Job ID = 10714373 sra ファイルのダウンロード中... Completed: 11124508K bytes transferred in 882 seconds (103316K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 76090285 spots for /home/okishinya/chipatlas/results/ce10/SRX2985938/SRR5807088.sra Written 76090285 spots for /home/okishinya/chipatlas/results/ce10/SRX2985938/SRR5807088.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:24:27 76090285 reads; of these: 76090285 (100.00%) were paired; of these: 1267602 (1.67%) aligned concordantly 0 times 63678342 (83.69%) aligned concordantly exactly 1 time 11144341 (14.65%) aligned concordantly >1 times ---- 1267602 pairs aligned concordantly 0 times; of these: 169864 (13.40%) aligned discordantly 1 time ---- 1097738 pairs aligned 0 times concordantly or discordantly; of these: 2195476 mates make up the pairs; of these: 1414455 (64.43%) aligned 0 times 517507 (23.57%) aligned exactly 1 time 263514 (12.00%) aligned >1 times 99.07% overall alignment rate Time searching: 02:24:28 Overall time: 02:24:28 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 64 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 1750987 / 74923155 = 0.0234 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 03 Jun 2018 16:25:35: # Command line: callpeak -t SRX2985938.bam -f BAM -g ce -n SRX2985938.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX2985938.05 # format = BAM # ChIP-seq file = ['SRX2985938.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 16:25:35: # Command line: callpeak -t SRX2985938.bam -f BAM -g ce -n SRX2985938.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX2985938.20 # format = BAM # ChIP-seq file = ['SRX2985938.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 16:25:35: # Command line: callpeak -t SRX2985938.bam -f BAM -g ce -n SRX2985938.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX2985938.10 # format = BAM # ChIP-seq file = ['SRX2985938.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 16:25:35: #1 read tag files... INFO @ Sun, 03 Jun 2018 16:25:35: #1 read tag files... INFO @ Sun, 03 Jun 2018 16:25:35: #1 read tag files... INFO @ Sun, 03 Jun 2018 16:25:35: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 16:25:35: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 16:25:35: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 16:25:44: 1000000 INFO @ Sun, 03 Jun 2018 16:25:44: 1000000 INFO @ Sun, 03 Jun 2018 16:25:44: 1000000 INFO @ Sun, 03 Jun 2018 16:25:52: 2000000 INFO @ Sun, 03 Jun 2018 16:25:53: 2000000 INFO @ Sun, 03 Jun 2018 16:25:53: 2000000 INFO @ Sun, 03 Jun 2018 16:26:01: 3000000 INFO @ Sun, 03 Jun 2018 16:26:02: 3000000 INFO @ Sun, 03 Jun 2018 16:26:02: 3000000 INFO @ Sun, 03 Jun 2018 16:26:09: 4000000 INFO @ Sun, 03 Jun 2018 16:26:10: 4000000 INFO @ Sun, 03 Jun 2018 16:26:11: 4000000 INFO @ Sun, 03 Jun 2018 16:26:17: 5000000 INFO @ Sun, 03 Jun 2018 16:26:19: 5000000 INFO @ Sun, 03 Jun 2018 16:26:19: 5000000 INFO @ Sun, 03 Jun 2018 16:26:25: 6000000 INFO @ Sun, 03 Jun 2018 16:26:28: 6000000 INFO @ Sun, 03 Jun 2018 16:26:28: 6000000 INFO @ Sun, 03 Jun 2018 16:26:34: 7000000 INFO @ Sun, 03 Jun 2018 16:26:36: 7000000 INFO @ Sun, 03 Jun 2018 16:26:36: 7000000 INFO @ Sun, 03 Jun 2018 16:26:42: 8000000 INFO @ Sun, 03 Jun 2018 16:26:45: 8000000 INFO @ Sun, 03 Jun 2018 16:26:45: 8000000 INFO @ Sun, 03 Jun 2018 16:26:50: 9000000 INFO @ Sun, 03 Jun 2018 16:26:53: 9000000 INFO @ Sun, 03 Jun 2018 16:26:53: 9000000 INFO @ Sun, 03 Jun 2018 16:26:58: 10000000 INFO @ Sun, 03 Jun 2018 16:27:02: 10000000 INFO @ Sun, 03 Jun 2018 16:27:02: 10000000 INFO @ Sun, 03 Jun 2018 16:27:06: 11000000 INFO @ Sun, 03 Jun 2018 16:27:11: 11000000 INFO @ Sun, 03 Jun 2018 16:27:11: 11000000 INFO @ Sun, 03 Jun 2018 16:27:15: 12000000 INFO @ Sun, 03 Jun 2018 16:27:19: 12000000 INFO @ Sun, 03 Jun 2018 16:27:20: 12000000 INFO @ Sun, 03 Jun 2018 16:27:23: 13000000 INFO @ Sun, 03 Jun 2018 16:27:28: 13000000 INFO @ Sun, 03 Jun 2018 16:27:28: 13000000 INFO @ Sun, 03 Jun 2018 16:27:31: 14000000 INFO @ Sun, 03 Jun 2018 16:27:37: 14000000 INFO @ Sun, 03 Jun 2018 16:27:37: 14000000 INFO @ Sun, 03 Jun 2018 16:27:39: 15000000 INFO @ Sun, 03 Jun 2018 16:27:45: 15000000 INFO @ Sun, 03 Jun 2018 16:27:46: 15000000 INFO @ Sun, 03 Jun 2018 16:27:47: 16000000 INFO @ Sun, 03 Jun 2018 16:27:54: 16000000 INFO @ Sun, 03 Jun 2018 16:27:54: 16000000 INFO @ Sun, 03 Jun 2018 16:27:55: 17000000 INFO @ Sun, 03 Jun 2018 16:28:02: 17000000 INFO @ Sun, 03 Jun 2018 16:28:03: 17000000 INFO @ Sun, 03 Jun 2018 16:28:03: 18000000 INFO @ Sun, 03 Jun 2018 16:28:11: 18000000 INFO @ Sun, 03 Jun 2018 16:28:11: 18000000 INFO @ Sun, 03 Jun 2018 16:28:12: 19000000 INFO @ Sun, 03 Jun 2018 16:28:19: 19000000 INFO @ Sun, 03 Jun 2018 16:28:20: 19000000 INFO @ Sun, 03 Jun 2018 16:28:20: 20000000 INFO @ Sun, 03 Jun 2018 16:28:28: 21000000 INFO @ Sun, 03 Jun 2018 16:28:28: 20000000 INFO @ Sun, 03 Jun 2018 16:28:28: 20000000 INFO @ Sun, 03 Jun 2018 16:28:36: 22000000 INFO @ Sun, 03 Jun 2018 16:28:37: 21000000 INFO @ Sun, 03 Jun 2018 16:28:37: 21000000 INFO @ Sun, 03 Jun 2018 16:28:44: 23000000 INFO @ Sun, 03 Jun 2018 16:28:45: 22000000 INFO @ Sun, 03 Jun 2018 16:28:45: 22000000 INFO @ Sun, 03 Jun 2018 16:28:52: 24000000 INFO @ Sun, 03 Jun 2018 16:28:54: 23000000 INFO @ Sun, 03 Jun 2018 16:28:54: 23000000 INFO @ Sun, 03 Jun 2018 16:29:00: 25000000 INFO @ Sun, 03 Jun 2018 16:29:02: 24000000 INFO @ Sun, 03 Jun 2018 16:29:02: 24000000 INFO @ Sun, 03 Jun 2018 16:29:08: 26000000 INFO @ Sun, 03 Jun 2018 16:29:11: 25000000 INFO @ Sun, 03 Jun 2018 16:29:11: 25000000 INFO @ Sun, 03 Jun 2018 16:29:17: 27000000 INFO @ Sun, 03 Jun 2018 16:29:19: 26000000 INFO @ Sun, 03 Jun 2018 16:29:20: 26000000 INFO @ Sun, 03 Jun 2018 16:29:26: 28000000 INFO @ Sun, 03 Jun 2018 16:29:27: 27000000 INFO @ Sun, 03 Jun 2018 16:29:29: 27000000 INFO @ Sun, 03 Jun 2018 16:29:35: 29000000 INFO @ Sun, 03 Jun 2018 16:29:36: 28000000 INFO @ Sun, 03 Jun 2018 16:29:38: 28000000 INFO @ Sun, 03 Jun 2018 16:29:44: 29000000 INFO @ Sun, 03 Jun 2018 16:29:44: 30000000 INFO @ Sun, 03 Jun 2018 16:29:47: 29000000 INFO @ Sun, 03 Jun 2018 16:29:52: 30000000 INFO @ Sun, 03 Jun 2018 16:29:53: 31000000 INFO @ Sun, 03 Jun 2018 16:29:56: 30000000 INFO @ Sun, 03 Jun 2018 16:30:00: 31000000 INFO @ Sun, 03 Jun 2018 16:30:02: 32000000 INFO @ Sun, 03 Jun 2018 16:30:04: 31000000 INFO @ Sun, 03 Jun 2018 16:30:08: 32000000 INFO @ Sun, 03 Jun 2018 16:30:11: 33000000 INFO @ Sun, 03 Jun 2018 16:30:13: 32000000 INFO @ Sun, 03 Jun 2018 16:30:16: 33000000 INFO @ Sun, 03 Jun 2018 16:30:20: 34000000 INFO @ Sun, 03 Jun 2018 16:30:22: 33000000 INFO @ Sun, 03 Jun 2018 16:30:24: 34000000 INFO @ Sun, 03 Jun 2018 16:30:29: 35000000 INFO @ Sun, 03 Jun 2018 16:30:31: 34000000 INFO @ Sun, 03 Jun 2018 16:30:32: 35000000 INFO @ Sun, 03 Jun 2018 16:30:37: 36000000 INFO @ Sun, 03 Jun 2018 16:30:40: 35000000 INFO @ Sun, 03 Jun 2018 16:30:40: 36000000 INFO @ Sun, 03 Jun 2018 16:30:46: 37000000 INFO @ Sun, 03 Jun 2018 16:30:48: 37000000 INFO @ Sun, 03 Jun 2018 16:30:49: 36000000 INFO @ Sun, 03 Jun 2018 16:30:55: 38000000 INFO @ Sun, 03 Jun 2018 16:30:57: 38000000 INFO @ Sun, 03 Jun 2018 16:30:58: 37000000 INFO @ Sun, 03 Jun 2018 16:31:04: 39000000 INFO @ Sun, 03 Jun 2018 16:31:05: 39000000 INFO @ Sun, 03 Jun 2018 16:31:07: 38000000 INFO @ Sun, 03 Jun 2018 16:31:13: 40000000 INFO @ Sun, 03 Jun 2018 16:31:13: 40000000 INFO @ Sun, 03 Jun 2018 16:31:16: 39000000 INFO @ Sun, 03 Jun 2018 16:31:21: 41000000 INFO @ Sun, 03 Jun 2018 16:31:22: 41000000 INFO @ Sun, 03 Jun 2018 16:31:24: 40000000 INFO @ Sun, 03 Jun 2018 16:31:29: 42000000 INFO @ Sun, 03 Jun 2018 16:31:31: 42000000 INFO @ Sun, 03 Jun 2018 16:31:33: 41000000 INFO @ Sun, 03 Jun 2018 16:31:37: 43000000 INFO @ Sun, 03 Jun 2018 16:31:40: 43000000 INFO @ Sun, 03 Jun 2018 16:31:42: 42000000 INFO @ Sun, 03 Jun 2018 16:31:45: 44000000 INFO @ Sun, 03 Jun 2018 16:31:48: 44000000 INFO @ Sun, 03 Jun 2018 16:31:51: 43000000 INFO @ Sun, 03 Jun 2018 16:31:53: 45000000 INFO @ Sun, 03 Jun 2018 16:31:57: 45000000 INFO @ Sun, 03 Jun 2018 16:32:00: 44000000 INFO @ Sun, 03 Jun 2018 16:32:02: 46000000 INFO @ Sun, 03 Jun 2018 16:32:06: 46000000 INFO @ Sun, 03 Jun 2018 16:32:08: 45000000 INFO @ Sun, 03 Jun 2018 16:32:10: 47000000 INFO @ Sun, 03 Jun 2018 16:32:14: 47000000 INFO @ Sun, 03 Jun 2018 16:32:17: 46000000 INFO @ Sun, 03 Jun 2018 16:32:18: 48000000 INFO @ Sun, 03 Jun 2018 16:32:23: 48000000 INFO @ Sun, 03 Jun 2018 16:32:26: 47000000 INFO @ Sun, 03 Jun 2018 16:32:26: 49000000 INFO @ Sun, 03 Jun 2018 16:32:32: 49000000 INFO @ Sun, 03 Jun 2018 16:32:34: 50000000 INFO @ Sun, 03 Jun 2018 16:32:34: 48000000 INFO @ Sun, 03 Jun 2018 16:32:40: 50000000 INFO @ Sun, 03 Jun 2018 16:32:42: 51000000 INFO @ Sun, 03 Jun 2018 16:32:43: 49000000 INFO @ Sun, 03 Jun 2018 16:32:49: 51000000 INFO @ Sun, 03 Jun 2018 16:32:50: 52000000 INFO @ Sun, 03 Jun 2018 16:32:52: 50000000 INFO @ Sun, 03 Jun 2018 16:32:58: 52000000 INFO @ Sun, 03 Jun 2018 16:32:59: 53000000 INFO @ Sun, 03 Jun 2018 16:33:01: 51000000 INFO @ Sun, 03 Jun 2018 16:33:06: 53000000 INFO @ Sun, 03 Jun 2018 16:33:07: 54000000 INFO @ Sun, 03 Jun 2018 16:33:09: 52000000 INFO @ Sun, 03 Jun 2018 16:33:15: 55000000 INFO @ Sun, 03 Jun 2018 16:33:15: 54000000 INFO @ Sun, 03 Jun 2018 16:33:18: 53000000 INFO @ Sun, 03 Jun 2018 16:33:23: 56000000 INFO @ Sun, 03 Jun 2018 16:33:24: 55000000 INFO @ Sun, 03 Jun 2018 16:33:27: 54000000 INFO @ Sun, 03 Jun 2018 16:33:31: 57000000 INFO @ Sun, 03 Jun 2018 16:33:32: 56000000 INFO @ Sun, 03 Jun 2018 16:33:35: 55000000 INFO @ Sun, 03 Jun 2018 16:33:39: 58000000 INFO @ Sun, 03 Jun 2018 16:33:41: 57000000 INFO @ Sun, 03 Jun 2018 16:33:44: 56000000 INFO @ Sun, 03 Jun 2018 16:33:47: 59000000 INFO @ Sun, 03 Jun 2018 16:33:50: 58000000 INFO @ Sun, 03 Jun 2018 16:33:53: 57000000 INFO @ Sun, 03 Jun 2018 16:33:55: 60000000 INFO @ Sun, 03 Jun 2018 16:33:58: 59000000 INFO @ Sun, 03 Jun 2018 16:34:01: 58000000 INFO @ Sun, 03 Jun 2018 16:34:04: 61000000 INFO @ Sun, 03 Jun 2018 16:34:07: 60000000 INFO @ Sun, 03 Jun 2018 16:34:10: 59000000 INFO @ Sun, 03 Jun 2018 16:34:12: 62000000 INFO @ Sun, 03 Jun 2018 16:34:15: 61000000 INFO @ Sun, 03 Jun 2018 16:34:19: 60000000 INFO @ Sun, 03 Jun 2018 16:34:20: 63000000 INFO @ Sun, 03 Jun 2018 16:34:24: 62000000 INFO @ Sun, 03 Jun 2018 16:34:27: 61000000 INFO @ Sun, 03 Jun 2018 16:34:28: 64000000 INFO @ Sun, 03 Jun 2018 16:34:33: 63000000 INFO @ Sun, 03 Jun 2018 16:34:36: 62000000 INFO @ Sun, 03 Jun 2018 16:34:36: 65000000 INFO @ Sun, 03 Jun 2018 16:34:41: 64000000 INFO @ Sun, 03 Jun 2018 16:34:44: 66000000 INFO @ Sun, 03 Jun 2018 16:34:44: 63000000 INFO @ Sun, 03 Jun 2018 16:34:50: 65000000 INFO @ Sun, 03 Jun 2018 16:34:53: 67000000 INFO @ Sun, 03 Jun 2018 16:34:53: 64000000 INFO @ Sun, 03 Jun 2018 16:34:59: 66000000 INFO @ Sun, 03 Jun 2018 16:35:01: 68000000 INFO @ Sun, 03 Jun 2018 16:35:02: 65000000 INFO @ Sun, 03 Jun 2018 16:35:07: 67000000 INFO @ Sun, 03 Jun 2018 16:35:09: 69000000 INFO @ Sun, 03 Jun 2018 16:35:10: 66000000 INFO @ Sun, 03 Jun 2018 16:35:16: 68000000 INFO @ Sun, 03 Jun 2018 16:35:17: 70000000 INFO @ Sun, 03 Jun 2018 16:35:19: 67000000 INFO @ Sun, 03 Jun 2018 16:35:25: 69000000 INFO @ Sun, 03 Jun 2018 16:35:25: 71000000 INFO @ Sun, 03 Jun 2018 16:35:28: 68000000 INFO @ Sun, 03 Jun 2018 16:35:33: 70000000 INFO @ Sun, 03 Jun 2018 16:35:34: 72000000 INFO @ Sun, 03 Jun 2018 16:35:36: 69000000 INFO @ Sun, 03 Jun 2018 16:35:42: 73000000 INFO @ Sun, 03 Jun 2018 16:35:42: 71000000 INFO @ Sun, 03 Jun 2018 16:35:45: 70000000 INFO @ Sun, 03 Jun 2018 16:35:50: 74000000 INFO @ Sun, 03 Jun 2018 16:35:51: 72000000 INFO @ Sun, 03 Jun 2018 16:35:54: 71000000 INFO @ Sun, 03 Jun 2018 16:35:58: 75000000 INFO @ Sun, 03 Jun 2018 16:35:59: 73000000 INFO @ Sun, 03 Jun 2018 16:36:02: 72000000 INFO @ Sun, 03 Jun 2018 16:36:06: 76000000 INFO @ Sun, 03 Jun 2018 16:36:08: 74000000 INFO @ Sun, 03 Jun 2018 16:36:11: 73000000 INFO @ Sun, 03 Jun 2018 16:36:15: 77000000 INFO @ Sun, 03 Jun 2018 16:36:16: 75000000 INFO @ Sun, 03 Jun 2018 16:36:20: 74000000 INFO @ Sun, 03 Jun 2018 16:36:24: 78000000 INFO @ Sun, 03 Jun 2018 16:36:24: 76000000 INFO @ Sun, 03 Jun 2018 16:36:28: 75000000 INFO @ Sun, 03 Jun 2018 16:36:32: 77000000 INFO @ Sun, 03 Jun 2018 16:36:32: 79000000 INFO @ Sun, 03 Jun 2018 16:36:37: 76000000 INFO @ Sun, 03 Jun 2018 16:36:40: 78000000 INFO @ Sun, 03 Jun 2018 16:36:41: 80000000 INFO @ Sun, 03 Jun 2018 16:36:45: 77000000 INFO @ Sun, 03 Jun 2018 16:36:48: 79000000 INFO @ Sun, 03 Jun 2018 16:36:49: 81000000 INFO @ Sun, 03 Jun 2018 16:36:54: 78000000 INFO @ Sun, 03 Jun 2018 16:36:56: 80000000 INFO @ Sun, 03 Jun 2018 16:36:58: 82000000 INFO @ Sun, 03 Jun 2018 16:37:03: 79000000 INFO @ Sun, 03 Jun 2018 16:37:05: 81000000 INFO @ Sun, 03 Jun 2018 16:37:07: 83000000 INFO @ Sun, 03 Jun 2018 16:37:11: 80000000 INFO @ Sun, 03 Jun 2018 16:37:13: 82000000 INFO @ Sun, 03 Jun 2018 16:37:15: 84000000 INFO @ Sun, 03 Jun 2018 16:37:20: 81000000 INFO @ Sun, 03 Jun 2018 16:37:21: 83000000 INFO @ Sun, 03 Jun 2018 16:37:24: 85000000 INFO @ Sun, 03 Jun 2018 16:37:28: 82000000 INFO @ Sun, 03 Jun 2018 16:37:29: 84000000 INFO @ Sun, 03 Jun 2018 16:37:32: 86000000 INFO @ Sun, 03 Jun 2018 16:37:37: 85000000 INFO @ Sun, 03 Jun 2018 16:37:37: 83000000 INFO @ Sun, 03 Jun 2018 16:37:41: 87000000 INFO @ Sun, 03 Jun 2018 16:37:45: 86000000 INFO @ Sun, 03 Jun 2018 16:37:46: 84000000 INFO @ Sun, 03 Jun 2018 16:37:50: 88000000 INFO @ Sun, 03 Jun 2018 16:37:53: 87000000 INFO @ Sun, 03 Jun 2018 16:37:54: 85000000 INFO @ Sun, 03 Jun 2018 16:37:58: 89000000 INFO @ Sun, 03 Jun 2018 16:38:01: 88000000 INFO @ Sun, 03 Jun 2018 16:38:03: 86000000 INFO @ Sun, 03 Jun 2018 16:38:07: 90000000 INFO @ Sun, 03 Jun 2018 16:38:10: 89000000 INFO @ Sun, 03 Jun 2018 16:38:11: 87000000 INFO @ Sun, 03 Jun 2018 16:38:15: 91000000 INFO @ Sun, 03 Jun 2018 16:38:18: 90000000 INFO @ Sun, 03 Jun 2018 16:38:20: 88000000 INFO @ Sun, 03 Jun 2018 16:38:24: 92000000 INFO @ Sun, 03 Jun 2018 16:38:26: 91000000 INFO @ Sun, 03 Jun 2018 16:38:29: 89000000 INFO @ Sun, 03 Jun 2018 16:38:33: 93000000 INFO @ Sun, 03 Jun 2018 16:38:34: 92000000 INFO @ Sun, 03 Jun 2018 16:38:37: 90000000 INFO @ Sun, 03 Jun 2018 16:38:41: 94000000 INFO @ Sun, 03 Jun 2018 16:38:42: 93000000 INFO @ Sun, 03 Jun 2018 16:38:46: 91000000 INFO @ Sun, 03 Jun 2018 16:38:50: 95000000 INFO @ Sun, 03 Jun 2018 16:38:51: 94000000 INFO @ Sun, 03 Jun 2018 16:38:54: 92000000 INFO @ Sun, 03 Jun 2018 16:38:59: 96000000 INFO @ Sun, 03 Jun 2018 16:39:00: 95000000 INFO @ Sun, 03 Jun 2018 16:39:02: 93000000 INFO @ Sun, 03 Jun 2018 16:39:08: 97000000 INFO @ Sun, 03 Jun 2018 16:39:08: 96000000 INFO @ Sun, 03 Jun 2018 16:39:10: 94000000 INFO @ Sun, 03 Jun 2018 16:39:17: 98000000 INFO @ Sun, 03 Jun 2018 16:39:17: 97000000 INFO @ Sun, 03 Jun 2018 16:39:18: 95000000 INFO @ Sun, 03 Jun 2018 16:39:25: 99000000 INFO @ Sun, 03 Jun 2018 16:39:26: 98000000 INFO @ Sun, 03 Jun 2018 16:39:27: 96000000 INFO @ Sun, 03 Jun 2018 16:39:34: 99000000 INFO @ Sun, 03 Jun 2018 16:39:34: 100000000 INFO @ Sun, 03 Jun 2018 16:39:35: 97000000 INFO @ Sun, 03 Jun 2018 16:39:42: 100000000 INFO @ Sun, 03 Jun 2018 16:39:43: 101000000 INFO @ Sun, 03 Jun 2018 16:39:44: 98000000 INFO @ Sun, 03 Jun 2018 16:39:50: 101000000 INFO @ Sun, 03 Jun 2018 16:39:51: 102000000 INFO @ Sun, 03 Jun 2018 16:39:53: 99000000 INFO @ Sun, 03 Jun 2018 16:39:58: 102000000 INFO @ Sun, 03 Jun 2018 16:40:00: 103000000 INFO @ Sun, 03 Jun 2018 16:40:01: 100000000 INFO @ Sun, 03 Jun 2018 16:40:06: 103000000 INFO @ Sun, 03 Jun 2018 16:40:08: 104000000 INFO @ Sun, 03 Jun 2018 16:40:10: 101000000 INFO @ Sun, 03 Jun 2018 16:40:14: 104000000 INFO @ Sun, 03 Jun 2018 16:40:17: 105000000 INFO @ Sun, 03 Jun 2018 16:40:18: 102000000 INFO @ Sun, 03 Jun 2018 16:40:22: 105000000 INFO @ Sun, 03 Jun 2018 16:40:25: 106000000 INFO @ Sun, 03 Jun 2018 16:40:27: 103000000 INFO @ Sun, 03 Jun 2018 16:40:31: 106000000 INFO @ Sun, 03 Jun 2018 16:40:34: 107000000 INFO @ Sun, 03 Jun 2018 16:40:35: 104000000 INFO @ Sun, 03 Jun 2018 16:40:39: 107000000 INFO @ Sun, 03 Jun 2018 16:40:43: 108000000 INFO @ Sun, 03 Jun 2018 16:40:44: 105000000 INFO @ Sun, 03 Jun 2018 16:40:47: 108000000 INFO @ Sun, 03 Jun 2018 16:40:51: 109000000 INFO @ Sun, 03 Jun 2018 16:40:53: 106000000 INFO @ Sun, 03 Jun 2018 16:40:55: 109000000 INFO @ Sun, 03 Jun 2018 16:41:00: 110000000 INFO @ Sun, 03 Jun 2018 16:41:01: 107000000 INFO @ Sun, 03 Jun 2018 16:41:03: 110000000 INFO @ Sun, 03 Jun 2018 16:41:08: 111000000 INFO @ Sun, 03 Jun 2018 16:41:10: 108000000 INFO @ Sun, 03 Jun 2018 16:41:11: 111000000 INFO @ Sun, 03 Jun 2018 16:41:17: 112000000 INFO @ Sun, 03 Jun 2018 16:41:18: 109000000 INFO @ Sun, 03 Jun 2018 16:41:19: 112000000 INFO @ Sun, 03 Jun 2018 16:41:25: 113000000 INFO @ Sun, 03 Jun 2018 16:41:27: 110000000 INFO @ Sun, 03 Jun 2018 16:41:27: 113000000 INFO @ Sun, 03 Jun 2018 16:41:34: 114000000 INFO @ Sun, 03 Jun 2018 16:41:35: 111000000 INFO @ Sun, 03 Jun 2018 16:41:35: 114000000 INFO @ Sun, 03 Jun 2018 16:41:43: 115000000 INFO @ Sun, 03 Jun 2018 16:41:44: 115000000 INFO @ Sun, 03 Jun 2018 16:41:44: 112000000 INFO @ Sun, 03 Jun 2018 16:41:51: 116000000 INFO @ Sun, 03 Jun 2018 16:41:52: 116000000 INFO @ Sun, 03 Jun 2018 16:41:53: 113000000 INFO @ Sun, 03 Jun 2018 16:42:00: 117000000 INFO @ Sun, 03 Jun 2018 16:42:00: 117000000 INFO @ Sun, 03 Jun 2018 16:42:01: 114000000 INFO @ Sun, 03 Jun 2018 16:42:08: 118000000 INFO @ Sun, 03 Jun 2018 16:42:08: 118000000 INFO @ Sun, 03 Jun 2018 16:42:10: 115000000 INFO @ Sun, 03 Jun 2018 16:42:16: 119000000 INFO @ Sun, 03 Jun 2018 16:42:17: 119000000 INFO @ Sun, 03 Jun 2018 16:42:18: 116000000 INFO @ Sun, 03 Jun 2018 16:42:24: 120000000 INFO @ Sun, 03 Jun 2018 16:42:26: 120000000 INFO @ Sun, 03 Jun 2018 16:42:27: 117000000 INFO @ Sun, 03 Jun 2018 16:42:33: 121000000 INFO @ Sun, 03 Jun 2018 16:42:34: 121000000 INFO @ Sun, 03 Jun 2018 16:42:36: 118000000 INFO @ Sun, 03 Jun 2018 16:42:41: 122000000 INFO @ Sun, 03 Jun 2018 16:42:43: 122000000 INFO @ Sun, 03 Jun 2018 16:42:44: 119000000 INFO @ Sun, 03 Jun 2018 16:42:49: 123000000 INFO @ Sun, 03 Jun 2018 16:42:51: 123000000 INFO @ Sun, 03 Jun 2018 16:42:53: 120000000 INFO @ Sun, 03 Jun 2018 16:42:57: 124000000 INFO @ Sun, 03 Jun 2018 16:43:00: 124000000 INFO @ Sun, 03 Jun 2018 16:43:01: 121000000 INFO @ Sun, 03 Jun 2018 16:43:05: 125000000 INFO @ Sun, 03 Jun 2018 16:43:09: 125000000 INFO @ Sun, 03 Jun 2018 16:43:10: 122000000 INFO @ Sun, 03 Jun 2018 16:43:13: 126000000 INFO @ Sun, 03 Jun 2018 16:43:17: 126000000 INFO @ Sun, 03 Jun 2018 16:43:19: 123000000 INFO @ Sun, 03 Jun 2018 16:43:21: 127000000 INFO @ Sun, 03 Jun 2018 16:43:26: 127000000 INFO @ Sun, 03 Jun 2018 16:43:27: 124000000 INFO @ Sun, 03 Jun 2018 16:43:29: 128000000 INFO @ Sun, 03 Jun 2018 16:43:34: 128000000 INFO @ Sun, 03 Jun 2018 16:43:36: 125000000 INFO @ Sun, 03 Jun 2018 16:43:38: 129000000 INFO @ Sun, 03 Jun 2018 16:43:43: 129000000 INFO @ Sun, 03 Jun 2018 16:43:45: 126000000 INFO @ Sun, 03 Jun 2018 16:43:46: 130000000 INFO @ Sun, 03 Jun 2018 16:43:52: 130000000 INFO @ Sun, 03 Jun 2018 16:43:53: 127000000 INFO @ Sun, 03 Jun 2018 16:43:54: 131000000 INFO @ Sun, 03 Jun 2018 16:44:00: 131000000 INFO @ Sun, 03 Jun 2018 16:44:02: 128000000 INFO @ Sun, 03 Jun 2018 16:44:02: 132000000 INFO @ Sun, 03 Jun 2018 16:44:09: 132000000 INFO @ Sun, 03 Jun 2018 16:44:10: 133000000 INFO @ Sun, 03 Jun 2018 16:44:10: 129000000 INFO @ Sun, 03 Jun 2018 16:44:17: 133000000 INFO @ Sun, 03 Jun 2018 16:44:18: 134000000 INFO @ Sun, 03 Jun 2018 16:44:19: 130000000 INFO @ Sun, 03 Jun 2018 16:44:26: 134000000 INFO @ Sun, 03 Jun 2018 16:44:26: 135000000 INFO @ Sun, 03 Jun 2018 16:44:27: 131000000 INFO @ Sun, 03 Jun 2018 16:44:34: 136000000 INFO @ Sun, 03 Jun 2018 16:44:35: 135000000 INFO @ Sun, 03 Jun 2018 16:44:36: 132000000 INFO @ Sun, 03 Jun 2018 16:44:43: 137000000 INFO @ Sun, 03 Jun 2018 16:44:43: 136000000 INFO @ Sun, 03 Jun 2018 16:44:45: 133000000 INFO @ Sun, 03 Jun 2018 16:44:51: 138000000 INFO @ Sun, 03 Jun 2018 16:44:52: 137000000 INFO @ Sun, 03 Jun 2018 16:44:53: 134000000 INFO @ Sun, 03 Jun 2018 16:44:59: 139000000 INFO @ Sun, 03 Jun 2018 16:45:00: 138000000 INFO @ Sun, 03 Jun 2018 16:45:02: 135000000 INFO @ Sun, 03 Jun 2018 16:45:07: 140000000 INFO @ Sun, 03 Jun 2018 16:45:09: 139000000 INFO @ Sun, 03 Jun 2018 16:45:10: 136000000 INFO @ Sun, 03 Jun 2018 16:45:15: 141000000 INFO @ Sun, 03 Jun 2018 16:45:18: 140000000 INFO @ Sun, 03 Jun 2018 16:45:19: 137000000 INFO @ Sun, 03 Jun 2018 16:45:23: 142000000 INFO @ Sun, 03 Jun 2018 16:45:26: 141000000 INFO @ Sun, 03 Jun 2018 16:45:28: 138000000 INFO @ Sun, 03 Jun 2018 16:45:31: 143000000 INFO @ Sun, 03 Jun 2018 16:45:35: 142000000 INFO @ Sun, 03 Jun 2018 16:45:36: 139000000 INFO @ Sun, 03 Jun 2018 16:45:39: 144000000 INFO @ Sun, 03 Jun 2018 16:45:43: 143000000 INFO @ Sun, 03 Jun 2018 16:45:45: 140000000 INFO @ Sun, 03 Jun 2018 16:45:48: 145000000 INFO @ Sun, 03 Jun 2018 16:45:52: 144000000 INFO @ Sun, 03 Jun 2018 16:45:53: 141000000 INFO @ Sun, 03 Jun 2018 16:45:56: 146000000 INFO @ Sun, 03 Jun 2018 16:46:01: 145000000 INFO @ Sun, 03 Jun 2018 16:46:02: 142000000 INFO @ Sun, 03 Jun 2018 16:46:04: 147000000 INFO @ Sun, 03 Jun 2018 16:46:07: #1 tag size is determined as 101 bps INFO @ Sun, 03 Jun 2018 16:46:07: #1 tag size = 101 INFO @ Sun, 03 Jun 2018 16:46:07: #1 total tags in treatment: 73075272 INFO @ Sun, 03 Jun 2018 16:46:07: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 16:46:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 16:46:08: #1 tags after filtering in treatment: 56825011 INFO @ Sun, 03 Jun 2018 16:46:08: #1 Redundant rate of treatment: 0.22 INFO @ Sun, 03 Jun 2018 16:46:08: #1 finished! INFO @ Sun, 03 Jun 2018 16:46:08: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 16:46:08: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 16:46:09: 146000000 INFO @ Sun, 03 Jun 2018 16:46:11: 143000000 INFO @ Sun, 03 Jun 2018 16:46:12: #2 number of paired peaks: 0 WARNING @ Sun, 03 Jun 2018 16:46:12: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 16:46:12: Process for pairing-model is terminated! cat: SRX2985938.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX2985938.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX2985938.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX2985938.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 16:46:18: 147000000 INFO @ Sun, 03 Jun 2018 16:46:19: 144000000 INFO @ Sun, 03 Jun 2018 16:46:21: #1 tag size is determined as 101 bps INFO @ Sun, 03 Jun 2018 16:46:21: #1 tag size = 101 INFO @ Sun, 03 Jun 2018 16:46:21: #1 total tags in treatment: 73075272 INFO @ Sun, 03 Jun 2018 16:46:21: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 16:46:21: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 16:46:22: #1 tags after filtering in treatment: 56825011 INFO @ Sun, 03 Jun 2018 16:46:22: #1 Redundant rate of treatment: 0.22 INFO @ Sun, 03 Jun 2018 16:46:22: #1 finished! INFO @ Sun, 03 Jun 2018 16:46:22: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 16:46:22: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 16:46:26: #2 number of paired peaks: 0 WARNING @ Sun, 03 Jun 2018 16:46:26: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 16:46:26: Process for pairing-model is terminated! cat: SRX2985938.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX2985938.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX2985938.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX2985938.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 16:46:27: 145000000 INFO @ Sun, 03 Jun 2018 16:46:35: 146000000 INFO @ Sun, 03 Jun 2018 16:46:43: 147000000 INFO @ Sun, 03 Jun 2018 16:46:46: #1 tag size is determined as 101 bps INFO @ Sun, 03 Jun 2018 16:46:46: #1 tag size = 101 INFO @ Sun, 03 Jun 2018 16:46:46: #1 total tags in treatment: 73075272 INFO @ Sun, 03 Jun 2018 16:46:46: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 16:46:46: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 16:46:48: #1 tags after filtering in treatment: 56825011 INFO @ Sun, 03 Jun 2018 16:46:48: #1 Redundant rate of treatment: 0.22 INFO @ Sun, 03 Jun 2018 16:46:48: #1 finished! INFO @ Sun, 03 Jun 2018 16:46:48: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 16:46:48: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 16:46:51: #2 number of paired peaks: 0 WARNING @ Sun, 03 Jun 2018 16:46:51: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 16:46:51: Process for pairing-model is terminated! cat: SRX2985938.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX2985938.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX2985938.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX2985938.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。