Job ID = 1291776 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2019-06-02T07:25:30 fasterq-dump.2.9.6 sys: connection not found while validating within network system module - Failed to Make Connection in KClientHttpOpen to 'sra-download-internal.ncbi.nlm.nih.gov:443' 2019-06-02T07:25:30 fasterq-dump.2.9.6 err: connection not found while validating within network system module - error with https open 'https://sra-download-internal.ncbi.nlm.nih.gov/traces/sra8/SRR/000748/SRR766201' 2019-06-02T07:25:39 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_tbl().VDBManagerOpenTableRead( 'SRR766201' ) -> RC(rcDB,rcMgr,rcOpening,rcTable,rcIncorrect) 2019-06-02T07:25:39 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcDB,rcMgr,rcOpening,rcTable,rcIncorrect) spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 2019-06-02T07:30:40 fasterq-dump.2.9.6 sys: connection not found while validating within network system module - Failed to Make Connection in KClientHttpOpen to 'sra-download-internal.ncbi.nlm.nih.gov:443' 2019-06-02T07:30:40 fasterq-dump.2.9.6 err: connection not found while validating within network system module - error with https open 'https://sra-download-internal.ncbi.nlm.nih.gov/traces/sra8/SRR/000748/SRR766202' 2019-06-02T07:30:50 fasterq-dump.2.9.6 err: cmn_iter.c cmn_get_acc_type( 'SRR766202', 'NAME' ).VDBManagerOpenTableRead() -> RC(rcDB,rcMgr,rcOpening,rcTable,rcIncorrect) spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 2019-06-02T07:45:59 fasterq-dump.2.9.6 sys: connection not found while validating within network system module - Failed to Make Connection in KClientHttpOpen to 'sra-download-internal.ncbi.nlm.nih.gov:443' 2019-06-02T07:45:59 fasterq-dump.2.9.6 err: connection not found while validating within network system module - error with https open 'https://sra-download-internal.ncbi.nlm.nih.gov/traces/sra8/SRR/000748/SRR766207' 2019-06-02T07:46:08 fasterq-dump.2.9.6 err: cmn_iter.c cmn_get_acc_type( 'SRR766207', 'NAME' ).VDBManagerOpenTableRead() -> RC(rcDB,rcMgr,rcOpening,rcTable,rcIncorrect) spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 2019-06-02T07:55:21 fasterq-dump.2.9.6 sys: connection not found while validating within network system module - Failed to Make Connection in KClientHttpOpen to 'sra-download-internal.ncbi.nlm.nih.gov:443' 2019-06-02T07:55:21 fasterq-dump.2.9.6 err: connection not found while validating within network system module - error with https open 'https://sra-download-internal.ncbi.nlm.nih.gov/traces/sra8/SRR/000748/SRR766210' 2019-06-02T07:55:31 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_tbl().VDBManagerOpenTableRead( 'SRR766210' ) -> RC(rcDB,rcMgr,rcOpening,rcTable,rcIncorrect) 2019-06-02T07:55:31 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcDB,rcMgr,rcOpening,rcTable,rcIncorrect) spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 1,996,620 reads read : 3,993,240 reads written : 3,993,240 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 2019-06-02T08:41:08 fasterq-dump.2.9.6 sys: connection not found while validating within network system module - Failed to Make Connection in KClientHttpOpen to 'sra-download-internal.ncbi.nlm.nih.gov:443' 2019-06-02T08:41:08 fasterq-dump.2.9.6 err: connection not found while validating within network system module - error with https open 'https://sra-download-internal.ncbi.nlm.nih.gov/traces/sra8/SRR/000748/SRR766225' 2019-06-02T08:41:17 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_tbl().VDBManagerOpenTableRead( 'SRR766225' ) -> RC(rcDB,rcMgr,rcOpening,rcTable,rcIncorrect) 2019-06-02T08:41:17 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcDB,rcMgr,rcOpening,rcTable,rcIncorrect) spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 rm: cannot remove ‘fastqDump_tmp*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:01 Multiseed full-index search: 01:23:53 109996620 reads; of these: 109996620 (100.00%) were paired; of these: 29828841 (27.12%) aligned concordantly 0 times 68013751 (61.83%) aligned concordantly exactly 1 time 12154028 (11.05%) aligned concordantly >1 times ---- 29828841 pairs aligned concordantly 0 times; of these: 5742117 (19.25%) aligned discordantly 1 time ---- 24086724 pairs aligned 0 times concordantly or discordantly; of these: 48173448 mates make up the pairs; of these: 42938322 (89.13%) aligned 0 times 2952407 (6.13%) aligned exactly 1 time 2282719 (4.74%) aligned >1 times 80.48% overall alignment rate Time searching: 01:23:54 Overall time: 01:23:54 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 44 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 73067679 / 85838978 = 0.8512 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 02 Jun 2019 19:47:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 19:47:11: #1 read tag files... INFO @ Sun, 02 Jun 2019 19:47:11: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 19:47:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 19:47:11: #1 read tag files... INFO @ Sun, 02 Jun 2019 19:47:11: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 19:47:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 19:47:11: #1 read tag files... INFO @ Sun, 02 Jun 2019 19:47:11: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 19:47:18: 1000000 INFO @ Sun, 02 Jun 2019 19:47:19: 1000000 INFO @ Sun, 02 Jun 2019 19:47:20: 1000000 INFO @ Sun, 02 Jun 2019 19:47:23: 2000000 INFO @ Sun, 02 Jun 2019 19:47:27: 2000000 INFO @ Sun, 02 Jun 2019 19:47:28: 2000000 INFO @ Sun, 02 Jun 2019 19:47:29: 3000000 INFO @ Sun, 02 Jun 2019 19:47:34: 3000000 INFO @ Sun, 02 Jun 2019 19:47:35: 4000000 INFO @ Sun, 02 Jun 2019 19:47:36: 3000000 INFO @ Sun, 02 Jun 2019 19:47:41: 5000000 INFO @ Sun, 02 Jun 2019 19:47:42: 4000000 INFO @ Sun, 02 Jun 2019 19:47:44: 4000000 INFO @ Sun, 02 Jun 2019 19:47:48: 6000000 INFO @ Sun, 02 Jun 2019 19:47:50: 5000000 INFO @ Sun, 02 Jun 2019 19:47:52: 5000000 INFO @ Sun, 02 Jun 2019 19:47:54: 7000000 INFO @ Sun, 02 Jun 2019 19:47:57: 6000000 INFO @ Sun, 02 Jun 2019 19:48:00: 6000000 INFO @ Sun, 02 Jun 2019 19:48:00: 8000000 INFO @ Sun, 02 Jun 2019 19:48:05: 7000000 INFO @ Sun, 02 Jun 2019 19:48:06: 9000000 INFO @ Sun, 02 Jun 2019 19:48:07: 7000000 INFO @ Sun, 02 Jun 2019 19:48:12: 10000000 INFO @ Sun, 02 Jun 2019 19:48:12: 8000000 INFO @ Sun, 02 Jun 2019 19:48:15: 8000000 INFO @ Sun, 02 Jun 2019 19:48:17: 11000000 INFO @ Sun, 02 Jun 2019 19:48:19: 9000000 INFO @ Sun, 02 Jun 2019 19:48:22: 9000000 INFO @ Sun, 02 Jun 2019 19:48:23: 12000000 INFO @ Sun, 02 Jun 2019 19:48:27: 10000000 INFO @ Sun, 02 Jun 2019 19:48:29: 13000000 INFO @ Sun, 02 Jun 2019 19:48:30: 10000000 INFO @ Sun, 02 Jun 2019 19:48:34: 11000000 INFO @ Sun, 02 Jun 2019 19:48:35: 14000000 INFO @ Sun, 02 Jun 2019 19:48:37: 11000000 INFO @ Sun, 02 Jun 2019 19:48:40: 15000000 INFO @ Sun, 02 Jun 2019 19:48:41: 12000000 INFO @ Sun, 02 Jun 2019 19:48:45: 12000000 INFO @ Sun, 02 Jun 2019 19:48:46: 16000000 INFO @ Sun, 02 Jun 2019 19:48:48: 13000000 INFO @ Sun, 02 Jun 2019 19:48:52: 17000000 INFO @ Sun, 02 Jun 2019 19:48:52: 13000000 INFO @ Sun, 02 Jun 2019 19:48:55: 14000000 INFO @ Sun, 02 Jun 2019 19:48:57: 18000000 INFO @ Sun, 02 Jun 2019 19:48:59: 14000000 INFO @ Sun, 02 Jun 2019 19:49:01: 15000000 INFO @ Sun, 02 Jun 2019 19:49:03: 19000000 INFO @ Sun, 02 Jun 2019 19:49:07: 15000000 INFO @ Sun, 02 Jun 2019 19:49:08: 16000000 INFO @ Sun, 02 Jun 2019 19:49:10: 20000000 INFO @ Sun, 02 Jun 2019 19:49:14: 16000000 INFO @ Sun, 02 Jun 2019 19:49:15: 17000000 INFO @ Sun, 02 Jun 2019 19:49:18: 21000000 INFO @ Sun, 02 Jun 2019 19:49:22: 17000000 INFO @ Sun, 02 Jun 2019 19:49:22: 18000000 INFO @ Sun, 02 Jun 2019 19:49:26: 22000000 INFO @ Sun, 02 Jun 2019 19:49:29: 18000000 INFO @ Sun, 02 Jun 2019 19:49:29: 19000000 INFO @ Sun, 02 Jun 2019 19:49:34: 23000000 INFO @ Sun, 02 Jun 2019 19:49:36: 20000000 INFO @ Sun, 02 Jun 2019 19:49:36: 19000000 INFO @ Sun, 02 Jun 2019 19:49:41: 24000000 INFO @ Sun, 02 Jun 2019 19:49:43: 21000000 INFO @ Sun, 02 Jun 2019 19:49:44: 20000000 INFO @ Sun, 02 Jun 2019 19:49:48: 25000000 INFO @ Sun, 02 Jun 2019 19:49:50: 22000000 INFO @ Sun, 02 Jun 2019 19:49:51: 21000000 INFO @ Sun, 02 Jun 2019 19:49:56: 26000000 INFO @ Sun, 02 Jun 2019 19:49:58: 23000000 INFO @ Sun, 02 Jun 2019 19:49:59: 22000000 INFO @ Sun, 02 Jun 2019 19:50:04: 27000000 INFO @ Sun, 02 Jun 2019 19:50:05: 24000000 INFO @ Sun, 02 Jun 2019 19:50:06: 23000000 INFO @ Sun, 02 Jun 2019 19:50:11: 28000000 INFO @ Sun, 02 Jun 2019 19:50:12: 25000000 INFO @ Sun, 02 Jun 2019 19:50:14: 24000000 INFO @ Sun, 02 Jun 2019 19:50:18: 29000000 INFO @ Sun, 02 Jun 2019 19:50:19: 26000000 INFO @ Sun, 02 Jun 2019 19:50:21: 25000000 INFO @ Sun, 02 Jun 2019 19:50:26: 27000000 INFO @ Sun, 02 Jun 2019 19:50:26: 30000000 INFO @ Sun, 02 Jun 2019 19:50:29: 26000000 INFO @ Sun, 02 Jun 2019 19:50:32: 28000000 INFO @ Sun, 02 Jun 2019 19:50:33: #1 tag size is determined as 24 bps INFO @ Sun, 02 Jun 2019 19:50:33: #1 tag size = 24 INFO @ Sun, 02 Jun 2019 19:50:33: #1 total tags in treatment: 11114176 INFO @ Sun, 02 Jun 2019 19:50:33: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 19:50:33: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 19:50:33: #1 tags after filtering in treatment: 7928270 INFO @ Sun, 02 Jun 2019 19:50:33: #1 Redundant rate of treatment: 0.29 INFO @ Sun, 02 Jun 2019 19:50:33: #1 finished! INFO @ Sun, 02 Jun 2019 19:50:33: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 19:50:33: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 19:50:34: #2 number of paired peaks: 1395 INFO @ Sun, 02 Jun 2019 19:50:34: start model_add_line... INFO @ Sun, 02 Jun 2019 19:50:34: start X-correlation... INFO @ Sun, 02 Jun 2019 19:50:34: end of X-cor INFO @ Sun, 02 Jun 2019 19:50:34: #2 finished! INFO @ Sun, 02 Jun 2019 19:50:34: #2 predicted fragment length is 79 bps INFO @ Sun, 02 Jun 2019 19:50:34: #2 alternative fragment length(s) may be 2,79 bps INFO @ Sun, 02 Jun 2019 19:50:34: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.10_model.r INFO @ Sun, 02 Jun 2019 19:50:34: #3 Call peaks... INFO @ Sun, 02 Jun 2019 19:50:34: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 02 Jun 2019 19:50:36: 27000000 INFO @ Sun, 02 Jun 2019 19:50:39: 29000000 INFO @ Sun, 02 Jun 2019 19:50:43: 28000000 INFO @ Sun, 02 Jun 2019 19:50:45: 30000000 INFO @ Sun, 02 Jun 2019 19:50:50: 29000000 INFO @ Sun, 02 Jun 2019 19:50:51: #1 tag size is determined as 24 bps INFO @ Sun, 02 Jun 2019 19:50:51: #1 tag size = 24 INFO @ Sun, 02 Jun 2019 19:50:51: #1 total tags in treatment: 11114176 INFO @ Sun, 02 Jun 2019 19:50:51: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 19:50:51: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 19:50:52: #1 tags after filtering in treatment: 7928270 INFO @ Sun, 02 Jun 2019 19:50:52: #1 Redundant rate of treatment: 0.29 INFO @ Sun, 02 Jun 2019 19:50:52: #1 finished! INFO @ Sun, 02 Jun 2019 19:50:52: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 19:50:52: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 19:50:53: #2 number of paired peaks: 1395 INFO @ Sun, 02 Jun 2019 19:50:53: start model_add_line... INFO @ Sun, 02 Jun 2019 19:50:53: start X-correlation... INFO @ Sun, 02 Jun 2019 19:50:53: end of X-cor INFO @ Sun, 02 Jun 2019 19:50:53: #2 finished! INFO @ Sun, 02 Jun 2019 19:50:53: #2 predicted fragment length is 79 bps INFO @ Sun, 02 Jun 2019 19:50:53: #2 alternative fragment length(s) may be 2,79 bps INFO @ Sun, 02 Jun 2019 19:50:53: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.20_model.r INFO @ Sun, 02 Jun 2019 19:50:53: #3 Call peaks... INFO @ Sun, 02 Jun 2019 19:50:53: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 02 Jun 2019 19:50:57: 30000000 INFO @ Sun, 02 Jun 2019 19:50:57: #3 Call peaks for each chromosome... INFO @ Sun, 02 Jun 2019 19:51:04: #1 tag size is determined as 24 bps INFO @ Sun, 02 Jun 2019 19:51:04: #1 tag size = 24 INFO @ Sun, 02 Jun 2019 19:51:04: #1 total tags in treatment: 11114176 INFO @ Sun, 02 Jun 2019 19:51:04: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 19:51:04: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 19:51:04: #1 tags after filtering in treatment: 7928270 INFO @ Sun, 02 Jun 2019 19:51:04: #1 Redundant rate of treatment: 0.29 INFO @ Sun, 02 Jun 2019 19:51:04: #1 finished! INFO @ Sun, 02 Jun 2019 19:51:04: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 19:51:04: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 19:51:05: #2 number of paired peaks: 1395 INFO @ Sun, 02 Jun 2019 19:51:05: start model_add_line... INFO @ Sun, 02 Jun 2019 19:51:05: start X-correlation... INFO @ Sun, 02 Jun 2019 19:51:05: end of X-cor INFO @ Sun, 02 Jun 2019 19:51:05: #2 finished! INFO @ Sun, 02 Jun 2019 19:51:05: #2 predicted fragment length is 79 bps INFO @ Sun, 02 Jun 2019 19:51:05: #2 alternative fragment length(s) may be 2,79 bps INFO @ Sun, 02 Jun 2019 19:51:05: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.05_model.r INFO @ Sun, 02 Jun 2019 19:51:05: #3 Call peaks... INFO @ Sun, 02 Jun 2019 19:51:05: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 02 Jun 2019 19:51:08: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.10_peaks.xls INFO @ Sun, 02 Jun 2019 19:51:08: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.10_peaks.narrowPeak INFO @ Sun, 02 Jun 2019 19:51:08: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.10_summits.bed INFO @ Sun, 02 Jun 2019 19:51:08: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (706 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Sun, 02 Jun 2019 19:51:17: #3 Call peaks for each chromosome... INFO @ Sun, 02 Jun 2019 19:51:28: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.20_peaks.xls INFO @ Sun, 02 Jun 2019 19:51:28: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.20_peaks.narrowPeak INFO @ Sun, 02 Jun 2019 19:51:28: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.20_summits.bed INFO @ Sun, 02 Jun 2019 19:51:28: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (359 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Sun, 02 Jun 2019 19:51:28: #3 Call peaks for each chromosome... INFO @ Sun, 02 Jun 2019 19:51:39: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.05_peaks.xls INFO @ Sun, 02 Jun 2019 19:51:39: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.05_peaks.narrowPeak INFO @ Sun, 02 Jun 2019 19:51:39: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX246029/SRX246029.05_summits.bed INFO @ Sun, 02 Jun 2019 19:51:39: Done! pass1 - making usageList (6 chroms): 2 millis pass2 - checking and writing primary data (1674 records, 4 fields): 6 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。