Job ID = 1291771 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 3,841,810 reads read : 7,683,620 reads written : 7,683,620 2019-06-02T07:40:56 fasterq-dump.2.9.6 sys: connection not found while validating within network system module - Failed to Make Connection in KClientHttpOpen to 'sra-download-internal.ncbi.nlm.nih.gov:443' 2019-06-02T07:40:56 fasterq-dump.2.9.6 err: connection not found while validating within network system module - error with https open 'https://sra-download-internal.ncbi.nlm.nih.gov/traces/sra8/SRR/000748/SRR766114' 2019-06-02T07:41:05 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_tbl().VDBManagerOpenTableRead( 'SRR766114' ) -> RC(rcDB,rcMgr,rcOpening,rcTable,rcIncorrect) 2019-06-02T07:41:05 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcDB,rcMgr,rcOpening,rcTable,rcIncorrect) spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 2019-06-02T07:45:52 fasterq-dump.2.9.6 sys: connection not found while validating within network system module - Failed to Make Connection in KClientHttpOpen to 'sra-download-internal.ncbi.nlm.nih.gov:443' 2019-06-02T07:45:52 fasterq-dump.2.9.6 err: connection not found while validating within network system module - error with https open 'https://sra-download-internal.ncbi.nlm.nih.gov/traces/sra8/SRR/000748/SRR766115' 2019-06-02T07:46:02 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_tbl().VDBManagerOpenTableRead( 'SRR766115' ) -> RC(rcDB,rcMgr,rcOpening,rcTable,rcIncorrect) 2019-06-02T07:46:02 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcDB,rcMgr,rcOpening,rcTable,rcIncorrect) spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 spots read : 4,000,000 reads read : 8,000,000 reads written : 8,000,000 rm: cannot remove ‘fastqDump_tmp*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:44:09 55841810 reads; of these: 55841810 (100.00%) were paired; of these: 11622929 (20.81%) aligned concordantly 0 times 37933489 (67.93%) aligned concordantly exactly 1 time 6285392 (11.26%) aligned concordantly >1 times ---- 11622929 pairs aligned concordantly 0 times; of these: 3734730 (32.13%) aligned discordantly 1 time ---- 7888199 pairs aligned 0 times concordantly or discordantly; of these: 15776398 mates make up the pairs; of these: 12853163 (81.47%) aligned 0 times 1510452 (9.57%) aligned exactly 1 time 1412783 (8.96%) aligned >1 times 88.49% overall alignment rate Time searching: 00:44:10 Overall time: 00:44:10 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 2804116 / 47886707 = 0.0586 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 02 Jun 2019 18:14:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 18:14:16: #1 read tag files... INFO @ Sun, 02 Jun 2019 18:14:16: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 18:14:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 18:14:16: #1 read tag files... INFO @ Sun, 02 Jun 2019 18:14:16: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 18:14:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 18:14:16: #1 read tag files... INFO @ Sun, 02 Jun 2019 18:14:16: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 18:14:22: 1000000 INFO @ Sun, 02 Jun 2019 18:14:23: 1000000 INFO @ Sun, 02 Jun 2019 18:14:24: 1000000 INFO @ Sun, 02 Jun 2019 18:14:28: 2000000 INFO @ Sun, 02 Jun 2019 18:14:29: 2000000 INFO @ Sun, 02 Jun 2019 18:14:31: 2000000 INFO @ Sun, 02 Jun 2019 18:14:34: 3000000 INFO @ Sun, 02 Jun 2019 18:14:36: 3000000 INFO @ Sun, 02 Jun 2019 18:14:38: 3000000 INFO @ Sun, 02 Jun 2019 18:14:40: 4000000 INFO @ Sun, 02 Jun 2019 18:14:42: 4000000 INFO @ Sun, 02 Jun 2019 18:14:46: 5000000 INFO @ Sun, 02 Jun 2019 18:14:46: 4000000 INFO @ Sun, 02 Jun 2019 18:14:48: 5000000 INFO @ Sun, 02 Jun 2019 18:14:51: 6000000 INFO @ Sun, 02 Jun 2019 18:14:53: 5000000 INFO @ Sun, 02 Jun 2019 18:14:55: 6000000 INFO @ Sun, 02 Jun 2019 18:14:57: 7000000 INFO @ Sun, 02 Jun 2019 18:15:01: 6000000 INFO @ Sun, 02 Jun 2019 18:15:01: 7000000 INFO @ Sun, 02 Jun 2019 18:15:03: 8000000 INFO @ Sun, 02 Jun 2019 18:15:08: 8000000 INFO @ Sun, 02 Jun 2019 18:15:08: 7000000 INFO @ Sun, 02 Jun 2019 18:15:09: 9000000 INFO @ Sun, 02 Jun 2019 18:15:14: 9000000 INFO @ Sun, 02 Jun 2019 18:15:15: 10000000 INFO @ Sun, 02 Jun 2019 18:15:15: 8000000 INFO @ Sun, 02 Jun 2019 18:15:20: 10000000 INFO @ Sun, 02 Jun 2019 18:15:20: 11000000 INFO @ Sun, 02 Jun 2019 18:15:23: 9000000 INFO @ Sun, 02 Jun 2019 18:15:26: 12000000 INFO @ Sun, 02 Jun 2019 18:15:26: 11000000 INFO @ Sun, 02 Jun 2019 18:15:30: 10000000 INFO @ Sun, 02 Jun 2019 18:15:32: 13000000 INFO @ Sun, 02 Jun 2019 18:15:33: 12000000 INFO @ Sun, 02 Jun 2019 18:15:37: 11000000 INFO @ Sun, 02 Jun 2019 18:15:38: 14000000 INFO @ Sun, 02 Jun 2019 18:15:39: 13000000 INFO @ Sun, 02 Jun 2019 18:15:44: 15000000 INFO @ Sun, 02 Jun 2019 18:15:45: 12000000 INFO @ Sun, 02 Jun 2019 18:15:45: 14000000 INFO @ Sun, 02 Jun 2019 18:15:50: 16000000 INFO @ Sun, 02 Jun 2019 18:15:52: 15000000 INFO @ Sun, 02 Jun 2019 18:15:52: 13000000 INFO @ Sun, 02 Jun 2019 18:15:56: 17000000 INFO @ Sun, 02 Jun 2019 18:15:58: 16000000 INFO @ Sun, 02 Jun 2019 18:16:00: 14000000 INFO @ Sun, 02 Jun 2019 18:16:02: 18000000 INFO @ Sun, 02 Jun 2019 18:16:05: 17000000 INFO @ Sun, 02 Jun 2019 18:16:07: 15000000 INFO @ Sun, 02 Jun 2019 18:16:08: 19000000 INFO @ Sun, 02 Jun 2019 18:16:11: 18000000 INFO @ Sun, 02 Jun 2019 18:16:14: 20000000 INFO @ Sun, 02 Jun 2019 18:16:14: 16000000 INFO @ Sun, 02 Jun 2019 18:16:18: 19000000 INFO @ Sun, 02 Jun 2019 18:16:19: 21000000 INFO @ Sun, 02 Jun 2019 18:16:22: 17000000 INFO @ Sun, 02 Jun 2019 18:16:24: 20000000 INFO @ Sun, 02 Jun 2019 18:16:25: 22000000 INFO @ Sun, 02 Jun 2019 18:16:29: 18000000 INFO @ Sun, 02 Jun 2019 18:16:30: 21000000 INFO @ Sun, 02 Jun 2019 18:16:31: 23000000 INFO @ Sun, 02 Jun 2019 18:16:36: 19000000 INFO @ Sun, 02 Jun 2019 18:16:37: 22000000 INFO @ Sun, 02 Jun 2019 18:16:37: 24000000 INFO @ Sun, 02 Jun 2019 18:16:42: 25000000 INFO @ Sun, 02 Jun 2019 18:16:43: 23000000 INFO @ Sun, 02 Jun 2019 18:16:44: 20000000 INFO @ Sun, 02 Jun 2019 18:16:48: 26000000 INFO @ Sun, 02 Jun 2019 18:16:49: 24000000 INFO @ Sun, 02 Jun 2019 18:16:51: 21000000 INFO @ Sun, 02 Jun 2019 18:16:55: 27000000 INFO @ Sun, 02 Jun 2019 18:16:56: 25000000 INFO @ Sun, 02 Jun 2019 18:16:59: 22000000 INFO @ Sun, 02 Jun 2019 18:17:01: 28000000 INFO @ Sun, 02 Jun 2019 18:17:02: 26000000 INFO @ Sun, 02 Jun 2019 18:17:06: 23000000 INFO @ Sun, 02 Jun 2019 18:17:06: 29000000 INFO @ Sun, 02 Jun 2019 18:17:09: 27000000 INFO @ Sun, 02 Jun 2019 18:17:12: 30000000 INFO @ Sun, 02 Jun 2019 18:17:13: 24000000 INFO @ Sun, 02 Jun 2019 18:17:15: 28000000 INFO @ Sun, 02 Jun 2019 18:17:18: 31000000 INFO @ Sun, 02 Jun 2019 18:17:21: 25000000 INFO @ Sun, 02 Jun 2019 18:17:21: 29000000 INFO @ Sun, 02 Jun 2019 18:17:24: 32000000 INFO @ Sun, 02 Jun 2019 18:17:28: 30000000 INFO @ Sun, 02 Jun 2019 18:17:28: 26000000 INFO @ Sun, 02 Jun 2019 18:17:29: 33000000 INFO @ Sun, 02 Jun 2019 18:17:34: 31000000 INFO @ Sun, 02 Jun 2019 18:17:35: 34000000 INFO @ Sun, 02 Jun 2019 18:17:35: 27000000 INFO @ Sun, 02 Jun 2019 18:17:40: 32000000 INFO @ Sun, 02 Jun 2019 18:17:41: 35000000 INFO @ Sun, 02 Jun 2019 18:17:43: 28000000 INFO @ Sun, 02 Jun 2019 18:17:47: 33000000 INFO @ Sun, 02 Jun 2019 18:17:47: 36000000 INFO @ Sun, 02 Jun 2019 18:17:50: 29000000 INFO @ Sun, 02 Jun 2019 18:17:53: 37000000 INFO @ Sun, 02 Jun 2019 18:17:54: 34000000 INFO @ Sun, 02 Jun 2019 18:17:58: 30000000 INFO @ Sun, 02 Jun 2019 18:17:59: 38000000 INFO @ Sun, 02 Jun 2019 18:18:00: 35000000 INFO @ Sun, 02 Jun 2019 18:18:05: 31000000 INFO @ Sun, 02 Jun 2019 18:18:06: 39000000 INFO @ Sun, 02 Jun 2019 18:18:07: 36000000 INFO @ Sun, 02 Jun 2019 18:18:12: 40000000 INFO @ Sun, 02 Jun 2019 18:18:12: 32000000 INFO @ Sun, 02 Jun 2019 18:18:13: 37000000 INFO @ Sun, 02 Jun 2019 18:18:18: 41000000 INFO @ Sun, 02 Jun 2019 18:18:19: 38000000 INFO @ Sun, 02 Jun 2019 18:18:20: 33000000 INFO @ Sun, 02 Jun 2019 18:18:24: 42000000 INFO @ Sun, 02 Jun 2019 18:18:26: 39000000 INFO @ Sun, 02 Jun 2019 18:18:27: 34000000 INFO @ Sun, 02 Jun 2019 18:18:30: 43000000 INFO @ Sun, 02 Jun 2019 18:18:32: 40000000 INFO @ Sun, 02 Jun 2019 18:18:35: 35000000 INFO @ Sun, 02 Jun 2019 18:18:36: 44000000 INFO @ Sun, 02 Jun 2019 18:18:38: 41000000 INFO @ Sun, 02 Jun 2019 18:18:42: 45000000 INFO @ Sun, 02 Jun 2019 18:18:42: 36000000 INFO @ Sun, 02 Jun 2019 18:18:45: 42000000 INFO @ Sun, 02 Jun 2019 18:18:50: 46000000 INFO @ Sun, 02 Jun 2019 18:18:51: 37000000 INFO @ Sun, 02 Jun 2019 18:18:52: 43000000 INFO @ Sun, 02 Jun 2019 18:18:56: 47000000 INFO @ Sun, 02 Jun 2019 18:18:58: 38000000 INFO @ Sun, 02 Jun 2019 18:18:58: 44000000 INFO @ Sun, 02 Jun 2019 18:19:02: 48000000 INFO @ Sun, 02 Jun 2019 18:19:05: 45000000 INFO @ Sun, 02 Jun 2019 18:19:05: 39000000 INFO @ Sun, 02 Jun 2019 18:19:08: 49000000 INFO @ Sun, 02 Jun 2019 18:19:11: 46000000 INFO @ Sun, 02 Jun 2019 18:19:13: 40000000 INFO @ Sun, 02 Jun 2019 18:19:14: 50000000 INFO @ Sun, 02 Jun 2019 18:19:17: 47000000 INFO @ Sun, 02 Jun 2019 18:19:20: 41000000 INFO @ Sun, 02 Jun 2019 18:19:21: 51000000 INFO @ Sun, 02 Jun 2019 18:19:23: 48000000 INFO @ Sun, 02 Jun 2019 18:19:26: 52000000 INFO @ Sun, 02 Jun 2019 18:19:27: 42000000 INFO @ Sun, 02 Jun 2019 18:19:30: 49000000 INFO @ Sun, 02 Jun 2019 18:19:32: 53000000 INFO @ Sun, 02 Jun 2019 18:19:35: 43000000 INFO @ Sun, 02 Jun 2019 18:19:36: 50000000 INFO @ Sun, 02 Jun 2019 18:19:38: 54000000 INFO @ Sun, 02 Jun 2019 18:19:42: 44000000 INFO @ Sun, 02 Jun 2019 18:19:43: 51000000 INFO @ Sun, 02 Jun 2019 18:19:46: 55000000 INFO @ Sun, 02 Jun 2019 18:19:49: 52000000 INFO @ Sun, 02 Jun 2019 18:19:50: 45000000 INFO @ Sun, 02 Jun 2019 18:19:53: 56000000 INFO @ Sun, 02 Jun 2019 18:19:56: 53000000 INFO @ Sun, 02 Jun 2019 18:19:57: 46000000 INFO @ Sun, 02 Jun 2019 18:19:59: 57000000 INFO @ Sun, 02 Jun 2019 18:20:02: 54000000 INFO @ Sun, 02 Jun 2019 18:20:04: 47000000 INFO @ Sun, 02 Jun 2019 18:20:05: 58000000 INFO @ Sun, 02 Jun 2019 18:20:08: 55000000 INFO @ Sun, 02 Jun 2019 18:20:11: 59000000 INFO @ Sun, 02 Jun 2019 18:20:12: 48000000 INFO @ Sun, 02 Jun 2019 18:20:15: 56000000 INFO @ Sun, 02 Jun 2019 18:20:17: 60000000 INFO @ Sun, 02 Jun 2019 18:20:19: 49000000 INFO @ Sun, 02 Jun 2019 18:20:21: 57000000 INFO @ Sun, 02 Jun 2019 18:20:23: 61000000 INFO @ Sun, 02 Jun 2019 18:20:26: 50000000 INFO @ Sun, 02 Jun 2019 18:20:27: 58000000 INFO @ Sun, 02 Jun 2019 18:20:28: 62000000 INFO @ Sun, 02 Jun 2019 18:20:33: 59000000 INFO @ Sun, 02 Jun 2019 18:20:34: 51000000 INFO @ Sun, 02 Jun 2019 18:20:34: 63000000 INFO @ Sun, 02 Jun 2019 18:20:40: 60000000 INFO @ Sun, 02 Jun 2019 18:20:41: 64000000 INFO @ Sun, 02 Jun 2019 18:20:42: 52000000 INFO @ Sun, 02 Jun 2019 18:20:47: 61000000 INFO @ Sun, 02 Jun 2019 18:20:49: 65000000 INFO @ Sun, 02 Jun 2019 18:20:49: 53000000 INFO @ Sun, 02 Jun 2019 18:20:53: 62000000 INFO @ Sun, 02 Jun 2019 18:20:55: 66000000 INFO @ Sun, 02 Jun 2019 18:20:56: 54000000 INFO @ Sun, 02 Jun 2019 18:21:00: 63000000 INFO @ Sun, 02 Jun 2019 18:21:01: 67000000 INFO @ Sun, 02 Jun 2019 18:21:04: 55000000 INFO @ Sun, 02 Jun 2019 18:21:06: 64000000 INFO @ Sun, 02 Jun 2019 18:21:06: 68000000 INFO @ Sun, 02 Jun 2019 18:21:11: 56000000 INFO @ Sun, 02 Jun 2019 18:21:12: 65000000 INFO @ Sun, 02 Jun 2019 18:21:12: 69000000 INFO @ Sun, 02 Jun 2019 18:21:18: 66000000 INFO @ Sun, 02 Jun 2019 18:21:18: 57000000 INFO @ Sun, 02 Jun 2019 18:21:19: 70000000 INFO @ Sun, 02 Jun 2019 18:21:24: 71000000 INFO @ Sun, 02 Jun 2019 18:21:25: 67000000 INFO @ Sun, 02 Jun 2019 18:21:26: 58000000 INFO @ Sun, 02 Jun 2019 18:21:30: 72000000 INFO @ Sun, 02 Jun 2019 18:21:31: 68000000 INFO @ Sun, 02 Jun 2019 18:21:33: 59000000 INFO @ Sun, 02 Jun 2019 18:21:36: 73000000 INFO @ Sun, 02 Jun 2019 18:21:37: 69000000 INFO @ Sun, 02 Jun 2019 18:21:41: 60000000 INFO @ Sun, 02 Jun 2019 18:21:44: 74000000 INFO @ Sun, 02 Jun 2019 18:21:44: 70000000 INFO @ Sun, 02 Jun 2019 18:21:48: 61000000 INFO @ Sun, 02 Jun 2019 18:21:51: 71000000 INFO @ Sun, 02 Jun 2019 18:21:51: 75000000 INFO @ Sun, 02 Jun 2019 18:21:55: 62000000 INFO @ Sun, 02 Jun 2019 18:21:57: 72000000 INFO @ Sun, 02 Jun 2019 18:21:57: 76000000 INFO @ Sun, 02 Jun 2019 18:22:03: 63000000 INFO @ Sun, 02 Jun 2019 18:22:03: 77000000 INFO @ Sun, 02 Jun 2019 18:22:03: 73000000 INFO @ Sun, 02 Jun 2019 18:22:09: 78000000 INFO @ Sun, 02 Jun 2019 18:22:10: 74000000 INFO @ Sun, 02 Jun 2019 18:22:10: 64000000 INFO @ Sun, 02 Jun 2019 18:22:15: 79000000 INFO @ Sun, 02 Jun 2019 18:22:16: 75000000 INFO @ Sun, 02 Jun 2019 18:22:17: 65000000 INFO @ Sun, 02 Jun 2019 18:22:20: 80000000 INFO @ Sun, 02 Jun 2019 18:22:22: 76000000 INFO @ Sun, 02 Jun 2019 18:22:24: 66000000 INFO @ Sun, 02 Jun 2019 18:22:26: 81000000 INFO @ Sun, 02 Jun 2019 18:22:28: 77000000 INFO @ Sun, 02 Jun 2019 18:22:31: 82000000 INFO @ Sun, 02 Jun 2019 18:22:32: 67000000 INFO @ Sun, 02 Jun 2019 18:22:34: 78000000 INFO @ Sun, 02 Jun 2019 18:22:38: 83000000 INFO @ Sun, 02 Jun 2019 18:22:39: 68000000 INFO @ Sun, 02 Jun 2019 18:22:41: 79000000 INFO @ Sun, 02 Jun 2019 18:22:46: 84000000 INFO @ Sun, 02 Jun 2019 18:22:47: 69000000 INFO @ Sun, 02 Jun 2019 18:22:47: 80000000 INFO @ Sun, 02 Jun 2019 18:22:51: 85000000 INFO @ Sun, 02 Jun 2019 18:22:53: 81000000 INFO @ Sun, 02 Jun 2019 18:22:54: 70000000 INFO @ Sun, 02 Jun 2019 18:22:57: 86000000 INFO @ Sun, 02 Jun 2019 18:22:59: 82000000 INFO @ Sun, 02 Jun 2019 18:23:01: 71000000 INFO @ Sun, 02 Jun 2019 18:23:03: 87000000 INFO @ Sun, 02 Jun 2019 18:23:05: 83000000 INFO @ Sun, 02 Jun 2019 18:23:09: 72000000 INFO @ Sun, 02 Jun 2019 18:23:09: 88000000 INFO @ Sun, 02 Jun 2019 18:23:11: 84000000 INFO @ Sun, 02 Jun 2019 18:23:15: 89000000 INFO @ Sun, 02 Jun 2019 18:23:16: 73000000 INFO @ Sun, 02 Jun 2019 18:23:17: 85000000 INFO @ Sun, 02 Jun 2019 18:23:20: 90000000 INFO @ Sun, 02 Jun 2019 18:23:23: 86000000 INFO @ Sun, 02 Jun 2019 18:23:23: 74000000 INFO @ Sun, 02 Jun 2019 18:23:26: 91000000 INFO @ Sun, 02 Jun 2019 18:23:29: 87000000 INFO @ Sun, 02 Jun 2019 18:23:31: 75000000 INFO @ Sun, 02 Jun 2019 18:23:32: 92000000 INFO @ Sun, 02 Jun 2019 18:23:35: 88000000 INFO @ Sun, 02 Jun 2019 18:23:38: 93000000 INFO @ Sun, 02 Jun 2019 18:23:38: 76000000 INFO @ Sun, 02 Jun 2019 18:23:41: #1 tag size is determined as 25 bps INFO @ Sun, 02 Jun 2019 18:23:41: #1 tag size = 25 INFO @ Sun, 02 Jun 2019 18:23:41: #1 total tags in treatment: 41488824 INFO @ Sun, 02 Jun 2019 18:23:41: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 18:23:41: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 18:23:42: 89000000 INFO @ Sun, 02 Jun 2019 18:23:42: #1 tags after filtering in treatment: 28549846 INFO @ Sun, 02 Jun 2019 18:23:42: #1 Redundant rate of treatment: 0.31 INFO @ Sun, 02 Jun 2019 18:23:42: #1 finished! INFO @ Sun, 02 Jun 2019 18:23:42: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 18:23:42: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 18:23:45: #2 number of paired peaks: 25 WARNING @ Sun, 02 Jun 2019 18:23:45: Too few paired peaks (25) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 02 Jun 2019 18:23:45: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sun, 02 Jun 2019 18:23:45: 77000000 INFO @ Sun, 02 Jun 2019 18:23:47: 90000000 INFO @ Sun, 02 Jun 2019 18:23:52: 78000000 INFO @ Sun, 02 Jun 2019 18:23:53: 91000000 INFO @ Sun, 02 Jun 2019 18:23:59: 79000000 INFO @ Sun, 02 Jun 2019 18:23:59: 92000000 INFO @ Sun, 02 Jun 2019 18:24:05: 93000000 INFO @ Sun, 02 Jun 2019 18:24:06: 80000000 INFO @ Sun, 02 Jun 2019 18:24:07: #1 tag size is determined as 25 bps INFO @ Sun, 02 Jun 2019 18:24:07: #1 tag size = 25 INFO @ Sun, 02 Jun 2019 18:24:07: #1 total tags in treatment: 41488824 INFO @ Sun, 02 Jun 2019 18:24:07: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 18:24:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 18:24:09: #1 tags after filtering in treatment: 28549846 INFO @ Sun, 02 Jun 2019 18:24:09: #1 Redundant rate of treatment: 0.31 INFO @ Sun, 02 Jun 2019 18:24:09: #1 finished! INFO @ Sun, 02 Jun 2019 18:24:09: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 18:24:09: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 18:24:12: #2 number of paired peaks: 25 WARNING @ Sun, 02 Jun 2019 18:24:12: Too few paired peaks (25) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 02 Jun 2019 18:24:12: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sun, 02 Jun 2019 18:24:13: 81000000 INFO @ Sun, 02 Jun 2019 18:24:19: 82000000 INFO @ Sun, 02 Jun 2019 18:24:26: 83000000 INFO @ Sun, 02 Jun 2019 18:24:33: 84000000 INFO @ Sun, 02 Jun 2019 18:24:40: 85000000 INFO @ Sun, 02 Jun 2019 18:24:47: 86000000 INFO @ Sun, 02 Jun 2019 18:24:54: 87000000 INFO @ Sun, 02 Jun 2019 18:25:00: 88000000 INFO @ Sun, 02 Jun 2019 18:25:07: 89000000 INFO @ Sun, 02 Jun 2019 18:25:14: 90000000 INFO @ Sun, 02 Jun 2019 18:25:21: 91000000 INFO @ Sun, 02 Jun 2019 18:25:27: 92000000 INFO @ Sun, 02 Jun 2019 18:25:34: 93000000 INFO @ Sun, 02 Jun 2019 18:25:37: #1 tag size is determined as 25 bps INFO @ Sun, 02 Jun 2019 18:25:37: #1 tag size = 25 INFO @ Sun, 02 Jun 2019 18:25:37: #1 total tags in treatment: 41488824 INFO @ Sun, 02 Jun 2019 18:25:37: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 18:25:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 18:25:38: #1 tags after filtering in treatment: 28549846 INFO @ Sun, 02 Jun 2019 18:25:38: #1 Redundant rate of treatment: 0.31 INFO @ Sun, 02 Jun 2019 18:25:38: #1 finished! INFO @ Sun, 02 Jun 2019 18:25:38: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 18:25:38: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 18:25:41: #2 number of paired peaks: 25 WARNING @ Sun, 02 Jun 2019 18:25:41: Too few paired peaks (25) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 02 Jun 2019 18:25:41: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX246025/SRX246025.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。