<?xml version="1.0" encoding="UTF-8"?>
<csml:project xmlns:csml="http://www.csml.org/csml/version3" majorVersion="3" minorVersion="0" projectID="local" projectVersionID="undef">
<csml:model modelID="undef" modelVersionID="undef">
<csml:entitySet>
<csml:entity id="MO000066987" name="DDX58" refUnificationXrefID="ref847;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m41844">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="325.0" y="381.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="21.0" outlineColor="0 0 0 0" width="21.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_75175a" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#75175a;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_75175a);stroke:none;" d="M 55.1649 47.5686 c 0.5601 -7.2179 4.714 10.4493 -1.2168 -14.4358 c 2.6176 -7.4525 9.2483 -0.5606 -1.731 -25.2694 c 2.8438 -1.6074 6.452 -2.3695 7.7829 16.8886 c 2.2607 -1.648 3.0198 0.1667 -4.8357 -13.094 c -6.6798 -2.7638 11.3773 -1.2622 -14.0813 -3.302 c -6.2663 -4.7972 2.3258 -8.9846 -24.525 -6.1598 c -0.6471 -3.2063 -0.2561 -6.8791 18.4384 -2.1963 c -0.8663 -2.6634 1.0914 -2.8258 -13.9255 0.5606 c -4.6884 5.5095 2.3178 -11.2295 -7.4858 12.3956 c -6.4904 4.4877 -7.8112 -4.9922 -13.4267 21.4624 c -3.2439 -0.3741 -6.6099 -1.8821 3.6125 -18.246 c -2.7963 0.0021 -2.3455 -1.9131 -3.7709 13.4408 c 3.7821 6.1695 -9.9444 -5.6778 9.4547 10.9623 c 2.2549 7.5706 -7.1529 5.8991 16.2273 19.4243 c -1.3576 2.9749 -3.8296 5.7158 -16.206 -9.0802 c -0.862 2.6644 -2.5413 1.6432 11.5949 7.7464 c 7.026 -1.6967 -8.4636 7.7202 13.3291 -5.6201 c 7.8837 0.1913 3.39 8.6378 23.4555 -9.4575 c 2.4048 2.2129 4.243 5.4144 -13.6284 12.6339 c 2.2634 1.6448 0.7751 2.929 10.9372 -8.6533 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000103999" name="IFIH1" refUnificationXrefID="ref848;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m76904">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="527.0" y="331.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="17.0" outlineColor="0 0 0 0" width="17.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_1ec8f1" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#1ec8f1;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_1ec8f1);stroke:none;" d="M 60 48.5418 c -2.9644 -1.7553 -2.5903 -6.4943 -2.5531 -2.2866 c 4.9418 -1.2857 7.2631 -6.8443 -4.1717 -7.7833 l 6.3504 -2.0842 l 0.3744 -24.9285 c -2.6713 2.1389 -7.2945 0.3361 -3.0755 1.6028 c 0.2413 -4.8673 -4.5994 -8.6848 -9.0725 1.3684 l -0.1216 -6.3883 l -24.8123 -8.0421 c 1.3134 3.0773 -1.918 6.7021 0.6523 3.2769 c -4.7925 -1.7224 -10.1058 1.4769 -1.4353 8.6289 l -6.4257 -1.8641 l -15.7093 19.9582 c 3.4829 -0.2371 6.1091 3.8057 3.4785 0.4225 c -3.2035 3.8027 -1.6462 9.5975 8.1852 3.9646 l -3.8497 5.2361 l 15.1034 20.3768 c 0.8393 -3.2237 5.6937 -4.35 1.4976 -3.0159 c 2.8126 4.0727 9.0884 4.4548 6.494 -6.1787 l 4.0466 5.1002 l 25.0438 -7.3647 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000019398" name="TLR3" refUnificationXrefID="ref849;ref850;ref851;ref852;ref853;ref854;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m3965">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="862.0" y="374.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="18.0" outlineColor="0 0 0 0" width="18.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_933f3f" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#933f3f;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_933f3f);stroke:none;" d="M 60 48.54 l -0.3772 -11.808 c 13.6534 -12.4868 26.6272 14.8035 0.3772 -25.2737 l -11.9246 -3.3074 c -8.2669 -16.2079 23.0311 -19.5108 -25.1571 -8.1508 l -6.993 9.7635 c -18.7631 2.4691 -12.3928 -26.8612 -15.9253 20.2365 l 7.6025 9.3425 c -3.3288 17.7341 -30.6905 2.909 15.3149 20.6575 l 11.6914 -3.9898 c 16.7054 8.4916 -6.575 28.6596 25.3903 -7.4684 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000042126" name="TLR7" refUnificationXrefID="ref855;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m19940">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="890.0" y="470.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="19.0" outlineColor="0 0 0 0" width="19.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_bc3b31" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#bc3b31;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_bc3b31);stroke:none;" d="M 60 48.54 l -0.3772 -11.808 c 13.6534 -12.4868 26.6272 14.8035 0.3772 -25.2737 l -11.9246 -3.3074 c -8.2669 -16.2079 23.0311 -19.5108 -25.1571 -8.1508 l -6.993 9.7635 c -18.7631 2.4691 -12.3928 -26.8612 -15.9253 20.2365 l 7.6025 9.3425 c -3.3288 17.7341 -30.6905 2.909 15.3149 20.6575 l 11.6914 -3.9898 c 16.7054 8.4916 -6.575 28.6596 25.3903 -7.4684 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e9" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m9">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="185.553414718915" y="215.16465530469304"/>
<csml:shape depth="81" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1457.4142367511959" outlineColor="0 0 0 0" resourceID="20046" width="812.7578103739592"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e8" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m8">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="178.44488331121272" y="186.65080745915594"/>
<csml:shape depth="90" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1476.7818608076368" outlineColor="0 0 0 0" resourceID="20068" width="816.4855146185795"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cell_WithoutCellWall_"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e7" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m7">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="175.40418403332433" y="160.13695961361896"/>
<csml:shape depth="100" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1502.2832585509734" outlineColor="0 0 0 0" resourceID="20004" width="851.1157853834271"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cell"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000042007" name="TLR8" refUnificationXrefID="ref856;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m19823">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="894.0" y="570.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="19.0" outlineColor="0 0 0 0" width="19.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_ac3e3e" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#ac3e3e;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_ac3e3e);stroke:none;" d="M 60 48.54 l -0.3772 -11.808 c 13.6534 -12.4868 26.6272 14.8035 0.3772 -25.2737 l -11.9246 -3.3074 c -8.2669 -16.2079 23.0311 -19.5108 -25.1571 -8.1508 l -6.993 9.7635 c -18.7631 2.4691 -12.3928 -26.8612 -15.9253 20.2365 l 7.6025 9.3425 c -3.3288 17.7341 -30.6905 2.909 15.3149 20.6575 l 11.6914 -3.9898 c 16.7054 8.4916 -6.575 28.6596 25.3903 -7.4684 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000022224" name="dsRNA" refUnificationXrefID="ref857;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m119368">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="1051.0" y="375.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="18.0" outlineColor="0 0 0 0" width="18.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_691efd" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#691efd;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_691efd);stroke:none;" d="M 59.9996 30.0002 l -15.4678 -3.7536 c -9.2903 0.5201 -3.0479 -6.6761 -6.9808 -6.9004 l -32.0488 -5.8791 c -8.9965 1.9659 1.5646 -6.5422 -5.5022 -13.467 l 3.9806 13.4779 c 5.1653 6.7076 -5.152 5.624 -3.4102 8.6857 l 10.1452 26.9761 c 6.4643 5.7643 -7.3247 2.0977 -10.7157 10.8604 l 11.4876 -9.7242 c 4.125 -7.2277 8.1999 1.0521 10.3905 -1.7853 l 21.9036 -21.0973 c 2.5322 -7.7302 5.76 4.4445 16.2183 2.6067 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000041446" name="dsRNA:TLR3" refUnificationXrefID="ref858;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m19314">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="878.0" y="422.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="20.0" outlineColor="0 0 0 0" width="20.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_691efd" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#691efd;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_691efd);stroke:none;" d="M 49.9997 25.0002 l -12.8898 -3.128 c -7.7419 0.4334 -2.5399 -5.5634 -5.8173 -5.7503 l -26.7073 -4.8992 c -7.4971 1.6382 1.3038 -5.4518 -4.5852 -11.2225 l 3.3172 11.2316 c 4.3044 5.5897 -4.2933 4.6867 -2.8418 7.2381 l 8.4543 22.4801 c 5.3869 4.8036 -6.1039 1.7481 -8.9298 9.0503 l 9.573 -8.1035 c 3.4375 -6.0231 6.8332 0.8768 8.6588 -1.4878 l 18.253 -17.5811 c 2.1102 -6.4418 4.8 3.7038 13.5152 2.1722 z" /&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_933f3f" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#933f3f;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_933f3f);stroke:none;" d="M 60 50.45 l -0.3143 -9.84 c 11.3778 -10.4057 22.1893 12.3362 0.3143 -21.0614 l -9.9372 -2.7562 c -6.8891 -13.5066 19.1926 -16.259 -20.9642 -6.7923 l -5.8275 8.1362 c -15.6359 2.0576 -10.3273 -22.3843 -13.2711 16.8638 l 6.3354 7.7854 c -2.774 14.7784 -25.5754 2.4242 12.7624 17.2146 l 9.7428 -3.3248 c 13.9212 7.0763 -5.4792 23.883 21.1586 -6.2237 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e12" name="ssRNA" type="cso30:c:Rna">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m12">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="1040.0" y="469.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.00197325147994" outlineColor="0 0 0 0" resourceID="53" width="40.64898048673536"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e13" name="ssRNA:TLR7" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m13">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="898.5" y="515.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="34.88708616531462" outlineColor="0 0 0 0" resourceID="6" width="18.024994518745885"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e14" name="ssRNA:TLR8" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m14">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="866.5" y="605.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="37.360228020171014" outlineColor="0 0 0 0" resourceID="6" width="19.302784477088355"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000042012" name="TLR9" refUnificationXrefID="ref859;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m19828">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="843.0" y="651.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="18.0" outlineColor="0 0 0 0" width="18.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_933448" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#933448;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_933448);stroke:none;" d="M 60 48.54 l -0.3772 -11.808 c 13.6534 -12.4868 26.6272 14.8035 0.3772 -25.2737 l -11.9246 -3.3074 c -8.2669 -16.2079 23.0311 -19.5108 -25.1571 -8.1508 l -6.993 9.7635 c -18.7631 2.4691 -12.3928 -26.8612 -15.9253 20.2365 l 7.6025 9.3425 c -3.3288 17.7341 -30.6905 2.909 15.3149 20.6575 l 11.6914 -3.9898 c 16.7054 8.4916 -6.575 28.6596 25.3903 -7.4684 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e16" name="CpG DNA" type="cso30:c:Dna">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m16">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="1037.0" y="654.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="11.84797028389493" outlineColor="0 0 0 0" resourceID="3" width="54.68293977182277"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e17" name="TLR9:CpG DNA" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m17">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="763.5" y="675.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="33.46634509975882" outlineColor="0 0 0 0" resourceID="6" width="17.290944968208727"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e15" name="dsRNA" refUnificationXrefID="ref860;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m15">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="419.0" y="283.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="18.0" outlineColor="0 0 0 0" width="18.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_691efd" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#691efd;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_691efd);stroke:none;" d="M 59.9996 30.0002 l -15.4678 -3.7536 c -9.2903 0.5201 -3.0479 -6.6761 -6.9808 -6.9004 l -32.0488 -5.8791 c -8.9965 1.9659 1.5646 -6.5422 -5.5022 -13.467 l 3.9806 13.4779 c 5.1653 6.7076 -5.152 5.624 -3.4102 8.6857 l 10.1452 26.9761 c 6.4643 5.7643 -7.3247 2.0977 -10.7157 10.8604 l 11.4876 -9.7242 c 4.125 -7.2277 8.1999 1.0521 10.3905 -1.7853 l 21.9036 -21.0973 c 2.5322 -7.7302 5.76 4.4445 16.2183 2.6067 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e18" name="DDX58:dsRNA" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m18">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="386.5" y="353.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="22.876187302116318" outlineColor="0 0 0 0" resourceID="12" width="18.682219630061656"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e19" name="PKZ" type="cso30:c:mRNA">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m19">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="520.0" y="999.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="25.32871972318339" outlineColor="0 0 0 0" resourceID="37" width="47.491349480968864"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e20" name="Poly(rI:rC)" type="cso30:c:SmallMolecule">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m20">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="89.0" y="923.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="25.678721614802352" outlineColor="0 0 0 0" resourceID="65" width="45.315391084945325"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e21" name="DAI" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m21">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="501.0" y="530.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="18.399476755886496" outlineColor="0 0 0 0" resourceID="11" width="29.836989333869997"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e22" name="Z-DNA" type="cso30:c:Dna">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m22">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="266.0" y="705.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="13.0" outlineColor="0 0 0 0" resourceID="3" width="60.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e23" name="DAI:ZDNA" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m23">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="354.0" y="667.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="17.0" outlineColor="0 0 0 0" resourceID="4" width="60.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e24" name="ADAR1" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m24">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="285.0" y="427.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="17.16" outlineColor="0 0 0 0" resourceID="34" width="22.88"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e25" name="ADAR1:ZDNA" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m25">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="394.0" y="483.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="17.0" outlineColor="0 0 0 0" resourceID="4" width="60.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e26" name="SmtB" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m26">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="572.5" y="419.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="25.09156771986315" outlineColor="0 0 0 0" resourceID="35" width="15.473133427248944"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e27" name="DAI:SmtB" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m27">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="535.5" y="485.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="29.695050824862527" outlineColor="0 0 0 0" resourceID="12" width="24.250958173637727"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e28" name="Mar" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m28">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="561.0" y="591.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="33.648269410664184" outlineColor="0 0 0 0" resourceID="36" width="14.580916744621142"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e29" name="DAI:Mar" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m29">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="479.5" y="660.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="31.324779203466097" outlineColor="0 0 0 0" resourceID="12" width="25.581903016163974"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e30" name="ADARs" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m30">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="596.0" y="370.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.575971020326023" outlineColor="0 0 0 0" resourceID="11" width="31.74481787079895"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e31" name="SmtB:ADARs" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m31">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="648.5" y="513.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="29.36510581569738" outlineColor="0 0 0 0" resourceID="12" width="23.98150308281953"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e32" name="ADARs:Mar" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m32">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="624.5" y="638.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="27.675387435427428" outlineColor="0 0 0 0" resourceID="12" width="22.601566405599062"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e33" name="ADARs:dsRNA" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m33">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="669.5" y="268.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="24.835860689885024" outlineColor="0 0 0 0" resourceID="12" width="20.282619563406094"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e34" name="dsRNA:IFIH1" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m34">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="486.5" y="384.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="24.475920679886684" outlineColor="0 0 0 0" resourceID="12" width="19.988668555240793"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e35" name="ssRNA" type="cso30:c:Rna">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m35">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="252.0" y="261.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="20.96119272089454" outlineColor="0 0 0 0" resourceID="53" width="40.570050427537815"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e36" name="ssRNA:DDX58" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m36">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="243.5" y="369.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="29.715047492084658" outlineColor="0 0 0 0" resourceID="12" width="24.267288785202467"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e37" name="DLM-1" type="cso30:c:mRNA">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m37">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="623.0" y="977.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.97923875432526" outlineColor="0 0 0 0" resourceID="37" width="41.21107266435986"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000016665" name="IFNgamma" refUnificationXrefID="ref861;ref862;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m1639">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="1066.0" y="910.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="20.0" outlineColor="0 0 0 0" width="20.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_51abd9" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#51abd9;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_51abd9);stroke:none;" d="M 58.7388 48.5479 l -3.203 -27.4599 c 5.7007 -11.7063 1.8582 -5.0923 4.4642 -5.95 c -3.3816 -7.5855 7.31 -5.9574 -1.2612 -3.6489 l -27.8894 -5.5281 c -9.7061 -8.8812 -4.414 -3.2896 -4.4489 -5.9609 c -8.4754 0.7782 -3.5767 -8.5909 -3.9643 0.0369 l -14.0338 24.0434 c -11.699 6.2177 -4.5863 3.0593 -7.2138 2.2659 c -1.8568 8.0665 -9.5208 0.6478 -1.1887 3.672 l 19.2162 20.388 c 2.4753 12.7239 1.5793 5.1801 -0.0094 7.3613 c 7.3279 4.2073 -2.3075 8.9915 3.2294 2.2325 l 25.91 -11.443 c 13.2291 1.6463 5.5624 0.1425 7.208 2.2833 c 6.3859 -5.4664 8.095 4.909 3.1847 -2.292 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e38" name="IFN-alpha" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m38">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="1065.0" y="967.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="34.574368568755844" outlineColor="0 0 0 0" resourceID="36" width="14.9822263797942"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Extracellular"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000016660" name="IFNbeta" refUnificationXrefID="ref863;ref864;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m1636">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="1063.0" y="1043.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="18.0" outlineColor="0 0 0 0" width="18.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_da6342" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#da6342;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_da6342);stroke:none;" d="M 60 48.5413 l -0 -37.0821 l -37.0821 -11.4591 l -22.9179 30 l 22.9179 30 l 37.0821 -11.4591 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000042409" name="LPS" refUnificationXrefID="ref865;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m157177">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="1059.0" y="1099.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="18.0" outlineColor="0 0 0 0" width="18.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_698991" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#698991;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_698991);stroke:none;" d="M 60 32.3743 l -33.6576 -5.4359 c -30.9833 -3.1573 6.111 -20.3941 -26.3424 15.4502 c -17.6949 -23.4208 -17.913 -2.7301 14.7891 -37.6391 l 12.3807 33.5667 c 12.9077 29.9752 -19.7446 4.5967 25.8135 16.4189 c -10.3176 27.9274 6.7221 17.7825 -38.1951 5.2648 l 21.2769 -28.1309 c 18.0746 -26.819 13.6337 15.7984 0.528 -31.8691 c 28.0124 -4.5076 11.1899 -15.0524 23.406 32.3743 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e10" name="L.monocytogenes" type="cso30:c:Cell">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m10">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="335.5" y="1390.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="35.90229123272106" outlineColor="0 0 0 0" resourceID="42" width="24.533232342359398"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e39" name="S.flexneri" type="cso30:c:Cell">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m39">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="363.5" y="1470.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="35.90229123272106" outlineColor="0 0 0 0" resourceID="42" width="24.533232342359398"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e40" name="enterophathogenic e.coli" type="cso30:c:Cell">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m40">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="435.5" y="1530.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="35.90229123272106" outlineColor="0 0 0 0" resourceID="42" width="24.533232342359398"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e41" name="L.pnemophila" type="cso30:c:Cell">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m41">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="607.5" y="1518.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="35.90229123272106" outlineColor="0 0 0 0" resourceID="42" width="24.533232342359398"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e42" name="Type I IFN" type="cso30:c:mRNA">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m42">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="542.0" y="1180.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="26.020761245674738" outlineColor="0 0 0 0" resourceID="37" width="48.78892733564014"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e43" name="ISD" type="cso30:c:Dna">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m43">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="890.0" y="861.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="13.0" outlineColor="0 0 0 0" resourceID="3" width="60.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e44" name="B-DNA" type="cso30:c:Dna">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m44">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="542.0" y="769.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="13.0" outlineColor="0 0 0 0" resourceID="3" width="60.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e45" name="E3L" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m45">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="337.0" y="751.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="16.56" outlineColor="0 0 0 0" resourceID="34" width="22.080000000000002"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e46" name="E3L:dsRNA" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m46">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="436.5" y="774.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="28.345275787368777" outlineColor="0 0 0 0" resourceID="12" width="23.148641893017835"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e6" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m6">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="697.0" y="320.0"/>
<csml:shape depth="60" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="384.8360798740822" outlineColor="0 0 0 0" resourceID="20090" width="230.51095139665844"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_EndosomeLumen"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e5" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m5">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="697.0" y="320.0"/>
<csml:shape depth="70" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="384.8360798740822" outlineColor="0 0 0 0" resourceID="20010" width="230.51095139665844"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Endosome"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e11" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m11">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="697.0" y="320.0"/>
<csml:shape depth="60" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="384.8360798740822" outlineColor="0 0 0 0" resourceID="20048" width="230.51095139665844"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_EndosomeMembrane"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e1" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m1">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="164.00156174124325" y="153.82023486107224"/>
<csml:shape depth="81" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1569.731774409567" outlineColor="0 0 0 0" resourceID="20003" width="867.8758113544294"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_PlasmaMembrane"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e3" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m3">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="181.35907796833152" y="175.44188464632805"/>
<csml:shape depth="71" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1526.4884748390568" outlineColor="0 0 0 0" resourceID="20065" width="833.1607789002518"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e4" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m4">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="213.4704829884456" y="213.2797717705253"/>
<csml:shape depth="71" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1450.8127005906606" outlineColor="0 0 0 0" resourceID="20066" width="768.9379688600245"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_PlasmaMembrane_InternalSideOfPlasmaMembrane_"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e2" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m2">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="164.00156174124325" y="153.82023486107224"/>
<csml:shape depth="71" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1569.731774409567" outlineColor="0 0 0 0" resourceID="20064" width="867.8758113544294"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_PlasmaMembrane_ExternalSideOfPlasmaMembrane_"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e53" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m53">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="373.66397737493884" y="864.2030321831685"/>
<csml:shape depth="60" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="511.042215535339" outlineColor="0 0 0 0" resourceID="20113" width="452.84674793235433"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearLumen"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e58" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m58">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="630.9435117088676" y="1224.206287830414"/>
<csml:shape depth="40" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="93.11362401703224" outlineColor="0 0 0 0" resourceID="20062" width="82.57282351933519"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleolus"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e54" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m54">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="366.710476446995" y="856.0826579956365"/>
<csml:shape depth="50" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="527.2829639104025" outlineColor="0 0 0 0" resourceID="20111" width="466.75374978824226"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearOuterMembrane"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e50" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m50">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="366.710476446995" y="856.0826579956365"/>
<csml:shape depth="50" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="527.2829639104025" outlineColor="0 0 0 0" resourceID="20112" width="466.75374978824226"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearEnvelopeLumen"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e56" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m56">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="373.66397737493884" y="864.2030321831685"/>
<csml:shape depth="50" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="511.042215535339" outlineColor="0 0 0 0" resourceID="20063" width="452.84674793235433"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e57" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m57">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="707.4320219162515" y="1072.6259696631512"/>
<csml:shape depth="40" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="32.88264452072159" outlineColor="0 0 0 0" resourceID="20117" width="29.160209706389665"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearBody"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e55" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m55">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="366.710476446995" y="856.0826579956365"/>
<csml:shape depth="70" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="527.2829639104025" outlineColor="0 0 0 0" resourceID="20025" width="466.75374978824226"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleus"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e52" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m52">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="372.7947897589461" y="863.1203156248317"/>
<csml:shape depth="50" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="513.2076486520137" outlineColor="0 0 0 0" resourceID="20110" width="454.58512316434064"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearInnerMembrane"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e51" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m51">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="417.1233581745891" y="868.578497691455"/>
<csml:shape depth="50" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="511.042215535339" outlineColor="0 0 0 0" resourceID="20021" width="272.924911421803"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearPore"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e59" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m59">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="366.710476446995" y="856.0826579956365"/>
<csml:shape depth="60" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="527.2829639104025" outlineColor="0 0 0 0" resourceID="20022" width="466.75374978824226"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearEnvelope"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e61" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m61">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="476.22811606211366" y="1063.96423719645"/>
<csml:shape depth="40" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="113.44009525374695" outlineColor="0 0 0 0" resourceID="20114" width="50.59327915732855"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearChromosome"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e60" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m60">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="476.72170902950256" y="1090.4028501824168"/>
<csml:shape depth="30" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="8.865363882071641" outlineColor="0 0 0 0" resourceID="20043" width="14.781405433199788"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Chromatin"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e62" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m62">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="497.45261365982213" y="1137.7464129712444"/>
<csml:shape depth="30" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="9.837623436639301" outlineColor="0 0 0 0" resourceID="20115" width="7.897487478217139"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearCentromere"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e47" name="DAI:B-DNA" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m47">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="662.0" y="703.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="17.0" outlineColor="0 0 0 0" resourceID="4" width="60.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
</csml:entity>
<csml:entity id="MO000019331" name="TBK1" refUnificationXrefID="ref866;ref867;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m3902">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="793.0" y="729.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_d73c10" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#d73c10;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_d73c10);stroke:none;" d="M 59.9986 48.5407 c 0.9871 -13.4342 0.1887 -4.8076 -15.7675 -1.0439 c 3.9483 -9.4993 10.8696 -9.6801 13.1979 -13.904 l 2.57 -22.1338 c -13.1289 -5.0441 -4.7493 -1.6563 -5.9165 13.9392 c -8.279 -6.5065 -6.3213 -12.8227 -9.8259 -16.234 l -21.3394 -9.1642 c -9.1011 10.3168 -3.1239 3.7841 12.1112 9.6592 c -9.065 5.4778 -14.7763 1.7554 -19.2702 3.8711 l -15.7584 16.47 c 7.504 11.4202 2.8186 3.9949 13.4017 -7.9699 c 2.677 9.8921 -2.8109 13.9075 -2.0838 18.6265 l 11.6003 19.3432 c 13.739 -3.2587 4.8659 -1.3151 -3.8285 -14.5846 c 10.7193 0.6358 13.0389 6.8403 17.9825 7.6409 l 22.9278 -4.5152 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000007694" name="IRF-3" refUnificationXrefID="ref868;ref869;ref870;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m977">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="640.0" y="756.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="24.0" outlineColor="0 0 0 0" width="24.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_6ad24b" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#6ad24b;stop-opacity:1;" offset="2%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 60 48.5413 c -5.4791 -8.878 6.0417 -4.3573 -9.8171 -2.9348 l -4.5651 -27.6151 c -1.9754 -5.4859 12.2339 -9.9822 14.3816 -6.5322 c -10.571 2.2124 -2.4899 -6.8115 -5.9681 7.9727 l -29.0256 -4.4044 c -6.096 0.0919 -6.2013 -14.1503 -2.0879 -15.0274 c -1.0542 10.2454 -7.5808 0.1474 6.1282 7.8622 l -13.374 24.8929 c -1.7923 5.5423 -16.0665 1.2366 -15.6721 -2.7553 c 9.9194 4.1194 -2.1948 6.9024 9.7557 -3.1134 l 20.7599 19.7894 c 4.9886 3.3337 -3.7283 14.915 -7.5982 13.3243 c 7.1844 -7.6993 6.2238 4.1184 -0.0987 -9.7867 l 26.2042 -12.6627 c 4.875 -3.4821 13.7627 7.9809 10.9766 10.9902 z" style="fill:url(#MO_6ad24b);stroke:none;"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e48" name="DAI:B-DNA:IRF-3:TBK1" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m48">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="855.0" y="805.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="30.147058823529413" outlineColor="0 0 0 0" resourceID="31" width="18.088235294117652"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
</csml:entity>
<csml:entity id="MO000041456" name="IRF-3{p}" refUnificationXrefID="ref871;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m19324">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="852.0" y="952.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="24.0" outlineColor="0 0 0 0" width="24.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;linearGradient gradientTransform="" id="stroke1_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:#808080;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;linearGradient gradientTransform="" id="stroke2_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:#008000;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;linearGradient gradientTransform="" id="stroke3_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:#00ff00;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;linearGradient gradientTransform="" id="color3_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:blue;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;linearGradient gradientTransform="" id="color2_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:orange;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;radialGradient gradientTransform="" id="color1_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:yellow;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;radialGradient id="MO_6ad24b" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#6ad24b;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 60 48.5413 c -5.4791 -8.878 6.0417 -4.3573 -9.8171 -2.9348 l -4.5651 -27.6151 c -1.9754 -5.4859 12.2339 -9.9822 14.3816 -6.5322 c -10.571 2.2124 -2.4899 -6.8115 -5.9681 7.9727 l -29.0256 -4.4044 c -6.096 0.0919 -6.2013 -14.1503 -2.0879 -15.0274 c -1.0542 10.2454 -7.5808 0.1474 6.1282 7.8622 l -13.374 24.8929 c -1.7923 5.5423 -16.0665 1.2366 -15.6721 -2.7553 c 9.9194 4.1194 -2.1948 6.9024 9.7557 -3.1134 l 20.7599 19.7894 c 4.9886 3.3337 -3.7283 14.915 -7.5982 13.3243 c 7.1844 -7.6993 6.2238 4.1184 -0.0987 -9.7867 l 26.2042 -12.6627 c 4.875 -3.4821 13.7627 7.9809 10.9766 10.9902 z" style="fill:url(#MO_6ad24b);stroke:none;"/&gt;
&lt;ellipse rx="11.5078" ry="11.716" style="fill:url(#color1_0_7J]v]j1TnAamZwDU);stroke:none;" cx="11.7917" cy="12"/&gt;
&lt;path style="fill:url(#color2_0_7J]v]j1TnAamZwDU);stroke:none;" d="M 0 12 C 0 18.6169 5.2898 24 11.7917 24 c 6.5021 0 11.7918 -5.3831 11.7918 -12 C 23.5834 5.3832 18.2937 0 11.7917 0 C 5.2898 0 0 5.3832 0 12 z M 0.568 12 C 0.568 5.6964 5.6029 0.568 11.7917 0.568 C 17.9805 0.568 23.0154 5.6964 23.0154 12 c 0 6.3036 -5.035 11.432 -11.2238 11.432 C 5.6029 23.432 0.568 18.3036 0.568 12 z"/&gt;
&lt;path style="fill:url(#color3_0_7J]v]j1TnAamZwDU);stroke:none;" d="M 8.6611 19.6732 c 0 0.5832 -0.4166 0.8748 -0.9789 0.8748 c -0.5832 0 -0.9789 -0.2916 -0.9789 -0.8956 V 6.4471 c 0 -1.6038 0.6456 -2.2495 2.1244 -2.2495 h 4.624 c 3.291 0 5.1446 1.6871 5.1446 4.6447 c 0 3.1243 -1.9161 4.9363 -5.228 4.9363 h -4.7072 V 19.6732 z M 13.3267 12.0292 c 2.1037 0 3.2284 -1.1247 3.2284 -3.1452 c 0 -1.8746 -1.1456 -2.916 -3.2284 -2.916 h -3.9991 c -0.4582 0 -0.6665 0.2708 -0.6665 0.729 v 5.3322 H 13.3267 z"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000088437" name="IRF-3{p}:IRF-3{p}" refUnificationXrefID="ref872;ref873;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m316590">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="891.0" y="1131.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="42.0" outlineColor="0 0 0 0" width="42.0">&lt;svg contentScriptType="text/ecmascript" width="100" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 100 100" height="100" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_76b43b" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#76b43b;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;radialGradient id="MO_9fdb4b" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#9fdb4b;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;linearGradient gradientTransform="" id="color2" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" y2="0%" x2="100%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:orange;stop-opacity:1;" offset="0%"/&gt;
&lt;/linearGradient&gt;
&lt;radialGradient gradientTransform="" id="color1" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:yellow;stop-opacity:1;" offset="100%"/&gt;
&lt;/radialGradient&gt;
&lt;linearGradient gradientTransform="" id="color20" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" y2="0%" x2="100%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:orange;stop-opacity:1;" offset="0%"/&gt;
&lt;/linearGradient&gt;
&lt;radialGradient gradientTransform="" id="color10" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:yellow;stop-opacity:1;" offset="100%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 50 40.4511 c -4.5659 -7.3983 5.0348 -3.6311 -8.1809 -2.4457 l -3.8042 -23.0126 c -1.6462 -4.5716 10.1949 -8.3185 11.9847 -5.4435 c -8.8092 1.8437 -2.0749 -5.6762 -4.9734 6.6439 l -24.188 -3.6703 c -5.08 0.0766 -5.1678 -11.7919 -1.7399 -12.5228 c -0.8785 8.5378 -6.3173 0.1228 5.1068 6.5518 l -11.145 20.7441 c -1.4936 4.6186 -13.3888 1.0305 -13.0601 -2.2961 c 8.2662 3.4328 -1.829 5.752 8.1298 -2.5945 l 17.2999 16.4912 c 4.1572 2.7781 -3.1069 12.4292 -6.3318 11.1036 c 5.987 -6.4161 5.1865 3.432 -0.0822 -8.1556 l 21.8368 -10.5522 c 4.0625 -2.9018 11.4689 6.6508 9.1472 9.1585 z" style="fill:url(#MO_9fdb4b);stroke:none;" transform="matrix( 1, 0, 0, 1, 7, 11)"/&gt;
&lt;path id="0" d="M 50 40.4511 c -4.5659 -7.3983 5.0348 -3.6311 -8.1809 -2.4457 l -3.8042 -23.0126 c -1.6462 -4.5716 10.1949 -8.3185 11.9847 -5.4435 c -8.8092 1.8437 -2.0749 -5.6762 -4.9734 6.6439 l -24.188 -3.6703 c -5.08 0.0766 -5.1678 -11.7919 -1.7399 -12.5228 c -0.8785 8.5378 -6.3173 0.1228 5.1068 6.5518 l -11.145 20.7441 c -1.4936 4.6186 -13.3888 1.0305 -13.0601 -2.2961 c 8.2662 3.4328 -1.829 5.752 8.1298 -2.5945 l 17.2999 16.4912 c 4.1572 2.7781 -3.1069 12.4292 -6.3318 11.1036 c 5.987 -6.4161 5.1865 3.432 -0.0822 -8.1556 l 21.8368 -10.5522 c 4.0625 -2.9018 11.4689 6.6508 9.1472 9.1585 z" style="fill:url(#MO_9fdb4b);stroke:none;" transform="matrix( 1, 0, 0, 1, 24, 36)"/&gt;
&lt;g id="1"&gt;
&lt;ellipse transform="matrix( 0.2072759195200919, 0, 0.0108628706408984, 0.1518737672583826, 39.71462453257112, 16.000000000000004)" style="fill:url(#color10);stroke:none;" rx="121.551" cx="124.55" cy="126.75" ry="123.75"/&gt;
&lt;path d="M0,126.75C0,196.641,55.873,253.5,124.55,253.5c68.678,0,124.551-56.859,124.551-126.75 C249.1,56.86,193.227,0,124.55,0C55.873,0,0,56.86,0,126.75z M6,126.75C6,60.168,59.181,6,124.55,6 C189.919,6,243.1,60.168,243.1,126.75c0,66.582-53.182,120.75-118.551,120.75C59.181,247.5,6,193.332,6,126.75z" style="fill:url(#color20);stroke:none;" transform="matrix( 0.2072759195200919, 0, 0.0108628706408984, 0.1518737672583826, 39.71462453257112, 16.000000000000004)"/&gt;
&lt;/g&gt;
&lt;text x="65" y="39" style="font-size:12pt;fill:#0000ff;" transform="matrix( 1, 0, 0, 1, -1, 6)"&gt;
P&lt;/text&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e49" name="IRF-3{p}:IRF-3{p}" refUnificationXrefID="ref874;ref875;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m49">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="703.0" y="1211.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="42.0" outlineColor="0 0 0 0" width="42.0">&lt;svg contentScriptType="text/ecmascript" width="100" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 100 100" height="100" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_76b43b" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#76b43b;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;radialGradient id="MO_9fdb4b" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#9fdb4b;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;linearGradient gradientTransform="" id="color2" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" y2="0%" x2="100%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:orange;stop-opacity:1;" offset="0%"/&gt;
&lt;/linearGradient&gt;
&lt;radialGradient gradientTransform="" id="color1" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:yellow;stop-opacity:1;" offset="100%"/&gt;
&lt;/radialGradient&gt;
&lt;linearGradient gradientTransform="" id="color20" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" y2="0%" x2="100%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:orange;stop-opacity:1;" offset="0%"/&gt;
&lt;/linearGradient&gt;
&lt;radialGradient gradientTransform="" id="color10" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:yellow;stop-opacity:1;" offset="100%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 50 40.4511 c -4.5659 -7.3983 5.0348 -3.6311 -8.1809 -2.4457 l -3.8042 -23.0126 c -1.6462 -4.5716 10.1949 -8.3185 11.9847 -5.4435 c -8.8092 1.8437 -2.0749 -5.6762 -4.9734 6.6439 l -24.188 -3.6703 c -5.08 0.0766 -5.1678 -11.7919 -1.7399 -12.5228 c -0.8785 8.5378 -6.3173 0.1228 5.1068 6.5518 l -11.145 20.7441 c -1.4936 4.6186 -13.3888 1.0305 -13.0601 -2.2961 c 8.2662 3.4328 -1.829 5.752 8.1298 -2.5945 l 17.2999 16.4912 c 4.1572 2.7781 -3.1069 12.4292 -6.3318 11.1036 c 5.987 -6.4161 5.1865 3.432 -0.0822 -8.1556 l 21.8368 -10.5522 c 4.0625 -2.9018 11.4689 6.6508 9.1472 9.1585 z" style="fill:url(#MO_9fdb4b);stroke:none;" transform="matrix( 1, 0, 0, 1, 7, 11)"/&gt;
&lt;path id="0" d="M 50 40.4511 c -4.5659 -7.3983 5.0348 -3.6311 -8.1809 -2.4457 l -3.8042 -23.0126 c -1.6462 -4.5716 10.1949 -8.3185 11.9847 -5.4435 c -8.8092 1.8437 -2.0749 -5.6762 -4.9734 6.6439 l -24.188 -3.6703 c -5.08 0.0766 -5.1678 -11.7919 -1.7399 -12.5228 c -0.8785 8.5378 -6.3173 0.1228 5.1068 6.5518 l -11.145 20.7441 c -1.4936 4.6186 -13.3888 1.0305 -13.0601 -2.2961 c 8.2662 3.4328 -1.829 5.752 8.1298 -2.5945 l 17.2999 16.4912 c 4.1572 2.7781 -3.1069 12.4292 -6.3318 11.1036 c 5.987 -6.4161 5.1865 3.432 -0.0822 -8.1556 l 21.8368 -10.5522 c 4.0625 -2.9018 11.4689 6.6508 9.1472 9.1585 z" style="fill:url(#MO_9fdb4b);stroke:none;" transform="matrix( 1, 0, 0, 1, 24, 36)"/&gt;
&lt;g id="1"&gt;
&lt;ellipse transform="matrix( 0.2072759195200919, 0, 0.0108628706408984, 0.1518737672583826, 39.71462453257112, 16.000000000000004)" style="fill:url(#color10);stroke:none;" rx="121.551" cx="124.55" cy="126.75" ry="123.75"/&gt;
&lt;path d="M0,126.75C0,196.641,55.873,253.5,124.55,253.5c68.678,0,124.551-56.859,124.551-126.75 C249.1,56.86,193.227,0,124.55,0C55.873,0,0,56.86,0,126.75z M6,126.75C6,60.168,59.181,6,124.55,6 C189.919,6,243.1,60.168,243.1,126.75c0,66.582-53.182,120.75-118.551,120.75C59.181,247.5,6,193.332,6,126.75z" style="fill:url(#color20);stroke:none;" transform="matrix( 0.2072759195200919, 0, 0.0108628706408984, 0.1518737672583826, 39.71462453257112, 16.000000000000004)"/&gt;
&lt;/g&gt;
&lt;text x="65" y="39" style="font-size:12pt;fill:#0000ff;" transform="matrix( 1, 0, 0, 1, -1, 6)"&gt;
P&lt;/text&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e63" name="IFN-alpha" type="cso30:c:mRNA">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m63">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="494.0" y="1102.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="27.681660899653977" outlineColor="0 0 0 0" resourceID="37" width="51.90311418685121"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleoplasm"/>
</csml:entity>
<csml:entity id="G010228" name="IFN-beta" refUnificationXrefID="ref876;ref877;" type="cso30:c:mRNA">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m93217">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="589.0" y="1069.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="30.0" outlineColor="0 0 0 0" width="30.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;&lt;linearGradient xmlns:xlink="http://www.w3.org/1999/xlink" gradientTransform="" gradientUnits="objectBoundingBox" id="id_#ffd30f" spreadMethod="pad" x1="0%" x2="100%" y1="0%" y2="0%"&gt;&lt;stop offset="0%" style="stop-color:#ffd30f;stop-opacity:1;"/&gt;&lt;stop offset="100%" style="stop-color:#ffd30f;stop-opacity:1;"/&gt;&lt;/linearGradient&gt;&lt;linearGradient xmlns:xlink="http://www.w3.org/1999/xlink" gradientTransform="" gradientUnits="objectBoundingBox" id="id_#28163F" spreadMethod="pad" x1="0%" x2="100%" y1="0%" y2="0%"&gt;&lt;stop offset="0%" style="stop-color:#28163F;stop-opacity:1;"/&gt;&lt;stop offset="100%" style="stop-color:#28163F;stop-opacity:1;"/&gt;&lt;/linearGradient&gt;&lt;/defs&gt;&lt;polygon style="fill:url(#id_#28163F);stroke:none;" points="0,60 5.4121,55.4096 5.7389,55.06 6.0446,54.4747 6.3308,53.669 6.5988,52.6597 6.85,51.4625 7.086,50.0951 7.3084,48.5725 7.5185,46.9122 7.7176,45.1294 7.9075,43.2418 8.0893,41.2648 8.2647,39.2155 8.4352,37.1098 8.6021,34.9635 8.7669,32.7941 8.9312,30.6181 9.0962,28.4512 9.2635,26.3088 9.4348,24.2093 9.6113,22.1683 9.7943,20.2017 9.9856,18.3261 10.1866,16.5582 10.3987,14.9142 10.6231,13.4103 10.8617,12.0629 11.1155,10.8889 11.3866,9.9046 11.6759,9.1255 11.9852,8.5686 12.3157,8.2502 12.6689,8.1875 13.026,8.3869 13.3701,8.8365 13.702,9.519 10.3627,2.6373 9.9474,1.7838 9.5171,1.2214 9.0714,0.9722 8.6295,1.0511 8.2163,1.4488 7.8298,2.1448 7.4682,3.1188 7.1295,4.3492 6.812,5.8167 6.5139,7.5009 6.2331,9.3809 5.9681,11.4358 5.717,13.646 5.4777,15.9899 5.2488,18.4483 5.0285,20.9998 4.8145,23.6243 4.6051,26.3015 4.3989,29.0108 4.1935,31.7312 3.9875,34.443 3.7788,37.1246 3.5658,39.7578 3.3465,42.319 3.1191,44.7906 2.8818,47.1504 2.633,49.3783 2.3703,51.4539 2.0924,53.3568 1.7973,55.0662 1.4832,56.5624 1.1482,57.8244 0.7907,58.8315 0.4085,59.5636" /&gt;&lt;polygon style="fill:url(#id_#ffd30f);stroke:none;" points="10.3627,2.6373 13.702,9.519 14.0227,10.4186 14.3318,11.5175 14.6304,12.7984 14.9186,14.2465 15.197,15.8431 15.4659,17.5716 15.726,19.4163 15.9776,21.3597 16.2211,23.3859 16.4571,25.4767 16.6861,27.6164 16.9084,29.7868 17.1245,31.9728 17.335,34.1571 17.5402,36.3224 17.7404,38.4523 17.9361,40.5304 18.1283,42.5388 18.3167,44.4618 18.5024,46.2823 18.6855,47.9831 18.8666,49.5479 19.0458,50.9596 19.2242,52.2015 19.4018,53.2575 19.579,54.1096 19.7564,54.7419 19.9346,55.1368 20.114,55.2787 20.3337,55.1534 20.5441,54.7661 18.9149,59.196 18.6519,59.6798 18.3775,59.8366 18.1532,59.6598 17.9304,59.1655 17.7086,58.3754 17.4871,57.3097 17.265,55.9903 17.0423,54.4377 16.818,52.6729 16.5919,50.717 16.3629,48.5909 16.1309,46.3156 15.8951,43.9118 15.6551,41.4012 15.4103,38.8036 15.1599,36.141 14.9033,33.4344 14.6407,30.7043 14.3704,27.9718 14.0925,25.258 13.8063,22.5839 13.5114,19.9701 13.2069,17.438 12.8924,15.009 12.5674,12.7032 12.2313,10.5418 11.883,8.5458 11.5229,6.7363 11.1497,5.1345 10.7633,3.7615" /&gt;&lt;polygon style="fill:url(#id_#ffd30f);stroke:none;" points="56.1668,56.8968 50.3457,52.9266 50.4902,52.9972 50.63,53.0141 50.7648,52.982 50.8965,52.9024 51.0238,52.7798 51.1481,52.6161 51.2686,52.4147 51.3872,52.1783 51.5027,51.9101 51.6164,51.6134 51.7283,51.2895 51.8385,50.9434 51.9478,50.5768 52.0561,50.1937 52.1639,49.7964 52.2717,49.3876 52.3797,48.9706 52.4881,48.5483 52.5974,48.1236 52.7074,47.7 52.8194,47.2798 52.9331,46.8666 53.049,46.4623 53.1667,46.0709 53.2883,45.6943 53.4119,45.3375 60,47.4093 59.8448,47.8561 59.6937,48.3264 59.5458,48.8158 59.4014,49.3208 59.2591,49.8379 59.1195,50.3633 58.9816,50.8925 58.845,51.4238 58.7092,51.9512 58.5744,52.4725 58.4398,52.9833 58.305,53.4804 58.1698,53.9597 58.033,54.4173 57.8951,54.8499 57.7555,55.2542 57.6133,55.6255 57.4686,55.9613 57.3209,56.2565 57.1694,56.5081 57.0146,56.713 56.8554,56.8663 56.6913,56.9653 56.5224,57.0062 56.3475,56.984" /&gt;&lt;polygon style="fill:url(#id_#28163F);stroke:none;" points="51.4421,42.8884 46.5659,41.7203 46.7028,41.8023 46.8376,41.9525 46.9702,42.1664 47.1013,42.4378 47.231,42.761 47.3586,43.131 47.485,43.5425 47.6101,43.9887 47.7331,44.4656 47.8552,44.9675 47.9761,45.488 48.0958,46.0228 48.2148,46.5658 48.3322,47.1106 48.4494,47.6533 48.5655,48.188 48.6806,48.7082 48.795,49.2094 48.9091,49.6863 49.0228,50.1321 49.1361,50.5433 49.2485,50.9129 49.3616,51.2355 49.5412,51.6837 49.7141,52.0613 49.8808,52.3714 50.0415,52.6172 50.1962,52.8009 50.3457,52.9266 56.1668,56.8968 55.98,56.7393 55.7863,56.5095 55.5857,56.2025 55.3774,55.8145 55.1615,55.3428 54.9367,54.7828 54.796,54.3789 54.6547,53.9171 54.5133,53.4035 54.3712,52.8463 54.2288,52.2499 54.0854,51.6235 53.9414,50.9728 53.7963,50.3052 53.6505,49.6264 53.503,48.9453 53.3548,48.2666 53.2051,47.5986 53.0539,46.9476 52.9015,46.3204 52.7472,45.7241 52.5913,45.1661 52.4332,44.6518 52.2736,44.1894 52.1118,43.7852 51.9481,43.446 51.7817,43.1788 51.6129,42.9908" /&gt;&lt;polygon style="fill:url(#id_#ffd30f);stroke:none;" points="46.5072,55.376 42.6178,51.7104 42.8505,51.8235 43.0946,51.7695 43.3515,51.5269 43.6224,51.0766 43.9089,50.3965 44.2118,49.4669 44.5328,48.2673 44.873,46.7766 45.2338,44.9751 45.3918,44.1922 45.5468,43.528 45.6996,42.976 45.85,42.5312 45.9977,42.1879 46.143,41.9407 46.2862,41.784 46.4271,41.7127 46.5659,41.7203 51.4421,42.8884 51.2686,42.8787 51.0923,42.968 50.9139,43.1639 50.7321,43.473 50.5475,43.9021 50.3595,44.4587 50.1684,45.1481 49.9745,45.9788 49.7769,46.9562 49.326,49.2087 48.9008,51.0721 48.4993,52.5718 48.1208,53.7337 47.7629,54.5837 47.4244,55.1469 47.103,55.4494 46.7979,55.5179" /&gt;&lt;polygon style="fill:url(#id_#28163F);stroke:none;" points="42.7693,45.6178 39.6278,43.9039 39.843,44.061 40.0506,44.359 40.2515,44.7778 40.4475,45.2963 40.6388,45.8933 40.828,46.5502 41.015,47.2449 41.2027,47.9575 41.3909,48.6667 41.5816,49.3527 41.7764,49.9943 41.9763,50.5717 42.182,51.0638 42.3954,51.4504 42.6178,51.7104 46.5072,55.376 46.2289,55.0506 45.9622,54.5678 45.7048,53.9528 45.4555,53.2308 45.2122,52.4285 44.9734,51.5712 44.7381,50.6848 44.5038,49.7943 44.2696,48.9259 44.0336,48.1049 43.7941,47.358 43.5493,46.7098 43.2981,46.1868 43.0389,45.814" /&gt;&lt;polygon style="fill:url(#id_#ffd30f);stroke:none;" points="37.2968,58.9458 35.2497,54.5661 35.4034,54.8741 35.5619,55.0825 35.7257,55.1839 35.8945,55.1721 36.0692,55.0399 36.2492,54.781 36.4354,54.3885 36.6279,53.8562 36.8266,53.1772 37.0321,52.3448 37.2442,51.3518 37.4635,50.1923 37.789,48.4808 38.0959,47.0746 38.3862,45.9539 38.6604,45.0973 38.9205,44.4843 39.1677,44.0949 39.403,43.9084 39.6278,43.9039 42.7693,45.6178 42.4887,45.6233 42.1944,45.857 41.8857,46.3439 41.5604,47.1099 41.2175,48.1807 40.8548,49.5814 40.4708,51.339 40.0643,53.4783 39.7901,54.9278 39.5249,56.1689 39.2682,57.2097 39.0199,58.059 38.7793,58.7239 38.5464,59.214 38.3212,59.5379 38.103,59.7034 37.8918,59.7179 37.6872,59.5912 37.4889,59.331" /&gt;&lt;polygon style="fill:url(#id_#28163F);stroke:none;" points="18.9149,59.196 20.5441,54.7661 20.7465,54.1348 20.9416,53.2765 21.1309,52.2081 21.3148,50.9479 21.4944,49.5115 21.6709,47.9184 21.845,46.1844 22.0182,44.3275 22.1908,42.3647 22.3646,40.3133 22.5398,38.1907 22.7176,36.0147 22.8994,33.8023 23.0856,31.5706 23.2776,29.3372 23.4763,27.1193 23.6825,24.9344 23.8976,22.7999 24.122,20.7326 24.3571,18.7501 24.604,16.87 24.8633,15.1097 25.136,13.4858 25.4234,12.0162 25.7263,10.7186 26.0457,9.6097 26.3825,8.7074 26.7381,8.028 27.1129,7.5891 27.5082,7.4095 27.811,7.4389 28.1009,7.5919 28.3782,7.8622 28.6434,8.2436 28.897,8.7289 29.1391,9.3117 29.3705,9.9866 29.5914,10.746 29.8025,11.5843 30.0038,12.4942 30.1959,13.4695 30.3792,14.5047 30.554,15.5915 30.7211,16.7254 30.8809,17.8987 31.0334,19.1055 31.1792,20.3387 31.3186,21.5923 31.4523,22.8601 31.5807,24.1355 31.7039,25.4116 31.8227,26.6825 31.9373,27.9413 32.0481,29.1818 32.1555,30.3977 32.26,31.5821 32.3622,32.7287 32.4623,33.8314 32.5607,34.8832 32.6577,35.878 32.7541,36.809 32.8501,37.6701 32.9535,38.5773 33.0575,39.5183 33.162,40.4857 33.2674,41.4735 33.3736,42.4744 33.4814,43.4823 33.5907,44.4902 33.7016,45.4922 33.8144,46.48 33.9295,47.4484 34.0471,48.3901 34.1672,49.2987 34.2902,50.1671 34.4164,50.9887 34.5457,51.7574 34.6785,52.4656 34.8151,53.1072 34.9556,53.6756 35.1004,54.1643 35.2497,54.5661 37.2968,58.9458 37.1103,58.4435 36.9294,57.833 36.7537,57.1225 36.583,56.3202 36.4168,55.4348 36.2552,54.474 36.0976,53.4468 35.9439,52.3617 35.7939,51.2258 35.6469,50.049 35.5031,48.8383 35.3619,47.6034 35.2232,46.3512 35.0866,45.0914 34.952,43.8312 34.819,42.58 34.6873,41.3454 34.5565,40.1361 34.4267,38.9601 34.2976,37.8262 34.1775,36.7495 34.0572,35.5855 33.9356,34.3416 33.8127,33.0267 33.6876,31.6489 33.5602,30.2153 33.4294,28.735 33.295,27.2152 33.1565,25.665 33.0132,24.0912 32.8648,22.5026 32.7107,20.9077 32.5502,19.3136 32.3831,17.7291 32.2088,16.1615 32.0266,14.6203 31.836,13.1113 31.6365,11.6452 31.4275,10.2275 31.2089,8.869 30.9797,7.5753 30.7395,6.3559 30.4879,5.2186 30.2242,4.1706 29.9481,3.2212 29.6587,2.3781 29.356,1.6492 29.0392,1.0425 28.7077,0.5659 28.3609,0.2281 27.9986,0.0363 27.6202,0 27.1258,0.225 26.6575,0.7729 26.2132,1.6219 25.7921,2.7505 25.3928,4.1367 25.0141,5.7586 24.6548,7.5957 24.3139,9.6253 23.9898,11.8255 23.6812,14.1759 23.3874,16.6537 23.1069,19.2378 22.8382,21.9059 22.5802,24.6374 22.3321,27.4097 22.092,30.2018 21.8591,32.9911 21.6319,35.7565 21.4095,38.4765 21.1904,41.1298 20.9735,43.6941 20.7575,46.1473 20.5414,48.4687 20.3235,50.636 20.1028,52.6279 19.8782,54.4228 19.6482,55.9983 19.412,57.3339 19.168,58.4069" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000094908" name="MAVS" refUnificationXrefID="ref878;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m68199">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="252.0" y="548.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="24.0" outlineColor="0 0 0 0" width="24.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_27af0a" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#27af0a;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_27af0a);stroke:none;" d="M 59.9992 48.5408 c -4.8875 -0.5772 -6.444 -4.509 -4.4684 -8.7121 l -5.1097 -15.2681 c -2.3994 -10.3754 10.5012 -2.7373 9.578 -13.1018 c -2.0877 4.2424 -6.5002 4.4351 -10.0928 1.3497 l -16.847 -0.0964 c -11.1166 -1.0359 0.5075 -10.3444 -10.1418 -12.7122 c 3.5976 3.1992 2.4265 7.2499 -1.7691 9.5461 l -5.3024 15.2088 c -4.4714 9.7352 -10.1876 -3.6557 -15.8461 5.2451 c 4.3108 -2.2652 8.0001 0.0455 8.9994 4.5501 l 13.5703 9.4959 c 8.3535 7.0524 -6.8039 8.085 0.3484 15.954 c -0.9331 -4.5992 2.5176 -7.2219 7.3313 -6.7338 l 13.6892 -9.3399 c 9.6339 -5.3764 5.9824 8.6524 16.0614 4.6148 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e64" name="DDX58:dsRNA:MAVS" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m64">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="351.5" y="531.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="34.78436410350523" outlineColor="0 0 0 0" resourceID="30" width="24.928794274178756"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
</csml:entity>
<csml:entity id="MO000016573" name="MyD88" refUnificationXrefID="ref879;ref880;ref881;ref882;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m1572">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="918.0" y="762.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="28.0" outlineColor="0 0 0 0" width="28.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_d14d35" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#d14d35;stop-opacity:1;" offset="2%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 45.6589 40.7351 c -12.8034 -17.2246 -3.4958 -15.396 14.3411 -6.9145 c -5.6247 -21.6076 15.286 -16.8559 -23.1584 -3.4266 l 8.8172 -14.5467 c -20.2529 6.9178 -15.6471 -1.4149 -2.1102 -15.8473 c -22.1809 -1.2997 -11.2242 -19.8223 -10.3989 21.0812 l -11.038 -12.9242 c 0.2862 21.4997 -6.1744 14.5214 -15.6455 -2.8798 c -8.0838 20.8041 -22.2224 4.6053 16.7319 16.4554 l -15.639 6.5589 c 20.4302 6.3701 11.8309 10.3902 -7.5593 14.0677 c 17.1848 14.1568 -2.5103 22.6686 20.7392 -10.9109 l 1.3726 16.9777 c 12.3399 -17.563 13.4865 -8.0998 10.9738 11.5738 c 18.7046 -12.0544 20.6709 9.4044 -3.9138 -23.1991 l 16.4871 3.9342 z" style="fill:url(#MO_d14d35);stroke:none;"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e65" name="TLr9:CpG DNA:MyD88" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m65">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="733.5" y="621.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="30.523031748944756" outlineColor="0 0 0 0" resourceID="30" width="21.87483942007708"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_"/>
</csml:entity>
<csml:entity id="e66" name="ssRNA:TLR8:MyD88" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m66">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="754.5" y="494.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="27.594053954854104" outlineColor="0 0 0 0" resourceID="30" width="19.77573866764544"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Extracellular"/>
</csml:entity>
<csml:entity id="e67" name="ssRNA:TLR7:MyD88" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m67">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="790.5" y="434.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="27.594053954854104" outlineColor="0 0 0 0" resourceID="30" width="19.77573866764544"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Extracellular"/>
</csml:entity>
<csml:entity id="e68" name="IFIH1:dsRNA:MAVS" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m68">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="440.5" y="588.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="31.293815378968624" outlineColor="0 0 0 0" resourceID="30" width="22.427234354927517"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
</csml:entity>
<csml:entity id="MO000041125" name="TRIF" refUnificationXrefID="ref883;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m18998">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="745.0" y="253.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_59ab14" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#59ab14;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_59ab14);stroke:none;" d="M 60 48.5415 c 0.8103 -7.397 2.3214 -19.8066 -3.5398 -20.1631 c 9.5776 -10.3066 -2.5463 -7.5712 3.5398 -16.9193 c -7.1467 -3.0187 -19.0893 -8.2203 -21.2568 -3.0292 c -7.3468 -11.8479 -8.3579 -0.0366 -15.8253 -8.4299 c -5.2269 5.5315 -14.1193 14.7258 -9.5978 18.2907 c -14.118 2.984 -2.6193 7.5483 -13.3201 11.7096 c 3.9166 6.4373 10.3631 17.3217 15.3246 14.3334 c -1.3787 13.6923 6.7392 4.7019 7.5932 15.6663 c 7.6473 -1.5531 20.5241 -4.0206 19.0691 -9.4324 c 13.2666 5.4782 6.7842 -4.643 18.013 -2.0267 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000041437" name="dsRNA:TLR3:TRIF" refUnificationXrefID="ref884;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m19305">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="715.0" y="355.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="26.0" outlineColor="0 0 0 0" width="26.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_691efd" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#691efd;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_691efd);stroke:none;" d="M 42.8569 21.4287 l -11.0484 -2.6811 c -6.6359 0.3715 -2.1771 -4.7686 -4.9863 -4.9289 l -22.892 -4.1994 c -6.4261 1.4042 1.1176 -4.673 -3.9301 -9.6193 l 2.8433 9.6271 c 3.6895 4.7911 -3.68 4.0171 -2.4359 6.2041 l 7.2466 19.2686 c 4.6174 4.1174 -5.2319 1.4984 -7.6541 7.7574 l 8.2054 -6.9459 c 2.9464 -5.1626 5.8571 0.7515 7.4218 -1.2752 l 15.6454 -15.0695 c 1.8087 -5.5216 4.1143 3.1746 11.5845 1.8619 z" /&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_933f3f" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#933f3f;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_933f3f);stroke:none;" d="M 60 51.8143 l -0.2694 -8.4343 c 9.7524 -8.9191 19.0194 10.5739 0.2694 -18.0526 l -8.5176 -2.3624 c -5.9049 -11.5771 16.4508 -13.9363 -17.9694 -5.822 l -4.995 6.9739 c -13.4022 1.7636 -8.852 -19.1866 -11.3752 14.4546 l 5.4304 6.6732 c -2.3777 12.6672 -21.9218 2.0779 10.9392 14.7554 l 8.351 -2.8499 c 11.9324 6.0654 -4.6964 20.4711 18.1359 -5.3346 z" /&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_59ab14" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#59ab14;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_59ab14);stroke:none;" d="M 42.8571 51.8154 c 0.5788 -5.2836 1.6581 -14.1476 -2.5284 -14.4022 c 6.8411 -7.3619 -1.8188 -5.408 2.5284 -12.0852 c -5.1048 -2.1562 -13.6352 -5.8716 -15.1834 -2.1637 c -5.2477 -8.4628 -5.9699 -0.0261 -11.3038 -6.0214 c -3.7335 3.9511 -10.0852 10.5184 -6.8556 13.0648 c -10.0843 2.1314 -1.8709 5.3916 -9.5144 8.364 c 2.7976 4.5981 7.4022 12.3726 10.9461 10.2381 c -0.9848 9.7802 4.8137 3.3585 5.4237 11.1902 c 5.4624 -1.1094 14.6601 -2.8719 13.6208 -6.7374 c 9.4761 3.913 4.8459 -3.3164 12.8664 -1.4476 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e69" name="Atg5:Atg12" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m69">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="284.5" y="857.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="29.31511414764206" outlineColor="0 0 0 0" resourceID="12" width="23.940676553907682"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
</csml:entity>
<csml:entity id="e70" name="Atg5:Atg12:DDX58:dsRNA:MAVS" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m70">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="398.0" y="823.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="33.970588235294116" outlineColor="0 0 0 0" resourceID="31" width="20.382352941176475"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
</csml:entity>
</csml:entitySet>
<csml:processSet>
<csml:process id="p1" name="p1" type="cso30:c:ProcessBiological">
<csml:connector id="c1" name="c1" refID="MO000019398" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="880.0" y="383.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="880.0 383.0 947.0007110163103 383.8933428135508" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="947.0407074612287 380.8936094446672 946.9607145713918 386.89307618243447 955.0 384.00000000000006" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c2" name="c2" refID="MO000022224" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="980.0" y="384.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="1051.0 384.0 980.0 384.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="980.0 387.0 980.0 381.0 972.0 384.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c3" name="c3" refID="MO000041446" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="904.7639112242477" y="390.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="955.0 390.0 904.7639112242477 421.72805606889614" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="906.3658901984116 424.26452277798904 903.1619322500837 419.19158935980323 897.9999999999999 426.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="955.0" y="375.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="17.0" outlineColor="0 0 0 0" resourceID="10005" width="17.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,12524386
As for RNA recognition, TLR3 and TLR7/8 detect double-stranded RNA (ds-RNA) and single-stranded RNA (ss-RNA), respectively</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p2" name="p1" type="cso30:c:ProcessBiological">
<csml:connector id="c4" name="c4" refID="MO000042126" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="909.0" y="480.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="909.0 480.0 947.0018896894087 480.8261280367263" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="947.0670916756363 477.8268366702545 946.9366877031811 483.825419403198 955.0 481.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c5" name="c5" refID="e12" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="981.9990818844292" y="480.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="1040.0 480.0 981.9990818844292 480.87880178962985" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="982.044531213318 483.87845749629076 981.9536325555404 477.8791460829689 974.0 480.99999999999994" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c6" name="c6" refID="e13" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="922.9619305082008" y="490.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="955.0 490.0 922.9619305082008 518.6656411242413" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="924.9623150866103 520.9013650648167 920.9615459297913 516.429917183666 917.0 524.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="955.0" y="471.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,12524386
As for RNA recognition, TLR3 and TLR7/8 detect double-stranded RNA (ds-RNA) and single-stranded RNA (ss-RNA), respectively</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p3" name="p1" type="cso30:c:ProcessBiological">
<csml:connector id="c7" name="c7" refID="MO000042007" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="913.0" y="580.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="913.0 580.0 946.0 580.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="946.0 577.0 946.0 583.0 954.0 580.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c8" name="c8" refID="e12" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="978.54774877087" y="491.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="1050.0 491.0 978.54774877087 565.236105173122" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="980.7092093309493 567.3165109621983 976.3862882107909 563.1556993840458 973.0000000000001 571.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c9" name="c9" refID="e14" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="893.1554175279994" y="585.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="954.0 585.0 893.1554175279994 615.4222912360003" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="894.4970583144992 618.105572809 891.8137767414995 612.7390096630005 886.0 618.9999999999999" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="954.0" y="570.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,12524386
As for RNA recognition, TLR3 and TLR7/8 detect double-stranded RNA (ds-RNA) and single-stranded RNA (ss-RNA), respectively</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p4" name="p4" type="cso30:c:ProcessBiological">
<csml:connector id="c10" name="c10" refID="MO000042012" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="861.0" y="660.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="861.0 660.0 914.0 660.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="914.0 657.0 914.0 663.0 922.0 660.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c11" name="c11" refID="e16" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="949.0" y="660.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="1037.0 660.0 949.0 660.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="949.0 663.0 949.0 657.0 941.0 660.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c12" name="c12" refID="e17" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="788.8467785250012" y="662.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="922.0 662.0 788.8467785250012 688.4417744773048" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="789.4311130960119 691.3843164241803 788.2624439539904 685.4992325304294 780.9999999999999 690.0000000000001" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="922.0" y="650.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
On the other hand, TLR9 recognizes specific DNA sequences that contain unmethylated CpG motifs, which are commonly found in the genomes of infectious bacteria and viruses.</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p5" name="p5" type="cso30:c:ProcessBiological">
<csml:connector id="c13" name="c13" refID="MO000066987" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="336.0" y="313.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="336.0 381.0 336.0 313.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="333.0 313.0 339.0 313.0 336.0 305.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c14" name="c14" refID="e15" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="352.98833818622006" y="292.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="419.0 292.0 352.98833818622006 295.56819793588" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="353.1502639602651 298.5638247557125 352.8264124121751 292.57257111604747 345.0 296.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c15" name="c15" refID="e18" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="344.0" y="305.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="344.0 305.0 381.6620134273181 347.0413173142155" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="383.89651943448723 345.0395723494598 379.42750742014886 349.0430622789712 387.0 352.99999999999994" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="326.0" y="286.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figure1</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p6" name="p6" type="cso30:c:ProcessBiological">
<csml:connector id="c16" name="c16" refID="e20" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="134.0" y="936.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="134.0 936.0 514.0 936.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="514.0 933.0 514.0 939.0 522.0 936.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c17" name="c17" refID="e19" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="533.0" y="945.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="533.0 945.0 540.6848081015571 991.1088486093429" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="543.6439898730536 990.6156516474268 537.7256263300607 991.6020455712589 542.0 999.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="522.0" y="926.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10068" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,15659550
PKZ is constitutively expressed at low levels and is highly induced in response to stimulation with poly(rI:rC), which mimics viral ds-RNA </csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p8" name="p8" type="cso30:c:ProcessBiological">
<csml:connector id="c18" name="c18" refID="e22" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="298.0" y="624.6554714273235"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="298.0 706.0 322.6775536119356 624.6554714273235" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="319.80675182668926 623.7845540317993 325.54835539718187 625.5263888228476 325.0 617.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c19" name="c19" refID="e21" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="344.51298281696256" y="545.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="501.0 545.0 344.51298281696256 602.2513477498917" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="345.54372741075315 605.0687163062527 343.482238223172 599.4339791935307 337.0 605.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c20" name="c20" refID="e23" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="335.0" y="617.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="335.0 617.0 371.9143419771112 661.8245581150636" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="374.2301326839623 659.9174363564803 369.59855127026003 663.7316798736468 377.0 668.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="318.0" y="598.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10128" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_DNABinding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,11524677,10364558
Further study by Rich's group provided a structural basis of the Zalpha domain of DLM-1 or ADAR1 to interact with characteristic features of the left-handed helical Z-DNA backbone</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p7" name="p8" type="cso30:c:ProcessBiological">
<csml:connector id="c21" name="c21" refID="e22" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="296.0" y="509.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="296.0 706.0 296.0 509.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="293.0 509.0 299.0 509.0 296.0 501.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c22" name="c22" refID="e24" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="296.0" y="445.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="296.0 445.0 296.0 474.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="299.0 474.0 293.0 474.0 296.0 482.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c23" name="c23" refID="e25" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="305.0" y="492.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="305.0 492.0 386.0 492.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="386.0 489.0 386.0 495.0 394.0 492.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="286.0" y="482.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10128" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_DNABinding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,11524677,10364558
Further study by Rich's group provided a structural basis of the Zalpha domain of DLM-1 or ADAR1 to interact with characteristic features of the left-handed helical Z-DNA backbone</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p9" name="p9" type="cso30:c:ProcessBiological">
<csml:connector id="c25" name="c25" refID="e26" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="505.0" y="432.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="573.0 432.0 505.0 432.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="505.0 435.0 505.0 429.0 497.0 432.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c24" name="c24" refID="e21" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="491.9807861400872" y="448.75090228729783"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="513.0 531.0 491.9807861400872 448.75090228729783" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="489.07419778235055 449.49369708983056 494.8873744978239 448.00810748476516 490.0 441.00000000000006" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c26" name="c26" refID="e27" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="496.0" y="441.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="496.0 441.0 530.6850892893607 480.02072545053073" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="532.9273172454117 478.027633934041 528.4428613333098 482.0138169670205 536.0000000000001 486.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="478.0" y="422.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
It is quite interesting to presume that these bacterial proteins such as SmtB and MarR might interact with DAI (DLM-1/ZBP1) or ADARs through the Zbeta domain.</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p10" name="p9" type="cso30:c:ProcessBiological">
<csml:connector id="c27" name="c27" refID="e21" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="498.622181616751" y="549.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="513.0 549.0 498.622181616751 590.441947104659" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="501.45645145250387 591.4252652109407 495.78791178099806 589.4586289983774 496.0 598.0000000000001" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c28" name="c28" refID="e28" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="509.0" y="608.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="561.0 608.0 509.0 608.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="509.0 611.0 509.0 605.0 501.0 608.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c29" name="c29" refID="e29" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="492.0" y="617.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="492.0 617.0 492.0 652.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="495.0 652.0 489.0 652.0 492.0 660.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="482.0" y="598.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
It is quite interesting to presume that these bacterial proteins such as SmtB and MarR might interact with DAI (DLM-1/ZBP1) or ADARs through the Zbeta domain.</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p11" name="p9" type="cso30:c:ProcessBiological">
<csml:connector id="c30" name="c30" refID="e26" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="588.0" y="434.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="588.0 434.0 642.2537814103251 448.0009758478258" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="643.0034154673905 445.09614387669774 641.5041473532599 450.90580781895386 650.0 449.99999999999994" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c31" name="c31" refID="e30" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="619.0" y="390.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="619.0 390.0 648.6220050961384 435.30424308821165" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="651.132913938059 433.6624949992635 646.1110962542177 436.9459911771597 653.0 442.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c32" name="c32" refID="e31" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="660.0" y="461.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="660.0 461.0 660.0 505.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="663.0 505.0 657.0 505.0 660.0 513.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="650.0" y="442.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
It is quite interesting to presume that these bacterial proteins such as SmtB and MarR might interact with DAI (DLM-1/ZBP1) or ADARs through the Zbeta domain.</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p12" name="p9" type="cso30:c:ProcessBiological">
<csml:connector id="c33" name="c33" refID="e28" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="576.0" y="571.1754418849364"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="576.0 599.0 598.9143419771112 571.1754418849364" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="596.59855127026 569.268320126353 601.2301326839623 573.0825636435196 604.0 565.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c34" name="c34" refID="e30" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="612.0" y="390.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="612.0 390.0 612.0 538.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="615.0 538.0 609.0 538.0 612.0 546.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c35" name="c35" refID="e32" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="614.0" y="565.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="614.0 565.0 630.0847608999946 630.2326414277561" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="632.9975203645861 629.5144267652541 627.1720014354031 630.9508560902582 632.0 638.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="602.0" y="546.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
It is quite interesting to presume that these bacterial proteins such as SmtB and MarR might interact with DAI (DLM-1/ZBP1) or ADARs through the Zbeta domain.</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p13" name="p13" type="cso30:c:ProcessBiological">
<csml:connector id="c36" name="c36" refID="e30" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="612.0" y="313.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="612.0 371.0 612.0 313.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="609.0 313.0 615.0 313.0 612.0 305.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c37" name="c37" refID="e15" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="437.0" y="292.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="437.0 292.0 594.0023497448831 295.8061175695729" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="594.0750556562932 292.8069987239041 593.9296438334729 298.8052364152418 602.0 296.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c38" name="c38" refID="e33" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="621.0" y="283.90294983503406"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="621.0 294.0 662.2296215069442 283.90294983503406" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="661.5160153188065 280.98905790013816 662.943227695082 286.81684176993 670.0 282.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="602.0" y="286.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
ADARs bind to ds-RNA through its ds-RNA-binding domains to deaminate adenosine (A) to inosine (I) for RNA editing. </csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p14" name="p5" type="cso30:c:ProcessBiological">
<csml:connector id="c39" name="c39" refID="e15" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="436.0" y="301.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="436.0 301.0 457.54865177664925 324.1448482045492" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="459.7443336999433 322.10059262079267 455.3529698533552 326.1891037883057 463.0 330.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c40" name="c40" refID="MO000103999" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="489.0" y="340.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="527.0 340.0 489.0 340.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="489.0 343.0 489.0 337.0 481.0 340.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c41" name="c41" refID="e34" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="476.0" y="349.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="476.0 349.0 487.84864561136663 376.64683975985554" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="490.6060807014208 375.465081864118 485.09121052131246 377.828597655593 491.0 384.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="462.0" y="330.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figure1</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p15" name="p5" type="cso30:c:ProcessBiological">
<csml:connector id="c42" name="c42" refID="e35" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="274.0" y="282.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="274.0 282.0 280.43107091889453 314.1553545944726" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="283.37281294596727 313.5670061890581 277.48932889182174 314.7437029998872 282.0 322.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c43" name="c43" refID="MO000066987" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="297.2680368629481" y="347.020613557655"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="327.0 381.0 297.2680368629481 347.020613557655" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="295.0103067788275 348.9961273812606 299.52576694706875 345.0450997340495 292.0 341.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c44" name="c44" refID="e36" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="267.77777130012333" y="341.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="279.0 341.0 267.77777130012333 361.9481602397697" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="270.4222112102097 363.364824477316 265.13333139003703 360.5314960022235 264.0 369.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="274.0" y="322.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figure1</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p16" name="p16" type="cso30:c:ProcessBiological">
<csml:connector id="c46" name="c46" refID="MO000016665" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="701.9995375588886" y="916.0860165328912"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="1066.0 920.0 701.9995375588886 916.0860165328912" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="701.9672813590544 919.0858431174745 702.0317937587229 913.0861899483081 694.0 916.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c45" name="c45" refID="e37" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="653.8500704975418" y="926.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="678.0 926.0 653.8500704975418 969.9873715937632" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="656.4798061498806 971.4311480303413 651.220334845203 968.543595157185 650.0 976.9999999999999" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="673.0" y="905.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10068" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,10564822
Further study revealed that DLM-1 is upregulated not only in tumor stromal cells but also in macrophages upon stimulation with type II IFN (IFN-gamma).
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p17" name="p17" type="cso30:c:ProcessBiological">
<csml:connector id="c47" name="c47" refID="e38" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="749.999386626541" y="984.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="1065.0 984.0 749.999386626541 987.9009363885258" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="750.0365354808438 990.9007063734787 749.9622377722382 984.901166403573 742.0 988.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c48" name="c48" refID="e37" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="672.0" y="988.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="721.0 988.0 672.0 988.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="672.0 991.0 672.0 985.0 664.0 988.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="721.0" y="977.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10068" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,17618271
This gene can also be induced by treatment with type I IFNs (IFN-alpha/beta)</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p18" name="p17" type="cso30:c:ProcessBiological">
<csml:connector id="c49" name="c49" refID="MO000016660" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="754.0" y="1052.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="1063.0 1052.0 754.0 1052.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="754.0 1055.0 754.0 1049.0 746.0 1052.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c50" name="c50" refID="e37" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="666.5775375331502" y="1003.5536798306425"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="725.0 1044.0 666.5775375331502 1003.5536798306425" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="664.8699075966593 1006.0202564055738 668.2851674696412 1001.0871032557112 660.0 999.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="725.0" y="1041.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10068" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,17618271
This gene can also be induced by treatment with type I IFNs (IFN-alpha/beta)</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p19" name="p19" type="cso30:c:ProcessBiological">
<csml:connector id="c51" name="c51" refID="e44" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="572.0" y="783.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="572.0 783.0 578.5857417018136 910.010732820691" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="581.5817168940545 909.8553859588711 575.5897665095728 910.1660796825109 579.0 918.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c52" name="c52" refID="e37" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="589.0" y="936.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="589.0 936.0 626.2100996402669 971.4793973314173" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="628.2803256409854 969.3081846965174 624.1398736395485 973.6506099663172 632.0 977.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="570.0" y="918.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10068" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,16413926,10564822
DAI (DLM-1/ZBP1) mRNA expression is also regulated by signaling triggered by PAMPs such as B-form DNA (B-DNA), IFN-stimulatory DNA (ISD) and lipopolysaccharides (LPS)</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p20" name="p19" type="cso30:c:ProcessBiological">
<csml:connector id="c53" name="c53" refID="e43" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="728.4306105334065" y="875.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="904.0 875.0 728.4306105334065 945.0358766724663" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="729.5421567812316 947.8223556224938 727.3190642855814 942.249397722439 721.0 948.0000000000001" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c54" name="c54" refID="e37" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="671.0793457790559" y="957.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="702.0 957.0 671.0793457790559 973.2740285373391" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="672.4765850775538 975.9287832044851 669.682106480558 970.6192738701932 664.0 977.0000000000001" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="702.0" y="942.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10068" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,16413926,10564822
DAI (DLM-1/ZBP1) mRNA expression is also regulated by signaling triggered by PAMPs such as B-form DNA (B-DNA), IFN-stimulatory DNA (ISD) and lipopolysaccharides (LPS)</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p21" name="p19" type="cso30:c:ProcessBiological">
<csml:connector id="c55" name="c55" refID="MO000042409" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="752.9993509654379" y="1104.1019025600692"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="1059.0 1108.0 752.9993509654379 1104.1019025600692" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="752.9611375054119 1107.1016591721084 753.0375644254639 1101.10214594803 745.0 1104.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c56" name="c56" refID="e37" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="657.9571543086322" y="1005.2790621242674"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="728.0 1094.0 657.9571543086322 1005.2790621242674" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="655.6025060120319 1007.1379949900045 660.3118026052324 1003.4201292585303 653.0 999.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="726.0" y="1094.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10068" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,16413926,10564822
DAI (DLM-1/ZBP1) mRNA expression is also regulated by signaling triggered by PAMPs such as B-form DNA (B-DNA), IFN-stimulatory DNA (ISD) and lipopolysaccharides (LPS)</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p22" name="p22" type="cso30:c:ProcessBiological">
<csml:connector id="c57" name="c57" refID="e10" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="360.0" y="1266.8717032516947"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="360.0 1395.0 478.5664835581332 1266.8717032516947" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="476.3645948387477 1264.8341345859947 480.7683722775188 1268.9092719173948 484.00000000000006 1261.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c58" name="c58" refID="e42" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="501.0" y="1210.981966459253"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="501.0 1245.0 543.7406062435026 1210.981966459253" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="541.8723688212827 1208.6346938005665 545.6088436657225 1213.3292391179396 550.0 1206.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="482.0" y="1242.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10068" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,12359878,3295042,16413926
Type I IFN activation can be evoked by intracellular infection by several bacteria, including L. monocytogenes,S. flexneri, enterophathogenic E. coli and L. pneumophila </csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p23" name="p22" type="cso30:c:ProcessBiological">
<csml:connector id="c59" name="c59" refID="e39" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="388.0" y="1303.4795369723442"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="388.0 1471.0 509.30792150278523 1303.4795369723442" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="506.8780951381562 1301.7200075358887 511.7377478674143 1305.2390664087998 514.0 1297.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c60" name="c60" refID="e42" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="525.0" y="1213.194942833106"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="525.0 1278.0 556.5024583450179 1213.194942833106" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="553.8043547826031 1211.8833647124877 559.2005619074328 1214.5065209537242 560.0 1206.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="510.0" y="1278.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10068" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,12359878,3295042,16413926
Type I IFN activation can be evoked by intracellular infection by several bacteria, including L. monocytogenes,S. flexneri, enterophathogenic E. coli and L. pneumophila </csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p24" name="p22" type="cso30:c:ProcessBiological">
<csml:connector id="c61" name="c61" refID="e40" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="457.0" y="1344.072975806437"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="457.0 1530.0 555.2619506100697 1344.072975806437" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="552.6095846826558 1342.671207285213 557.9143165374835 1345.4747443276608 559.0 1337.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c62" name="c62" refID="e42" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="564.0" y="1213.9987247947636"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="564.0 1318.0 565.8571656286649 1213.9987247947636" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="562.8576438306286 1213.945161905513 568.8566874267012 1214.0522876840143 566.0 1206.0000000000002" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="554.0" y="1318.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10068" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,12359878,3295042,16413926
Type I IFN activation can be evoked by intracellular infection by several bacteria, including L. monocytogenes,S. flexneri, enterophathogenic E. coli and L. pneumophila </csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p25" name="p22" type="cso30:c:ProcessBiological">
<csml:connector id="c63" name="c63" refID="e41" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="620.0" y="1341.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="620.0 1518.0 620.0 1341.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="617.0 1341.0 623.0 1341.0 620.0 1333.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c64" name="c64" refID="e42" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="574.0769230769231" y="1213.3846153846155"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="616.0 1314.0 574.0769230769231 1213.3846153846155" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="571.3076923076924 1214.5384615384617 576.8461538461539 1212.2307692307693 571.0000000000001 1206.0000000000002" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="610.0" y="1314.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10068" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,12359878,3295042,16413926
Type I IFN activation can be evoked by intracellular infection by several bacteria, including L. monocytogenes,S. flexneri, enterophathogenic E. coli and L. pneumophila </csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p26" name="p26" type="cso30:c:ProcessBiological">
<csml:connector id="c65" name="c65" refID="e15" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="428.0" y="301.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="428.0 301.0 428.0 694.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="431.0 694.0 425.0 694.0 428.0 702.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c66" name="c66" refID="e45" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="359.0" y="722.0816153065192"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="359.0 753.0 411.11956276901043 722.0816153065192" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="409.5889570290657 719.5014513448981 412.6501685089551 724.6617792681403 418.0 718.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c67" name="c67" refID="e46" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="430.0" y="721.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="430.0 721.0 441.95687101730374 766.2652974226498" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="444.85738448381005 765.4991240541387 439.0563575507975 767.0314707911609 444.0 774.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="418.0" y="702.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
E3L also contains a double-stranded RNA binding domain at the C-terminus. </csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p27" name="p27" type="cso30:c:ProcessBiological">
<csml:connector id="c68" name="c68" refID="e44" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="572.0" y="730.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="572.0 770.0 572.0 730.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="569.0 730.0 575.0 730.0 572.0 722.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c69" name="c69" refID="e21" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="519.0" y="549.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="519.0 549.0 565.5454414101501 693.3858590682208" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="568.4007442595673 692.4653995970272 562.690138560733 694.3063185394145 568.0 701.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c70" name="c70" refID="e47" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="582.0" y="712.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="582.0 712.0 654.0 712.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="654.0 709.0 654.0 715.0 662.0 712.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="561.0" y="701.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10128" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_DNABinding" refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p28" name="p28" type="cso30:c:ProcessBiological">
<csml:connector id="c71" name="c71" refID="MO000019331" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="707.5003060050375" y="748.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="793.0 748.0 707.5003060050375 809.3367369963862" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="709.2490296313927 811.7743517482753 705.7515823786823 806.8991222444972 701.0 814.0000000000001" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c72" name="c72" refID="MO000007694" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="661.0" y="780.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="661.0 780.0 679.1325476507429 803.6511491096646" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="681.5133667346187 801.8258544786933 676.7517285668672 805.4764437406361 684.0 810.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c73" name="c73" refID="e47" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="692.0" y="721.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="692.0 721.0 692.0 802.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="695.0 802.0 689.0 802.0 692.0 810.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c74" name="c74" refID="e48" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="701.0" y="820.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="701.0 820.0 847.0 820.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="847.0 817.0 847.0 823.0 855.0 820.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="682.0" y="810.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,16286919
IRF-3 is activated by B-DNA through the TBK1- and IKKi-dependent signaling pathway

PMID: 18280611
Figue 2

PMID: 18280611,17618271
Moreover, DAI (DLM-1/ZBP1) associates with both TBK1 and IRF-3 in a ligand-dependent manner  </csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p29" name="p29" type="cso30:c:ProcessBiological">
<csml:connector id="c75" name="c75" refID="e48" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="847.0459984420344" y="835.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="858.0 835.0 847.0459984420344 861.6025752122023" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="849.8200327374585 862.7448246279652 844.2719641466102 860.4603257964394 844.0 869.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c76" name="c76" refID="MO000041456" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="843.0" y="890.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="843.0 890.0 858.7695184410884 944.317230185971" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="861.6505571213493 943.4807996013791 855.8884797608275 945.1536607705629 861.0 952.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c77" name="c77" refID="e47" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="704.3023375084848" y="726.9904271088225"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="830.0 869.0 704.3023375084848 726.9904271088225" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="702.0559273426763 728.9788036745043 706.5487476742932 725.0020505431407 699.0 721.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c78" name="c78" refID="MO000019331" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="808.9711902327327" y="758.753348248749"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="837.0 869.0 808.9711902327327 758.753348248749" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="806.0636846394518 759.4925445860239 811.8786958260135 758.0141519114743 806.9999999999999 751.0000000000001" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="829.0" y="869.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10001" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Phosphorylation" refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figue 2
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p30" name="p30" type="cso30:c:ProcessBiological">
<csml:connector id="c81" name="c81" refID="MO000088437" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="861.8207152494824" y="1172.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="891.0 1172.0 861.8207152494824 1199.511897050488" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="863.8787538555495 1201.694665269044 859.7626766434155 1197.3291288319322 856.0 1205.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c82" name="c82" refID="e49" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="752.9178268547516" y="1216.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="835.0 1216.0 752.9178268547516 1227.8563138987581" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="753.3467091427174 1230.82549896929 752.4889445667859 1224.8871288282264 745.0 1229.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="835.0" y="1203.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10027" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translocation" refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figue 2
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p31" name="p31" type="cso30:c:ProcessBiological">
<csml:connector id="c79" name="c79" refID="MO000041456" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="864.0" y="976.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="864.0 976.0 864.0 1013.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="867.0 1013.0 861.0 1013.0 864.0 1021.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c80" name="c80" refID="MO000088437" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="868.0" y="1042.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="868.0 1042.0 901.0001627471723 1123.5837356805096" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="903.7812618669813 1122.4587967106993 898.2190636273634 1124.70867465032 903.9999999999999 1131.0000000000002" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="853.0" y="1021.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10017" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Dimerization" refCellComponentID="cso30:i:CC_Cytoplasm"/>
</csml:process>
<csml:process id="p32" name="p32" type="cso30:c:ProcessBiological">
<csml:connector id="c83" name="c83" refID="e49" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="634.9001992461299" y="1180.0481168910628"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" points="703.0 1220.0 634.9001992461299 1180.0481168910628" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="633.3821554119813 1182.6356916083616 636.4182430802784 1177.4605421737642 628.0 1176.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c84" name="c84" refID="e63" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="552.0363475688873" y="1133.806548684808"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="606.0 1163.0 552.0363475688873 1133.806548684808" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="550.6088918120844 1136.4451790231408 553.4638033256903 1131.1679183464753 545.0 1130.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="606.0" y="1158.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="22.0" outlineColor="0 0 0 0" resourceID="10068" width="22.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figue 2
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p33" name="p32" type="cso30:c:ProcessBiological">
<csml:connector id="c85" name="c85" refID="e49" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="675.3599068047633" y="1157.7075489304052"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" points="710.0 1211.0 675.3599068047633 1157.7075489304052" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="672.8445759558614 1159.3425139821913 677.8752376536652 1156.0725838786188 671.0 1151.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c86" name="c86" refID="G010228" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="624.8255999415425" y="1103.48291759204"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="653.0 1130.0 624.8255999415425 1103.48291759204" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="622.7695058445275 1105.6675175701184 626.8816940385575 1101.2983176139617 619.0000000000001 1098.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="653.0" y="1129.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="22.0" outlineColor="0 0 0 0" resourceID="10068" width="22.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figue 2
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p34" name="p34" type="cso30:c:ProcessBiological">
<csml:connector id="c87" name="c87" refID="e18" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="396.0" y="376.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="396.0 376.0 396.0 413.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="399.0 413.0 393.0 413.0 396.0 421.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c88" name="c88" refID="MO000094908" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="276.0" y="447.55114592832746"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="276.0 548.0 380.23937686683 447.55114592832746" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="378.1576971437072 445.3909122533887 382.3210565899528 449.7113796032662 386.0 442.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c89" name="c89" refID="e64" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="371.0828999980854" y="442.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="393.0 442.0 371.0828999980854 523.2759125070999" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="373.97943280792293 524.0570000063819 368.18636718824786 522.4948250078179 369.0 531.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="385.0" y="421.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10005" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figure 1
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p35" name="p35" type="cso30:c:ProcessBiological">
<csml:connector id="c90" name="c90" refID="e17" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="781.0" y="695.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="781.0 695.0 850.3078084188734 714.802230976821" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="851.1319718025655 711.9176591338985 849.4836450351813 717.6868028197434 858.0 717.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c91" name="c91" refID="MO000016573" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="883.0115218004042" y="733.2784093857208"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="918.0 764.0 883.0115218004042 733.2784093857208" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="881.0321182807589 735.5327300608724 884.9909253200495 731.0240887105692 877.0 728.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c92" name="c92" refID="e65" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="761.6464582024041" y="648.4524817084066"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="858.0 713.0 761.6464582024041 648.4524817084066" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="759.9767775617516 650.9449035343081 763.3161388430566 645.960059882505 755.0 643.9999999999999" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="858.0" y="710.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figue 1
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p36" name="p35" type="cso30:c:ProcessBiological">
<csml:connector id="c93" name="c93" refID="MO000016573" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="801.2831019843318" y="627.0073982241191"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="920.0 762.0 801.2831019843318 627.0073982241191" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="799.0303276502871 628.9885614682436 803.5358763183764 625.0262349799948 796.0 621.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c94" name="c94" refID="e14" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="804.9195959492894" y="614.1313708498985"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="867.0 623.0 804.9195959492894 614.1313708498985" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="804.4953318805774 617.101219330882 805.3438600180012 611.161522368915 797.0 613.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c95" name="c95" refID="e66" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="768.8485794463671" y="529.7834924057565"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="786.0 602.0 768.8485794463671 529.7834924057565" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="765.9297697942085 530.4767096981442 771.7673890985259 529.0902751133688 767.0 522.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="778.0" y="602.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figue 1
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p37" name="p35" type="cso30:c:ProcessBiological">
<csml:connector id="c96" name="c96" refID="MO000016573" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="816.9271281140216" y="571.9697679140744"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="924.0 762.0 816.9271281140216 571.9697679140744" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="814.3134651462436 573.4424409568325 819.5407910817994 570.4970948713162 812.9999999999999 565.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c97" name="c97" refID="e13" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="824.7721627102651" y="534.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="899.0 534.0 824.7721627102651 552.104350558472" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="825.4830312508382 555.0189115748213 824.0612941696921 549.1897895421225 817.0000000000001 554.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c98" name="c98" refID="e67" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="801.5699763999032" y="469.9796695986459"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="807.0 546.0 801.5699763999032 469.9796695986459" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="798.5776003004111 470.1934107486096 804.5623524993955 469.76592844868213 801.0 462.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="798.0" y="546.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figue 1
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p38" name="p35" type="cso30:c:ProcessBiological">
<csml:connector id="c99" name="c99" refID="MO000041446" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="804.1020362515915" y="388.68253731564"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="878.0 427.0 804.1020362515915 388.68253731564" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="802.7210847582264 391.3458009099868 805.4829877449564 386.0192737212932 797.0 385.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c104" name="c104" refID="MO000041125" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="759.0" y="275.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="759.0 275.0 782.8881888299625 362.28376687870923" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="785.7817762504466 361.49183768994516 779.9946014094785 363.07569606747325 785.0 370.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c105" name="c105" refID="MO000041437" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="748.8605619655765" y="372.4871333448388"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="778.0 378.0 748.8605619655765 372.4871333448388" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="748.302886961262 375.43484408193 749.418236969891 369.5394226077476 741.0 371.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="778.0" y="370.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figue 1
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p39" name="p39" type="cso30:c:ProcessBiological">
<csml:connector id="c103" name="c103" refID="e64" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="367.0" y="566.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" points="367.0 566.0 445.49965610125224 977.1419488303085" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="448.4464252898866 976.579319868278 442.5528869126179 977.7045777923389 447.00000000000006 985.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c110" name="c110" refID="e70" type="cso30:c:InputInhibitor">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="412.0" y="857.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<inhibitoryConnector depth="0" points="412.0 857.0 444.9731095526406 981.134059492294" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<bioInhibitoryConnectorArrow pointsInAbsoluteCoordinate="451.7385054411261 979.337001209415 438.20771366415516 982.9311177751729 439.23460411151456 986.7970582828789 452.7653958884855 983.202941717121" size="4.0 14.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c106" name="c106" refID="e42" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="456.0" y="1008.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="456.0 1008.0 553.9193878622656 1173.1189677677419" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="556.4997749493624 1171.5887382160915 551.3390007751689 1174.6491973193924 558.0000000000001 1180.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="437.0" y="985.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="23.0" outlineColor="0 0 0 0" resourceID="10068" width="23.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,17709747
However, the Atg5–Atg12 conjugate, a key component of the autophagic machinery, interacts with the cytosolic RNA sensor RIG-I and its adaptor IFN-β promoter stimulator 1 (IPS-1), resulting in the inhibition of the type I IFN production pathway</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p40" name="p34" type="cso30:c:ProcessBiological">
<csml:connector id="c100" name="c100" refID="e34" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="465.9509778128281" y="408.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="487.0 408.0 465.9509778128281 434.7160666221797" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="468.30745282951074 436.57268330199025 463.59450279614555 432.85944994236917 461.0 441.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c101" name="c101" refID="MO000094908" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="276.0" y="461.99171555893554"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="276.0 553.0 434.06702034500665 461.99171555893554" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="432.5701270104058 459.391848188313 435.5639136796075 464.59158292955806 441.0 457.99999999999994" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c102" name="c102" refID="e68" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="452.0" y="462.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="452.0 462.0 452.0 580.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="455.0 580.0 449.0 580.0 452.0 588.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="441.0" y="441.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10005" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611
Figure 1
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p41" name="p41" type="cso30:c:ProcessBiological">
<csml:connector id="c107" name="c107" refID="e64" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="301.1881340053539" y="566.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="359.0 566.0 301.1881340053539 769.3050620811722" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="304.07373572491434 770.1256123331799 298.30253228579346 768.4845118291645 299.00000000000006 777.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c108" name="c108" refID="e69" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="296.0" y="806.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="296.0 857.0 296.0 806.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="293.0 806.0 299.0 806.0 296.0 798.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:connector id="c109" name="c109" refID="e70" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="306.0" y="793.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="306.0 793.0 390.72249596909575 831.6776612032828" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="391.9683730178647 828.9485971916937 389.4766189203268 834.4067252148719 398.0 835.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="285.0" y="777.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10005" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18280611,17709747
However, the Atg5–Atg12 conjugate, a key component of the autophagic machinery, interacts with the cytosolic RNA sensor RIG-I and its adaptor IFN-β promoter stimulator 1 (IPS-1), resulting in the inhibition of the type I IFN production pathway</csml:comment>
</csml:comments>
</csml:process>
</csml:processSet>
<csml:factSet>
<csml:fact id="g3" name="g1" type="cso30:c:FactViewGroup">
<csml:participant id="participant-e6" name="participant-e6" refID="e6" type="csml-element:participant"/>
<csml:participant id="participant-e5" name="participant-e5" refID="e5" type="csml-element:participant"/>
<csml:participant id="participant-e11" name="participant-e11" refID="e11" type="csml-element:participant"/>
</csml:fact>
<csml:fact id="g1" name="g1" type="cso30:c:FactViewGroup">
<csml:participant id="participant-e1" name="participant-e1" refID="e1" type="csml-element:participant"/>
<csml:participant id="participant-e3" name="participant-e3" refID="e3" type="csml-element:participant"/>
<csml:participant id="participant-e4" name="participant-e4" refID="e4" type="csml-element:participant"/>
<csml:participant id="participant-e2" name="participant-e2" refID="e2" type="csml-element:participant"/>
</csml:fact>
<csml:fact id="g14" name="g1" type="cso30:c:FactViewGroup"/>
<csml:fact id="g12" name="g2" type="cso30:c:FactViewGroup">
<csml:participant id="participant-e53" name="participant-e53" refID="e53" type="csml-element:participant"/>
<csml:participant id="participant-e58" name="participant-e58" refID="e58" type="csml-element:participant"/>
<csml:participant id="participant-e54" name="participant-e54" refID="e54" type="csml-element:participant"/>
<csml:participant id="participant-e50" name="participant-e50" refID="e50" type="csml-element:participant"/>
<csml:participant id="participant-e56" name="participant-e56" refID="e56" type="csml-element:participant"/>
<csml:participant id="participant-e57" name="participant-e57" refID="e57" type="csml-element:participant"/>
<csml:participant id="participant-e55" name="participant-e55" refID="e55" type="csml-element:participant"/>
<csml:participant id="participant-e52" name="participant-e52" refID="e52" type="csml-element:participant"/>
<csml:participant id="participant-e51" name="participant-e51" refID="e51" type="csml-element:participant"/>
<csml:participant id="participant-e59" name="participant-e59" refID="e59" type="csml-element:participant"/>
<csml:participant id="participant-g13" name="participant-g13" refID="g13" type="csml-element:participant"/>
</csml:fact>
<csml:fact id="g13" name="g2" type="cso30:c:FactViewGroup">
<csml:participant id="participant-e61" name="participant-e61" refID="e61" type="csml-element:participant"/>
<csml:participant id="participant-e60" name="participant-e60" refID="e60" type="csml-element:participant"/>
<csml:participant id="participant-e62" name="participant-e62" refID="e62" type="csml-element:participant"/>
</csml:fact>
</csml:factSet>
<csml:modelSimulationProperty>
<csml:parameter key="enhancedFiring" value="true"/>
<csml:parameter key="discreteWeakFiring" value="false"/>
<csml:parameter key="continousWeakFiring" value="false"/>
<csml:parameter key="samplingInterval" value="0.1"/>
<csml:parameter key="plotUpdateInterval" value="1.0"/>
<csml:parameter key="logUpdateInterval" value="1.0"/>
<csml:parameter key="simulationTime" value="1000.0"/>
<csml:parameter key="firingAccuracy" value="1.0E-10"/>
</csml:modelSimulationProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:model>
<csml:subModelSet/>
<csml:viewSet>
<csml:view name="Default View" refAnimationID="default" refModelID="undef" refPositionID="default" refShapeID="default" viewID="default"/>
</csml:viewSet>
<csml:references>
<csml:unificationXref db="TRANSPATH" name="MO000066987" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000066987" unificationXrefID="ref847">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000103999" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000103999" unificationXrefID="ref848">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000157" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000157" unificationXrefID="ref849">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR003591" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR003591" unificationXrefID="ref850">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000483" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000483" unificationXrefID="ref851">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR001611" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR001611" unificationXrefID="ref852">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000372" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000372" unificationXrefID="ref853">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000019398" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000019398" unificationXrefID="ref854">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000042126" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000042126" unificationXrefID="ref855">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000042007" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000042007" unificationXrefID="ref856">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000022224" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000022224" unificationXrefID="ref857">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000041446" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000041446" unificationXrefID="ref858">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000042012" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000042012" unificationXrefID="ref859">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000022224" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000022224" unificationXrefID="ref860">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR002069" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002069" unificationXrefID="ref861">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000016665" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000016665" unificationXrefID="ref862">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000471" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000471" unificationXrefID="ref863">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000016660" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000016660" unificationXrefID="ref864">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000042409" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000042409" unificationXrefID="ref865">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000719" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000719" unificationXrefID="ref866">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000019331" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000019331" unificationXrefID="ref867">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR008984" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR008984" unificationXrefID="ref868">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR001346" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR001346" unificationXrefID="ref869">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000007694" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000007694" unificationXrefID="ref870">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000041456" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000041456" unificationXrefID="ref871">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSFAC" name="T09392" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transfac/10.4/bin/start.cgi?ac=TransFac:T09392" unificationXrefID="ref872">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000088437" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000088437" unificationXrefID="ref873">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSFAC" name="T09392" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transfac/10.4/bin/start.cgi?ac=TransFac:T09392" unificationXrefID="ref874">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000088437" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000088437" unificationXrefID="ref875">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSFAC" name="G010228" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transfac/10.4/bin/start.cgi?ac=TransFac:G010228" unificationXrefID="ref876">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSFAC" name="G010228" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transfac/10.4/bin/start.cgi?ac=TransFac:G010228" unificationXrefID="ref877">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000094908" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000094908" unificationXrefID="ref878">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000157" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000157" unificationXrefID="ref879">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR004075" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR004075" unificationXrefID="ref880">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000488" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000488" unificationXrefID="ref881">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000016573" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000016573" unificationXrefID="ref882">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000041125" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000041125" unificationXrefID="ref883">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000041437" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000041437" unificationXrefID="ref884">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
</csml:references>
</csml:project>
