat, 03 Apr 2021 07:19:29: 3000000 INFO @ Sat, 03 Apr 2021 07:19:33: 6000000 INFO @ Sat, 03 Apr 2021 07:19:36: 11000000 INFO @ Sat, 03 Apr 2021 07:19:37: 4000000 INFO @ Sat, 03 Apr 2021 07:19:41: 7000000 INFO @ Sat, 03 Apr 2021 07:19:45: 12000000 INFO @ Sat, 03 Apr 2021 07:19:46: 5000000 INFO @ Sat, 03 Apr 2021 07:19:51: 8000000 INFO @ Sat, 03 Apr 2021 07:19:54: 13000000 INFO @ Sat, 03 Apr 2021 07:19:55: 6000000 INFO @ Sat, 03 Apr 2021 07:20:00: 9000000 INFO @ Sat, 03 Apr 2021 07:20:03: 14000000 INFO @ Sat, 03 Apr 2021 07:20:04: 7000000 INFO @ Sat, 03 Apr 2021 07:20:09: 10000000 INFO @ Sat, 03 Apr 2021 07:20:12: 8000000 INFO @ Sat, 03 Apr 2021 07:20:15: 15000000 INFO @ Sat, 03 Apr 2021 07:20:17: 11000000 INFO @ Sat, 03 Apr 2021 07:20:19: 9000000 INFO @ Sat, 03 Apr 2021 07:20:24: 16000000 INFO @ Sat, 03 Apr 2021 07:20:26: 12000000 INFO @ Sat, 03 Apr 2021 07:20:27: 10000000 INFO @ Sat, 03 Apr 2021 07:20:32: 17000000 INFO @ Sat, 03 Apr 2021 07:20:35: 13000000 INFO @ Sat, 03 Apr 2021 07:20:36: 11000000 INFO @ Sat, 03 Apr 2021 07:20:41: 18000000 INFO @ Sat, 03 Apr 2021 07:20:43: 14000000 INFO @ Sat, 03 Apr 2021 07:20:44: 12000000 INFO @ Sat, 03 Apr 2021 07:20:49: 19000000 INFO @ Sat, 03 Apr 2021 07:20:51: 15000000 INFO @ Sat, 03 Apr 2021 07:20:54: 13000000 INFO @ Sat, 03 Apr 2021 07:20:57: 20000000 INFO @ Sat, 03 Apr 2021 07:21:01: 16000000 INFO @ Sat, 03 Apr 2021 07:21:03: 14000000 INFO @ Sat, 03 Apr 2021 07:21:04: 21000000 INFO @ Sat, 03 Apr 2021 07:21:08: 17000000 INFO @ Sat, 03 Apr 2021 07:21:11: 22000000 INFO @ Sat, 03 Apr 2021 07:21:11: 15000000 INFO @ Sat, 03 Apr 2021 07:21:16: 18000000 INFO @ Sat, 03 Apr 2021 07:21:18: 23000000 INFO @ Sat, 03 Apr 2021 07:21:19: 16000000 INFO @ Sat, 03 Apr 2021 07:21:24: 19000000 INFO @ Sat, 03 Apr 2021 07:21:26: 24000000 INFO @ Sat, 03 Apr 2021 07:21:27: 17000000 INFO @ Sat, 03 Apr 2021 07:21:33: 20000000 INFO @ Sat, 03 Apr 2021 07:21:33: 25000000 INFO @ Sat, 03 Apr 2021 07:21:35: 18000000 INFO @ Sat, 03 Apr 2021 07:21:40: 26000000 INFO @ Sat, 03 Apr 2021 07:21:41: 21000000 INFO @ Sat, 03 Apr 2021 07:21:43: 19000000 INFO @ Sat, 03 Apr 2021 07:21:48: 27000000 INFO @ Sat, 03 Apr 2021 07:21:50: 22000000 INFO @ Sat, 03 Apr 2021 07:21:51: 20000000 INFO @ Sat, 03 Apr 2021 07:21:56: 28000000 INFO @ Sat, 03 Apr 2021 07:21:57: 23000000 INFO @ Sat, 03 Apr 2021 07:21:59: 21000000 INFO @ Sat, 03 Apr 2021 07:22:04: 29000000 INFO @ Sat, 03 Apr 2021 07:22:05: 24000000 INFO @ Sat, 03 Apr 2021 07:22:07: 22000000 INFO @ Sat, 03 Apr 2021 07:22:11: 30000000 INFO @ Sat, 03 Apr 2021 07:22:12: 25000000 INFO @ Sat, 03 Apr 2021 07:22:15: 23000000 INFO @ Sat, 03 Apr 2021 07:22:19: 31000000 INFO @ Sat, 03 Apr 2021 07:22:21: 26000000 INFO @ Sat, 03 Apr 2021 07:22:24: 24000000 INFO @ Sat, 03 Apr 2021 07:22:27: 32000000 INFO @ Sat, 03 Apr 2021 07:22:29: 27000000 INFO @ Sat, 03 Apr 2021 07:22:32: 25000000 INFO @ Sat, 03 Apr 2021 07:22:34: 33000000 INFO @ Sat, 03 Apr 2021 07:22:38: 28000000 INFO @ Sat, 03 Apr 2021 07:22:40: 26000000 INFO @ Sat, 03 Apr 2021 07:22:41: 34000000 INFO @ Sat, 03 Apr 2021 07:22:46: 29000000 INFO @ Sat, 03 Apr 2021 07:22:48: 35000000 INFO @ Sat, 03 Apr 2021 07:22:49: 27000000 INFO @ Sat, 03 Apr 2021 07:22:53: 30000000 INFO @ Sat, 03 Apr 2021 07:22:54: 36000000 INFO @ Sat, 03 Apr 2021 07:22:57: 28000000 INFO @ Sat, 03 Apr 2021 07:23:01: 31000000 INFO @ Sat, 03 Apr 2021 07:23:01: 37000000 INFO @ Sat, 03 Apr 2021 07:23:05: 29000000 INFO @ Sat, 03 Apr 2021 07:23:08: 38000000 INFO @ Sat, 03 Apr 2021 07:23:09: 32000000 INFO @ Sat, 03 Apr 2021 07:23:13: 30000000 INFO @ Sat, 03 Apr 2021 07:23:14: 39000000 INFO @ Sat, 03 Apr 2021 07:23:16: 33000000 INFO @ Sat, 03 Apr 2021 07:23:20: 31000000 INFO @ Sat, 03 Apr 2021 07:23:21: 40000000 INFO @ Sat, 03 Apr 2021 07:23:24: 34000000 INFO @ Sat, 03 Apr 2021 07:23:27: 41000000 INFO @ Sat, 03 Apr 2021 07:23:28: 32000000 INFO @ Sat, 03 Apr 2021 07:23:32: 35000000 INFO @ Sat, 03 Apr 2021 07:23:33: 42000000 INFO @ Sat, 03 Apr 2021 07:23:35: 33000000 INFO @ Sat, 03 Apr 2021 07:23:40: 43000000 INFO @ Sat, 03 Apr 2021 07:23:40: 36000000 INFO @ Sat, 03 Apr 2021 07:23:43: 34000000 INFO @ Sat, 03 Apr 2021 07:23:46: 44000000 INFO @ Sat, 03 Apr 2021 07:23:48: 37000000 INFO @ Sat, 03 Apr 2021 07:23:50: 35000000 INFO @ Sat, 03 Apr 2021 07:23:53: 45000000 INFO @ Sat, 03 Apr 2021 07:23:56: 38000000 INFO @ Sat, 03 Apr 2021 07:23:58: 36000000 INFO @ Sat, 03 Apr 2021 07:24:00: 46000000 INFO @ Sat, 03 Apr 2021 07:24:05: 39000000 INFO @ Sat, 03 Apr 2021 07:24:07: 37000000 INFO @ Sat, 03 Apr 2021 07:24:07: 47000000 INFO @ Sat, 03 Apr 2021 07:24:11: #1 tag size is determined as 76 bps INFO @ Sat, 03 Apr 2021 07:24:11: #1 tag size = 76 INFO @ Sat, 03 Apr 2021 07:24:11: #1 total tags in treatment: 18913972 INFO @ Sat, 03 Apr 2021 07:24:11: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:24:11: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:24:11: #1 tags after filtering in treatment: 13380813 INFO @ Sat, 03 Apr 2021 07:24:11: #1 Redundant rate of treatment: 0.29 INFO @ Sat, 03 Apr 2021 07:24:11: #1 finished! INFO @ Sat, 03 Apr 2021 07:24:11: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:24:11: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:24:12: #2 number of paired peaks: 280 WARNING @ Sat, 03 Apr 2021 07:24:12: Fewer paired peaks (280) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 280 pairs to build model! INFO @ Sat, 03 Apr 2021 07:24:12: start model_add_line... INFO @ Sat, 03 Apr 2021 07:24:12: start X-correlation... INFO @ Sat, 03 Apr 2021 07:24:12: end of X-cor INFO @ Sat, 03 Apr 2021 07:24:12: #2 finished! INFO @ Sat, 03 Apr 2021 07:24:12: #2 predicted fragment length is 103 bps INFO @ Sat, 03 Apr 2021 07:24:12: #2 alternative fragment length(s) may be 103,598 bps INFO @ Sat, 03 Apr 2021 07:24:12: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.05_model.r WARNING @ Sat, 03 Apr 2021 07:24:12: #2 Since the d (103) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:24:12: #2 You may need to consider one of the other alternative d(s): 103,598 WARNING @ Sat, 03 Apr 2021 07:24:12: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:24:12: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:24:12: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:24:13: 40000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 07:24:16: 38000000 INFO @ Sat, 03 Apr 2021 07:24:21: 41000000 INFO @ Sat, 03 Apr 2021 07:24:24: 39000000 INFO @ Sat, 03 Apr 2021 07:24:29: 42000000 INFO @ Sat, 03 Apr 2021 07:24:32: 40000000 INFO @ Sat, 03 Apr 2021 07:24:38: 43000000 INFO @ Sat, 03 Apr 2021 07:24:39: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:24:40: 41000000 INFO @ Sat, 03 Apr 2021 07:24:46: 44000000 INFO @ Sat, 03 Apr 2021 07:24:49: 42000000 INFO @ Sat, 03 Apr 2021 07:24:53: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.05_peaks.xls INFO @ Sat, 03 Apr 2021 07:24:53: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:24:53: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.05_summits.bed INFO @ Sat, 03 Apr 2021 07:24:54: Done! pass1 - making usageList (7 chroms): 3 millis pass2 - checking and writing primary data (9265 records, 4 fields): 15 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:24:54: 45000000 INFO @ Sat, 03 Apr 2021 07:24:57: 43000000 INFO @ Sat, 03 Apr 2021 07:25:02: 46000000 INFO @ Sat, 03 Apr 2021 07:25:05: 44000000 INFO @ Sat, 03 Apr 2021 07:25:10: 47000000 INFO @ Sat, 03 Apr 2021 07:25:13: 45000000 INFO @ Sat, 03 Apr 2021 07:25:14: #1 tag size is determined as 76 bps INFO @ Sat, 03 Apr 2021 07:25:14: #1 tag size = 76 INFO @ Sat, 03 Apr 2021 07:25:14: #1 total tags in treatment: 18913972 INFO @ Sat, 03 Apr 2021 07:25:14: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:25:14: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:25:14: #1 tags after filtering in treatment: 13380813 INFO @ Sat, 03 Apr 2021 07:25:14: #1 Redundant rate of treatment: 0.29 INFO @ Sat, 03 Apr 2021 07:25:14: #1 finished! INFO @ Sat, 03 Apr 2021 07:25:14: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:25:14: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:25:15: #2 number of paired peaks: 280 WARNING @ Sat, 03 Apr 2021 07:25:15: Fewer paired peaks (280) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 280 pairs to build model! INFO @ Sat, 03 Apr 2021 07:25:15: start model_add_line... INFO @ Sat, 03 Apr 2021 07:25:15: start X-correlation... INFO @ Sat, 03 Apr 2021 07:25:15: end of X-cor INFO @ Sat, 03 Apr 2021 07:25:15: #2 finished! INFO @ Sat, 03 Apr 2021 07:25:15: #2 predicted fragment length is 103 bps INFO @ Sat, 03 Apr 2021 07:25:15: #2 alternative fragment length(s) may be 103,598 bps INFO @ Sat, 03 Apr 2021 07:25:15: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.10_model.r WARNING @ Sat, 03 Apr 2021 07:25:15: #2 Since the d (103) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:25:15: #2 You may need to consider one of the other alternative d(s): 103,598 WARNING @ Sat, 03 Apr 2021 07:25:15: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:25:15: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:25:15: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:25:21: 46000000 INFO @ Sat, 03 Apr 2021 07:25:28: 47000000 BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 07:25:32: #1 tag size is determined as 76 bps INFO @ Sat, 03 Apr 2021 07:25:32: #1 tag size = 76 INFO @ Sat, 03 Apr 2021 07:25:32: #1 total tags in treatment: 18913972 INFO @ Sat, 03 Apr 2021 07:25:32: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:25:32: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:25:32: #1 tags after filtering in treatment: 13380813 INFO @ Sat, 03 Apr 2021 07:25:32: #1 Redundant rate of treatment: 0.29 INFO @ Sat, 03 Apr 2021 07:25:32: #1 finished! INFO @ Sat, 03 Apr 2021 07:25:32: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:25:32: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:25:33: #2 number of paired peaks: 280 WARNING @ Sat, 03 Apr 2021 07:25:33: Fewer paired peaks (280) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 280 pairs to build model! INFO @ Sat, 03 Apr 2021 07:25:33: start model_add_line... INFO @ Sat, 03 Apr 2021 07:25:33: start X-correlation... INFO @ Sat, 03 Apr 2021 07:25:33: end of X-cor INFO @ Sat, 03 Apr 2021 07:25:33: #2 finished! INFO @ Sat, 03 Apr 2021 07:25:33: #2 predicted fragment length is 103 bps INFO @ Sat, 03 Apr 2021 07:25:33: #2 alternative fragment length(s) may be 103,598 bps INFO @ Sat, 03 Apr 2021 07:25:33: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.20_model.r WARNING @ Sat, 03 Apr 2021 07:25:33: #2 Since the d (103) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:25:33: #2 You may need to consider one of the other alternative d(s): 103,598 WARNING @ Sat, 03 Apr 2021 07:25:33: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:25:33: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:25:33: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:25:42: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:25:55: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.10_peaks.xls INFO @ Sat, 03 Apr 2021 07:25:55: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:25:55: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.10_summits.bed INFO @ Sat, 03 Apr 2021 07:25:55: Done! pass1 - making usageList (7 chroms): 2 millis pass2 - checking and writing primary data (5430 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:25:59: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:26:13: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.20_peaks.xls INFO @ Sat, 03 Apr 2021 07:26:13: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:26:13: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX3029126/SRX3029126.20_summits.bed INFO @ Sat, 03 Apr 2021 07:26:13: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (2216 records, 4 fields): 15 millis CompletedMACS2peakCalling