Job ID = 6497347 SRX = SRX1995024 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-25T22:10:11 prefetch.2.10.7: 1) Downloading 'SRR3993956'... 2020-06-25T22:10:11 prefetch.2.10.7: Downloading via HTTPS... 2020-06-25T22:13:11 prefetch.2.10.7: HTTPS download succeed 2020-06-25T22:13:11 prefetch.2.10.7: 1) 'SRR3993956' was downloaded successfully Read 23670218 spots for SRR3993956/SRR3993956.sra Written 23670218 spots for SRR3993956/SRR3993956.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:22:54 23670218 reads; of these: 23670218 (100.00%) were paired; of these: 1368036 (5.78%) aligned concordantly 0 times 19156159 (80.93%) aligned concordantly exactly 1 time 3146023 (13.29%) aligned concordantly >1 times ---- 1368036 pairs aligned concordantly 0 times; of these: 848335 (62.01%) aligned discordantly 1 time ---- 519701 pairs aligned 0 times concordantly or discordantly; of these: 1039402 mates make up the pairs; of these: 515892 (49.63%) aligned 0 times 294828 (28.37%) aligned exactly 1 time 228682 (22.00%) aligned >1 times 98.91% overall alignment rate Time searching: 00:22:54 Overall time: 00:22:54 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 326661 / 23136659 = 0.0141 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 26 Jun 2020 07:51:26: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 26 Jun 2020 07:51:26: #1 read tag files... INFO @ Fri, 26 Jun 2020 07:51:26: #1 read treatment tags... INFO @ Fri, 26 Jun 2020 07:51:32: 1000000 INFO @ Fri, 26 Jun 2020 07:51:37: 2000000 INFO @ Fri, 26 Jun 2020 07:51:42: 3000000 INFO @ Fri, 26 Jun 2020 07:51:47: 4000000 INFO @ Fri, 26 Jun 2020 07:51:53: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 26 Jun 2020 07:51:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 26 Jun 2020 07:51:56: #1 read tag files... INFO @ Fri, 26 Jun 2020 07:51:56: #1 read treatment tags... INFO @ Fri, 26 Jun 2020 07:51:58: 6000000 INFO @ Fri, 26 Jun 2020 07:52:03: 1000000 INFO @ Fri, 26 Jun 2020 07:52:04: 7000000 INFO @ Fri, 26 Jun 2020 07:52:09: 2000000 INFO @ Fri, 26 Jun 2020 07:52:11: 8000000 INFO @ Fri, 26 Jun 2020 07:52:15: 3000000 INFO @ Fri, 26 Jun 2020 07:52:17: 9000000 INFO @ Fri, 26 Jun 2020 07:52:21: 4000000 INFO @ Fri, 26 Jun 2020 07:52:23: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 26 Jun 2020 07:52:26: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 26 Jun 2020 07:52:26: #1 read tag files... INFO @ Fri, 26 Jun 2020 07:52:26: #1 read treatment tags... INFO @ Fri, 26 Jun 2020 07:52:27: 5000000 INFO @ Fri, 26 Jun 2020 07:52:29: 11000000 INFO @ Fri, 26 Jun 2020 07:52:33: 1000000 INFO @ Fri, 26 Jun 2020 07:52:34: 6000000 INFO @ Fri, 26 Jun 2020 07:52:36: 12000000 INFO @ Fri, 26 Jun 2020 07:52:39: 2000000 INFO @ Fri, 26 Jun 2020 07:52:40: 7000000 INFO @ Fri, 26 Jun 2020 07:52:42: 13000000 INFO @ Fri, 26 Jun 2020 07:52:46: 3000000 INFO @ Fri, 26 Jun 2020 07:52:46: 8000000 INFO @ Fri, 26 Jun 2020 07:52:48: 14000000 INFO @ Fri, 26 Jun 2020 07:52:52: 4000000 INFO @ Fri, 26 Jun 2020 07:52:53: 9000000 INFO @ Fri, 26 Jun 2020 07:52:55: 15000000 INFO @ Fri, 26 Jun 2020 07:52:58: 5000000 INFO @ Fri, 26 Jun 2020 07:52:59: 10000000 INFO @ Fri, 26 Jun 2020 07:53:01: 16000000 INFO @ Fri, 26 Jun 2020 07:53:05: 6000000 INFO @ Fri, 26 Jun 2020 07:53:05: 11000000 INFO @ Fri, 26 Jun 2020 07:53:08: 17000000 INFO @ Fri, 26 Jun 2020 07:53:11: 7000000 INFO @ Fri, 26 Jun 2020 07:53:12: 12000000 INFO @ Fri, 26 Jun 2020 07:53:14: 18000000 INFO @ Fri, 26 Jun 2020 07:53:18: 8000000 INFO @ Fri, 26 Jun 2020 07:53:18: 13000000 INFO @ Fri, 26 Jun 2020 07:53:20: 19000000 INFO @ Fri, 26 Jun 2020 07:53:24: 9000000 INFO @ Fri, 26 Jun 2020 07:53:25: 14000000 INFO @ Fri, 26 Jun 2020 07:53:27: 20000000 INFO @ Fri, 26 Jun 2020 07:53:30: 10000000 INFO @ Fri, 26 Jun 2020 07:53:31: 15000000 INFO @ Fri, 26 Jun 2020 07:53:33: 21000000 INFO @ Fri, 26 Jun 2020 07:53:37: 11000000 INFO @ Fri, 26 Jun 2020 07:53:37: 16000000 INFO @ Fri, 26 Jun 2020 07:53:40: 22000000 INFO @ Fri, 26 Jun 2020 07:53:43: 12000000 INFO @ Fri, 26 Jun 2020 07:53:44: 17000000 INFO @ Fri, 26 Jun 2020 07:53:46: 23000000 INFO @ Fri, 26 Jun 2020 07:53:49: 13000000 INFO @ Fri, 26 Jun 2020 07:53:50: 18000000 INFO @ Fri, 26 Jun 2020 07:53:52: 24000000 INFO @ Fri, 26 Jun 2020 07:53:56: 14000000 INFO @ Fri, 26 Jun 2020 07:53:56: 19000000 INFO @ Fri, 26 Jun 2020 07:53:59: 25000000 INFO @ Fri, 26 Jun 2020 07:54:02: 15000000 INFO @ Fri, 26 Jun 2020 07:54:02: 20000000 INFO @ Fri, 26 Jun 2020 07:54:05: 26000000 INFO @ Fri, 26 Jun 2020 07:54:08: 16000000 INFO @ Fri, 26 Jun 2020 07:54:09: 21000000 INFO @ Fri, 26 Jun 2020 07:54:12: 27000000 INFO @ Fri, 26 Jun 2020 07:54:15: 17000000 INFO @ Fri, 26 Jun 2020 07:54:15: 22000000 INFO @ Fri, 26 Jun 2020 07:54:18: 28000000 INFO @ Fri, 26 Jun 2020 07:54:21: 18000000 INFO @ Fri, 26 Jun 2020 07:54:21: 23000000 INFO @ Fri, 26 Jun 2020 07:54:24: 29000000 INFO @ Fri, 26 Jun 2020 07:54:27: 24000000 INFO @ Fri, 26 Jun 2020 07:54:27: 19000000 INFO @ Fri, 26 Jun 2020 07:54:31: 30000000 INFO @ Fri, 26 Jun 2020 07:54:34: 25000000 INFO @ Fri, 26 Jun 2020 07:54:34: 20000000 INFO @ Fri, 26 Jun 2020 07:54:37: 31000000 INFO @ Fri, 26 Jun 2020 07:54:40: 26000000 INFO @ Fri, 26 Jun 2020 07:54:40: 21000000 INFO @ Fri, 26 Jun 2020 07:54:43: 32000000 INFO @ Fri, 26 Jun 2020 07:54:46: 27000000 INFO @ Fri, 26 Jun 2020 07:54:47: 22000000 INFO @ Fri, 26 Jun 2020 07:54:50: 33000000 INFO @ Fri, 26 Jun 2020 07:54:52: 28000000 INFO @ Fri, 26 Jun 2020 07:54:53: 23000000 INFO @ Fri, 26 Jun 2020 07:54:56: 34000000 INFO @ Fri, 26 Jun 2020 07:54:59: 29000000 INFO @ Fri, 26 Jun 2020 07:54:59: 24000000 INFO @ Fri, 26 Jun 2020 07:55:02: 35000000 INFO @ Fri, 26 Jun 2020 07:55:05: 30000000 INFO @ Fri, 26 Jun 2020 07:55:06: 25000000 INFO @ Fri, 26 Jun 2020 07:55:09: 36000000 INFO @ Fri, 26 Jun 2020 07:55:11: 31000000 INFO @ Fri, 26 Jun 2020 07:55:12: 26000000 INFO @ Fri, 26 Jun 2020 07:55:15: 37000000 INFO @ Fri, 26 Jun 2020 07:55:17: 32000000 INFO @ Fri, 26 Jun 2020 07:55:18: 27000000 INFO @ Fri, 26 Jun 2020 07:55:22: 38000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 26 Jun 2020 07:55:24: 33000000 INFO @ Fri, 26 Jun 2020 07:55:25: 28000000 INFO @ Fri, 26 Jun 2020 07:55:28: 39000000 INFO @ Fri, 26 Jun 2020 07:55:30: 34000000 INFO @ Fri, 26 Jun 2020 07:55:31: 29000000 INFO @ Fri, 26 Jun 2020 07:55:34: 40000000 INFO @ Fri, 26 Jun 2020 07:55:36: 35000000 INFO @ Fri, 26 Jun 2020 07:55:38: 30000000 INFO @ Fri, 26 Jun 2020 07:55:41: 41000000 INFO @ Fri, 26 Jun 2020 07:55:43: 36000000 INFO @ Fri, 26 Jun 2020 07:55:45: 31000000 INFO @ Fri, 26 Jun 2020 07:55:47: 42000000 INFO @ Fri, 26 Jun 2020 07:55:50: 37000000 INFO @ Fri, 26 Jun 2020 07:55:52: 32000000 INFO @ Fri, 26 Jun 2020 07:55:53: 43000000 INFO @ Fri, 26 Jun 2020 07:55:57: 38000000 INFO @ Fri, 26 Jun 2020 07:55:59: 33000000 INFO @ Fri, 26 Jun 2020 07:55:59: 44000000 INFO @ Fri, 26 Jun 2020 07:56:03: 39000000 INFO @ Fri, 26 Jun 2020 07:56:05: 34000000 INFO @ Fri, 26 Jun 2020 07:56:06: 45000000 INFO @ Fri, 26 Jun 2020 07:56:11: 40000000 INFO @ Fri, 26 Jun 2020 07:56:13: 35000000 INFO @ Fri, 26 Jun 2020 07:56:13: 46000000 INFO @ Fri, 26 Jun 2020 07:56:14: #1 tag size is determined as 50 bps INFO @ Fri, 26 Jun 2020 07:56:14: #1 tag size = 50 INFO @ Fri, 26 Jun 2020 07:56:14: #1 total tags in treatment: 21979958 INFO @ Fri, 26 Jun 2020 07:56:14: #1 user defined the maximum tags... INFO @ Fri, 26 Jun 2020 07:56:14: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 26 Jun 2020 07:56:14: #1 tags after filtering in treatment: 19778220 INFO @ Fri, 26 Jun 2020 07:56:14: #1 Redundant rate of treatment: 0.10 INFO @ Fri, 26 Jun 2020 07:56:14: #1 finished! INFO @ Fri, 26 Jun 2020 07:56:14: #2 Build Peak Model... INFO @ Fri, 26 Jun 2020 07:56:14: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 26 Jun 2020 07:56:16: #2 number of paired peaks: 249 WARNING @ Fri, 26 Jun 2020 07:56:16: Fewer paired peaks (249) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 249 pairs to build model! INFO @ Fri, 26 Jun 2020 07:56:16: start model_add_line... INFO @ Fri, 26 Jun 2020 07:56:16: start X-correlation... INFO @ Fri, 26 Jun 2020 07:56:16: end of X-cor INFO @ Fri, 26 Jun 2020 07:56:16: #2 finished! INFO @ Fri, 26 Jun 2020 07:56:16: #2 predicted fragment length is 150 bps INFO @ Fri, 26 Jun 2020 07:56:16: #2 alternative fragment length(s) may be 3,138,150,162 bps INFO @ Fri, 26 Jun 2020 07:56:16: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.05_model.r INFO @ Fri, 26 Jun 2020 07:56:16: #3 Call peaks... INFO @ Fri, 26 Jun 2020 07:56:16: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 26 Jun 2020 07:56:17: 41000000 INFO @ Fri, 26 Jun 2020 07:56:19: 36000000 INFO @ Fri, 26 Jun 2020 07:56:24: 42000000 INFO @ Fri, 26 Jun 2020 07:56:26: 37000000 INFO @ Fri, 26 Jun 2020 07:56:31: 43000000 INFO @ Fri, 26 Jun 2020 07:56:32: 38000000 BigWig に変換しました。 INFO @ Fri, 26 Jun 2020 07:56:37: 44000000 INFO @ Fri, 26 Jun 2020 07:56:39: 39000000 INFO @ Fri, 26 Jun 2020 07:56:44: 45000000 INFO @ Fri, 26 Jun 2020 07:56:45: 40000000 INFO @ Fri, 26 Jun 2020 07:56:50: 46000000 INFO @ Fri, 26 Jun 2020 07:56:51: #3 Call peaks for each chromosome... INFO @ Fri, 26 Jun 2020 07:56:51: #1 tag size is determined as 50 bps INFO @ Fri, 26 Jun 2020 07:56:51: #1 tag size = 50 INFO @ Fri, 26 Jun 2020 07:56:51: #1 total tags in treatment: 21979958 INFO @ Fri, 26 Jun 2020 07:56:51: #1 user defined the maximum tags... INFO @ Fri, 26 Jun 2020 07:56:51: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 26 Jun 2020 07:56:52: 41000000 INFO @ Fri, 26 Jun 2020 07:56:52: #1 tags after filtering in treatment: 19778220 INFO @ Fri, 26 Jun 2020 07:56:52: #1 Redundant rate of treatment: 0.10 INFO @ Fri, 26 Jun 2020 07:56:52: #1 finished! INFO @ Fri, 26 Jun 2020 07:56:52: #2 Build Peak Model... INFO @ Fri, 26 Jun 2020 07:56:52: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 26 Jun 2020 07:56:53: #2 number of paired peaks: 249 WARNING @ Fri, 26 Jun 2020 07:56:53: Fewer paired peaks (249) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 249 pairs to build model! INFO @ Fri, 26 Jun 2020 07:56:53: start model_add_line... INFO @ Fri, 26 Jun 2020 07:56:53: start X-correlation... INFO @ Fri, 26 Jun 2020 07:56:53: end of X-cor INFO @ Fri, 26 Jun 2020 07:56:53: #2 finished! INFO @ Fri, 26 Jun 2020 07:56:53: #2 predicted fragment length is 150 bps INFO @ Fri, 26 Jun 2020 07:56:53: #2 alternative fragment length(s) may be 3,138,150,162 bps INFO @ Fri, 26 Jun 2020 07:56:53: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.10_model.r INFO @ Fri, 26 Jun 2020 07:56:53: #3 Call peaks... INFO @ Fri, 26 Jun 2020 07:56:53: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 26 Jun 2020 07:56:57: 42000000 INFO @ Fri, 26 Jun 2020 07:57:03: 43000000 INFO @ Fri, 26 Jun 2020 07:57:07: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.05_peaks.xls INFO @ Fri, 26 Jun 2020 07:57:07: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.05_peaks.narrowPeak INFO @ Fri, 26 Jun 2020 07:57:07: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.05_summits.bed INFO @ Fri, 26 Jun 2020 07:57:07: Done! pass1 - making usageList (7 chroms): 0 millis pass2 - checking and writing primary data (452 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Fri, 26 Jun 2020 07:57:08: 44000000 INFO @ Fri, 26 Jun 2020 07:57:13: 45000000 INFO @ Fri, 26 Jun 2020 07:57:19: 46000000 INFO @ Fri, 26 Jun 2020 07:57:20: #1 tag size is determined as 50 bps INFO @ Fri, 26 Jun 2020 07:57:20: #1 tag size = 50 INFO @ Fri, 26 Jun 2020 07:57:20: #1 total tags in treatment: 21979958 INFO @ Fri, 26 Jun 2020 07:57:20: #1 user defined the maximum tags... INFO @ Fri, 26 Jun 2020 07:57:20: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 26 Jun 2020 07:57:20: #1 tags after filtering in treatment: 19778220 INFO @ Fri, 26 Jun 2020 07:57:20: #1 Redundant rate of treatment: 0.10 INFO @ Fri, 26 Jun 2020 07:57:20: #1 finished! INFO @ Fri, 26 Jun 2020 07:57:20: #2 Build Peak Model... INFO @ Fri, 26 Jun 2020 07:57:20: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 26 Jun 2020 07:57:21: #2 number of paired peaks: 249 WARNING @ Fri, 26 Jun 2020 07:57:21: Fewer paired peaks (249) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 249 pairs to build model! INFO @ Fri, 26 Jun 2020 07:57:21: start model_add_line... INFO @ Fri, 26 Jun 2020 07:57:22: start X-correlation... INFO @ Fri, 26 Jun 2020 07:57:22: end of X-cor INFO @ Fri, 26 Jun 2020 07:57:22: #2 finished! INFO @ Fri, 26 Jun 2020 07:57:22: #2 predicted fragment length is 150 bps INFO @ Fri, 26 Jun 2020 07:57:22: #2 alternative fragment length(s) may be 3,138,150,162 bps INFO @ Fri, 26 Jun 2020 07:57:22: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.20_model.r INFO @ Fri, 26 Jun 2020 07:57:22: #3 Call peaks... INFO @ Fri, 26 Jun 2020 07:57:22: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 26 Jun 2020 07:57:28: #3 Call peaks for each chromosome... INFO @ Fri, 26 Jun 2020 07:57:44: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.10_peaks.xls INFO @ Fri, 26 Jun 2020 07:57:44: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.10_peaks.narrowPeak INFO @ Fri, 26 Jun 2020 07:57:44: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.10_summits.bed INFO @ Fri, 26 Jun 2020 07:57:44: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (331 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Fri, 26 Jun 2020 07:57:58: #3 Call peaks for each chromosome... INFO @ Fri, 26 Jun 2020 07:58:14: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.20_peaks.xls INFO @ Fri, 26 Jun 2020 07:58:14: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.20_peaks.narrowPeak INFO @ Fri, 26 Jun 2020 07:58:14: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX1995024/SRX1995024.20_summits.bed INFO @ Fri, 26 Jun 2020 07:58:14: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (223 records, 4 fields): 1 millis CompletedMACS2peakCalling