<?xml version="1.0" encoding="UTF-8"?>
<csml:project xmlns:csml="http://www.csml.org/csml/version3" majorVersion="3" minorVersion="0" projectID="local" projectVersionID="undef">
<csml:model modelID="undef" modelVersionID="undef">
<csml:entitySet>
<csml:entity id="e10" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m10">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="178.66804691710698" y="137.36058442409228"/>
<csml:shape depth="72" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1341.6633088463152" outlineColor="0 0 0 0" resourceID="20045" width="953.7537240064179"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e8" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m8">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="181.5628382427823" y="126.40450763738008"/>
<csml:shape depth="90" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1344.1036503246562" outlineColor="0 0 0 0" resourceID="20068" width="925.6912192318563"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cell_WithoutCellWall_"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e7" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m7">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="178.1154425799446" y="102.27273799751666"/>
<csml:shape depth="100" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1367.3139312096434" outlineColor="0 0 0 0" resourceID="20004" width="964.9533212443058"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cell"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e9" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m9">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="190.75589334368263" y="150.53627727724353"/>
<csml:shape depth="81" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1326.476067752548" outlineColor="0 0 0 0" resourceID="20046" width="921.4649310425915"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000019398" name="TLR3" refUnificationXrefID="ref116;ref117;ref118;ref119;ref120;ref121;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m3965">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="721.0" y="313.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_933f3f" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#933f3f;stop-opacity:1;" offset="15%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 60 48.54 l -0.3772 -11.808 c 13.6534 -12.4868 26.6272 14.8035 0.3772 -25.2737 l -11.9246 -3.3074 c -8.2669 -16.2079 23.0311 -19.5108 -25.1571 -8.1508 l -6.993 9.7635 c -18.7631 2.4691 -12.3928 -26.8612 -15.9253 20.2365 l 7.6025 9.3425 c -3.3288 17.7341 -30.6905 2.909 15.3149 20.6575 l 11.6914 -3.9898 c 16.7054 8.4916 -6.575 28.6596 25.3903 -7.4684 z" style="fill:url(#MO_933f3f);stroke:none;"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000022224" name="dsRNA,Poly (I:C)" refUnificationXrefID="ref122;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m119368">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="663.0" y="71.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="26.0" outlineColor="0 0 0 0" width="26.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_691efd" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#691efd;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_691efd);stroke:none;" d="M 59.9996 30.0002 l -15.4678 -3.7536 c -9.2903 0.5201 -3.0479 -6.6761 -6.9808 -6.9004 l -32.0488 -5.8791 c -8.9965 1.9659 1.5646 -6.5422 -5.5022 -13.467 l 3.9806 13.4779 c 5.1653 6.7076 -5.152 5.624 -3.4102 8.6857 l 10.1452 26.9761 c 6.4643 5.7643 -7.3247 2.0977 -10.7157 10.8604 l 11.4876 -9.7242 c 4.125 -7.2277 8.1999 1.0521 10.3905 -1.7853 l 21.9036 -21.0973 c 2.5322 -7.7302 5.76 4.4445 16.2183 2.6067 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000018132" name="CD14" refUnificationXrefID="ref123;ref124;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m2828">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="712.0" y="132.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="24.0" outlineColor="0 0 0 0" width="24.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_976965" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#976965;stop-opacity:1;" offset="14%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 59.9985 48.5408 c 8.3013 -23.7449 -21.3957 -42.2786 -8.2478 -28.9603 c 20.5119 -6.1845 33.1518 -31.1471 8.2478 -8.1226 c -21.1788 -14.8467 -48.8885 6.2876 -31.5076 -1.4875 c 0.1545 -20.4648 -20.9011 -39.6115 -5.5728 -9.9703 c -21.3912 14.5699 -8.8197 46.1647 -11.2244 28.0393 c -20.4169 -6.4628 -46.0694 6.6662 -11.6937 1.9607 c 7.9597 23.8508 43.4375 22.2433 24.5712 18.8176 c -12.7721 16.4698 -7.5706 43.7308 -1.6531 11.1824 c 26.3105 0.1709 35.6664 -32.417 26.41 -16.4105 c 12.5225 16.6422 41.3907 20.3616 10.6718 4.9513 z" style="fill:url(#MO_976965);stroke:none;"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e12" name="dsRNA:CD14" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m12">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="818.5" y="136.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="24.355940676553907" outlineColor="0 0 0 0" resourceID="12" width="19.89068488585236"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e13" name="dsRNA:CD14" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m13">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="850.5" y="304.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="24.355940676553907" outlineColor="0 0 0 0" resourceID="12" width="19.89068488585236"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000066987" name="DDX58" refUnificationXrefID="ref125;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m41844">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="298.0" y="242.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="20.0" outlineColor="0 0 0 0" width="20.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_75175a" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#75175a;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_75175a);stroke:none;" d="M 55.1649 47.5686 c 0.5601 -7.2179 4.714 10.4493 -1.2168 -14.4358 c 2.6176 -7.4525 9.2483 -0.5606 -1.731 -25.2694 c 2.8438 -1.6074 6.452 -2.3695 7.7829 16.8886 c 2.2607 -1.648 3.0198 0.1667 -4.8357 -13.094 c -6.6798 -2.7638 11.3773 -1.2622 -14.0813 -3.302 c -6.2663 -4.7972 2.3258 -8.9846 -24.525 -6.1598 c -0.6471 -3.2063 -0.2561 -6.8791 18.4384 -2.1963 c -0.8663 -2.6634 1.0914 -2.8258 -13.9255 0.5606 c -4.6884 5.5095 2.3178 -11.2295 -7.4858 12.3956 c -6.4904 4.4877 -7.8112 -4.9922 -13.4267 21.4624 c -3.2439 -0.3741 -6.6099 -1.8821 3.6125 -18.246 c -2.7963 0.0021 -2.3455 -1.9131 -3.7709 13.4408 c 3.7821 6.1695 -9.9444 -5.6778 9.4547 10.9623 c 2.2549 7.5706 -7.1529 5.8991 16.2273 19.4243 c -1.3576 2.9749 -3.8296 5.7158 -16.206 -9.0802 c -0.862 2.6644 -2.5413 1.6432 11.5949 7.7464 c 7.026 -1.6967 -8.4636 7.7202 13.3291 -5.6201 c 7.8837 0.1913 3.39 8.6378 23.4555 -9.4575 c 2.4048 2.2129 4.243 5.4144 -13.6284 12.6339 c 2.2634 1.6448 0.7751 2.929 10.9372 -8.6533 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000103999" name="IFIH1" refUnificationXrefID="ref126;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m76904">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="534.0" y="342.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="20.0" outlineColor="0 0 0 0" width="20.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_1ec8f1" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#1ec8f1;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_1ec8f1);stroke:none;" d="M 60 48.5418 c -2.9644 -1.7553 -2.5903 -6.4943 -2.5531 -2.2866 c 4.9418 -1.2857 7.2631 -6.8443 -4.1717 -7.7833 l 6.3504 -2.0842 l 0.3744 -24.9285 c -2.6713 2.1389 -7.2945 0.3361 -3.0755 1.6028 c 0.2413 -4.8673 -4.5994 -8.6848 -9.0725 1.3684 l -0.1216 -6.3883 l -24.8123 -8.0421 c 1.3134 3.0773 -1.918 6.7021 0.6523 3.2769 c -4.7925 -1.7224 -10.1058 1.4769 -1.4353 8.6289 l -6.4257 -1.8641 l -15.7093 19.9582 c 3.4829 -0.2371 6.1091 3.8057 3.4785 0.4225 c -3.2035 3.8027 -1.6462 9.5975 8.1852 3.9646 l -3.8497 5.2361 l 15.1034 20.3768 c 0.8393 -3.2237 5.6937 -4.35 1.4976 -3.0159 c 2.8126 4.0727 9.0884 4.4548 6.494 -6.1787 l 4.0466 5.1002 l 25.0438 -7.3647 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e15" name="dsRNA" refUnificationXrefID="ref127;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m15">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="419.0" y="239.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="26.0" outlineColor="0 0 0 0" width="26.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_691efd" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#691efd;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_691efd);stroke:none;" d="M 59.9996 30.0002 l -15.4678 -3.7536 c -9.2903 0.5201 -3.0479 -6.6761 -6.9808 -6.9004 l -32.0488 -5.8791 c -8.9965 1.9659 1.5646 -6.5422 -5.5022 -13.467 l 3.9806 13.4779 c 5.1653 6.7076 -5.152 5.624 -3.4102 8.6857 l 10.1452 26.9761 c 6.4643 5.7643 -7.3247 2.0977 -10.7157 10.8604 l 11.4876 -9.7242 c 4.125 -7.2277 8.1999 1.0521 10.3905 -1.7853 l 21.9036 -21.0973 c 2.5322 -7.7302 5.76 4.4445 16.2183 2.6067 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000041446" name="dsRNA:TLR3" refUnificationXrefID="ref128;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m19314">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="729.0" y="381.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_691efd" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#691efd;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_691efd);stroke:none;" d="M 49.9997 25.0002 l -12.8898 -3.128 c -7.7419 0.4334 -2.5399 -5.5634 -5.8173 -5.7503 l -26.7073 -4.8992 c -7.4971 1.6382 1.3038 -5.4518 -4.5852 -11.2225 l 3.3172 11.2316 c 4.3044 5.5897 -4.2933 4.6867 -2.8418 7.2381 l 8.4543 22.4801 c 5.3869 4.8036 -6.1039 1.7481 -8.9298 9.0503 l 9.573 -8.1035 c 3.4375 -6.0231 6.8332 0.8768 8.6588 -1.4878 l 18.253 -17.5811 c 2.1102 -6.4418 4.8 3.7038 13.5152 2.1722 z" /&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_933f3f" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#933f3f;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_933f3f);stroke:none;" d="M 60 50.45 l -0.3143 -9.84 c 11.3778 -10.4057 22.1893 12.3362 0.3143 -21.0614 l -9.9372 -2.7562 c -6.8891 -13.5066 19.1926 -16.259 -20.9642 -6.7923 l -5.8275 8.1362 c -15.6359 2.0576 -10.3273 -22.3843 -13.2711 16.8638 l 6.3354 7.7854 c -2.774 14.7784 -25.5754 2.4242 12.7624 17.2146 l 9.7428 -3.3248 c 13.9212 7.0763 -5.4792 23.883 21.1586 -6.2237 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e14" name="dsRNA:TLR3(2)" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m14">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="730.5" y="492.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="23.05615730711548" outlineColor="0 0 0 0" resourceID="12" width="18.829195134144307"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000041125" name="TRIF" refUnificationXrefID="ref129;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m18998">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="618.0" y="602.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="20.0" outlineColor="0 0 0 0" width="20.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_59ab14" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#59ab14;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_59ab14);stroke:none;" d="M 60 48.5415 c 0.8103 -7.397 2.3214 -19.8066 -3.5398 -20.1631 c 9.5776 -10.3066 -2.5463 -7.5712 3.5398 -16.9193 c -7.1467 -3.0187 -19.0893 -8.2203 -21.2568 -3.0292 c -7.3468 -11.8479 -8.3579 -0.0366 -15.8253 -8.4299 c -5.2269 5.5315 -14.1193 14.7258 -9.5978 18.2907 c -14.118 2.984 -2.6193 7.5483 -13.3201 11.7096 c 3.9166 6.4373 10.3631 17.3217 15.3246 14.3334 c -1.3787 13.6923 6.7392 4.7019 7.5932 15.6663 c 7.6473 -1.5531 20.5241 -4.0206 19.0691 -9.4324 c 13.2666 5.4782 6.7842 -4.643 18.013 -2.0267 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000041437" name="dsRNA:TLR3(2):TRIF" refUnificationXrefID="ref130;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m19305">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="759.0" y="655.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="26.0" outlineColor="0 0 0 0" width="26.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_691efd" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#691efd;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_691efd);stroke:none;" d="M 42.8569 21.4287 l -11.0484 -2.6811 c -6.6359 0.3715 -2.1771 -4.7686 -4.9863 -4.9289 l -22.892 -4.1994 c -6.4261 1.4042 1.1176 -4.673 -3.9301 -9.6193 l 2.8433 9.6271 c 3.6895 4.7911 -3.68 4.0171 -2.4359 6.2041 l 7.2466 19.2686 c 4.6174 4.1174 -5.2319 1.4984 -7.6541 7.7574 l 8.2054 -6.9459 c 2.9464 -5.1626 5.8571 0.7515 7.4218 -1.2752 l 15.6454 -15.0695 c 1.8087 -5.5216 4.1143 3.1746 11.5845 1.8619 z" /&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_933f3f" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#933f3f;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_933f3f);stroke:none;" d="M 60 51.8143 l -0.2694 -8.4343 c 9.7524 -8.9191 19.0194 10.5739 0.2694 -18.0526 l -8.5176 -2.3624 c -5.9049 -11.5771 16.4508 -13.9363 -17.9694 -5.822 l -4.995 6.9739 c -13.4022 1.7636 -8.852 -19.1866 -11.3752 14.4546 l 5.4304 6.6732 c -2.3777 12.6672 -21.9218 2.0779 10.9392 14.7554 l 8.351 -2.8499 c 11.9324 6.0654 -4.6964 20.4711 18.1359 -5.3346 z" /&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_59ab14" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#59ab14;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_59ab14);stroke:none;" d="M 42.8571 51.8154 c 0.5788 -5.2836 1.6581 -14.1476 -2.5284 -14.4022 c 6.8411 -7.3619 -1.8188 -5.408 2.5284 -12.0852 c -5.1048 -2.1562 -13.6352 -5.8716 -15.1834 -2.1637 c -5.2477 -8.4628 -5.9699 -0.0261 -11.3038 -6.0214 c -3.7335 3.9511 -10.0852 10.5184 -6.8556 13.0648 c -10.0843 2.1314 -1.8709 5.3916 -9.5144 8.364 c 2.7976 4.5981 7.4022 12.3726 10.9461 10.2381 c -0.9848 9.7802 4.8137 3.3585 5.4237 11.1902 c 5.4624 -1.1094 14.6601 -2.8719 13.6208 -6.7374 c 9.4761 3.913 4.8459 -3.3164 12.8664 -1.4476 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e16" name="dsRNA:TLR3(2){p}" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m16">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="726.5" y="548.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="23.05615730711548" outlineColor="0 0 0 0" resourceID="12" width="18.829195134144307"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000000065" name="RIP1" refUnificationXrefID="ref131;ref132;ref133;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m17">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="315.0" y="555.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="18.0" outlineColor="0 0 0 0" width="18.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_aa373f" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#aa373f;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_aa373f);stroke:none;" d="M 57.5627 48.2396 c -1.6543 -3.8402 3.8436 -5.8272 2.4373 -6.1846 l -2.2156 -27.1125 l -0.2217 -3.5545 c -4.2186 0.3633 -4.4377 -5.4021 -5.2173 -4.1949 l -26.8586 -6.3025 l -3.5 -0.8906 c -0.9527 4.0647 -6.5864 2.4885 -5.6618 3.5922 l -14.3839 23.2176 l -1.9412 3.0041 c 3.6296 2.149 0.3671 6.94 1.7181 6.4147 l 17.9689 20.6517 l 2.3001 2.7471 c 3.1961 -2.7368 6.8132 1.8007 6.7236 0.3725 l 25.4891 -10.454 l 3.3628 -1.3061 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e17" name="TRIF:RIP1" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m18">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="344.5" y="674.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="27.05549075154141" outlineColor="0 0 0 0" resourceID="12" width="22.09531744709214"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000016963" name="TRAF3" refUnificationXrefID="ref134;ref135;ref136;ref137;ref138;ref139;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m1872">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="483.0" y="503.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="18.0" outlineColor="0 0 0 0" width="18.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_8b1527" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#8b1527;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_8b1527);stroke:none;" d="M 52.8059 47.4706 c -7.7431 -3.717 11.6089 -12.322 7.1941 -19.4363 l -0.9501 -11.2137 l -6.244 -1.3273 c -5.8784 6.3193 -7.9683 -15.0039 -16.0049 -12.9444 l -10.8101 -2.5489 l -3.1742 5.6121 c 4.11 7.6223 -16.5332 3.0487 -17.0856 11.4363 l -5.7311 9.6382 l 4.2819 4.7956 c 8.4188 -1.6086 -2.2498 16.888 5.4452 20.0122 l 7.2681 8.5056 l 5.8205 -2.6483 c 1.0928 -8.6166 15.143 7.3886 20.4506 0.9322 l 10.2227 -4.3818 l -0.6848 -6.4321 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e18" name="Nap1" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m19">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="396.5" y="515.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="25.477963372912054" outlineColor="0 0 0 0" resourceID="35" width="15.711410746629104"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e19" name="TRIF:TRAF3:Nap1" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m20">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="457.5" y="668.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="39.596256193797025" outlineColor="0 0 0 0" resourceID="30" width="28.377316938887873"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000000212" name="TRAF6" refUnificationXrefID="ref140;ref141;ref142;ref143;ref144;ref145;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m183">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="714.0" y="762.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="20.0" outlineColor="0 0 0 0" width="20.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_8b1f27" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#8b1f27;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_8b1f27);stroke:none;" d="M 52.8059 47.4706 c -7.7431 -3.717 11.6089 -12.322 7.1941 -19.4363 l -0.9501 -11.2137 l -6.244 -1.3273 c -5.8784 6.3193 -7.9683 -15.0039 -16.0049 -12.9444 l -10.8101 -2.5489 l -3.1742 5.6121 c 4.11 7.6223 -16.5332 3.0487 -17.0856 11.4363 l -5.7311 9.6382 l 4.2819 4.7956 c 8.4188 -1.6086 -2.2498 16.888 5.4452 20.0122 l 7.2681 8.5056 l 5.8205 -2.6483 c 1.0928 -8.6166 15.143 7.3886 20.4506 0.9322 l 10.2227 -4.3818 l -0.6848 -6.4321 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e20" name="TRIF:TRAF6" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m21">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="576.5" y="786.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="27.94534244292619" outlineColor="0 0 0 0" resourceID="12" width="22.82202966172305"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000000058" name="NF-kappaB" refUnificationXrefID="ref146;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m22">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="289.0" y="869.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_c0a85b" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#c0a85b;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 59.9987 30 c -33.2435 0.7613 5.9036 22.2992 -25.8364 -16.4278 l -1.8953 25.5774 c -14.6426 13.9063 -31.9178 -9.3883 -29.5118 -39.1497 c 17.3491 25.7524 18.323 -15.7914 -2.7553 28.5239 l 25.3495 -11.2984 c 20.5888 4.5578 7.0015 29.7852 -22.5942 42.7745 c 15.8957 -26.5149 -24.2266 -6.5088 28.5917 -12.0961 l -23.4542 -14.2779 c -5.9449 -18.4641 24.9151 -20.397 52.1072 -3.6249 z" style="fill:url(#MO_c0a85b);stroke:none;"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e21" name="NF-kappaB{active}" refUnificationXrefID="ref147;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m23">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="365.0" y="937.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_c0a85b" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#c0a85b;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 59.9987 30 c -33.2435 0.7613 5.9036 22.2992 -25.8364 -16.4278 l -1.8953 25.5774 c -14.6426 13.9063 -31.9178 -9.3883 -29.5118 -39.1497 c 17.3491 25.7524 18.323 -15.7914 -2.7553 28.5239 l 25.3495 -11.2984 c 20.5888 4.5578 7.0015 29.7852 -22.5942 42.7745 c 15.8957 -26.5149 -24.2266 -6.5088 28.5917 -12.0961 l -23.4542 -14.2779 c -5.9449 -18.4641 24.9151 -20.397 52.1072 -3.6249 z" style="fill:url(#MO_c0a85b);stroke:none;"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000019331" name="TBK1" refUnificationXrefID="ref148;ref149;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m3902">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="401.0" y="721.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_d73c10" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#d73c10;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_d73c10);stroke:none;" d="M 59.9986 48.5407 c 0.9871 -13.4342 0.1887 -4.8076 -15.7675 -1.0439 c 3.9483 -9.4993 10.8696 -9.6801 13.1979 -13.904 l 2.57 -22.1338 c -13.1289 -5.0441 -4.7493 -1.6563 -5.9165 13.9392 c -8.279 -6.5065 -6.3213 -12.8227 -9.8259 -16.234 l -21.3394 -9.1642 c -9.1011 10.3168 -3.1239 3.7841 12.1112 9.6592 c -9.065 5.4778 -14.7763 1.7554 -19.2702 3.8711 l -15.7584 16.47 c 7.504 11.4202 2.8186 3.9949 13.4017 -7.9699 c 2.677 9.8921 -2.8109 13.9075 -2.0838 18.6265 l 11.6003 19.3432 c 13.739 -3.2587 4.8659 -1.3151 -3.8285 -14.5846 c 10.7193 0.6358 13.0389 6.8403 17.9825 7.6409 l 22.9278 -4.5152 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000016608" name="IKK-i" refUnificationXrefID="ref150;ref151;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m1599">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="397.0" y="781.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_2a93dd" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#2a93dd;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_2a93dd);stroke:none;" d="M 60 48.5407 c -0.0085 -0.7599 8.2943 -1.5313 -5.0689 -5.1523 c -0.053 -4.5216 5.4767 0.3552 -5.5543 -11.4708 l 10.6232 -20.4586 c -0.7627 -0.2272 1.0317 -7.9755 -6.7189 2.9925 c -4.538 -1.3492 2.0477 -4.8438 -13.1875 1.4793 l -17.1759 -15.9308 c -0.4628 0.6195 -7.6567 -3.3978 0.9165 7.0021 c -2.7518 3.6877 -4.2113 -3.349 -2.5957 12.3851 l -21.2386 10.6128 c 0.4766 0.6101 -5.7638 5.8755 7.2852 1.3349 c 2.8376 3.6285 -4.6503 2.7743 11.5829 6.1753 l 4.0496 22.4899 c 0.7574 -0.2425 4.0945 7.0288 3.5861 -6.1771 c 4.5053 -1.4451 1.3371 5.0633 9.7545 -8.5688 l 23.7416 3.2867 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e22" name="TRIF:TRAF3:Nap1:TBK1:IKK-i" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m24">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="518.0" y="832.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="32.94117647058823" outlineColor="0 0 0 0" resourceID="31" width="19.764705882352942"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000007694" name="IRF-3" refUnificationXrefID="ref152;ref153;ref154;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m977">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="764.0" y="776.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="24.0" outlineColor="0 0 0 0" width="24.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_6ad24b" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#6ad24b;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 60 48.5413 c -5.4791 -8.878 6.0417 -4.3573 -9.8171 -2.9348 l -4.5651 -27.6151 c -1.9754 -5.4859 12.2339 -9.9822 14.3816 -6.5322 c -10.571 2.2124 -2.4899 -6.8115 -5.9681 7.9727 l -29.0256 -4.4044 c -6.096 0.0919 -6.2013 -14.1503 -2.0879 -15.0274 c -1.0542 10.2454 -7.5808 0.1474 6.1282 7.8622 l -13.374 24.8929 c -1.7923 5.5423 -16.0665 1.2366 -15.6721 -2.7553 c 9.9194 4.1194 -2.1948 6.9024 9.7557 -3.1134 l 20.7599 19.7894 c 4.9886 3.3337 -3.7283 14.915 -7.5982 13.3243 c 7.1844 -7.6993 6.2238 4.1184 -0.0987 -9.7867 l 26.2042 -12.6627 c 4.875 -3.4821 13.7627 7.9809 10.9766 10.9902 z" style="fill:url(#MO_6ad24b);stroke:none;"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000041456" name="IRF-3{p}" refUnificationXrefID="ref155;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m19324">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="813.0" y="869.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;linearGradient gradientTransform="" id="stroke1_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:#808080;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;linearGradient gradientTransform="" id="stroke2_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:#008000;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;linearGradient gradientTransform="" id="stroke3_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:#00ff00;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;linearGradient gradientTransform="" id="color3_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:blue;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;linearGradient gradientTransform="" id="color2_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:orange;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;radialGradient gradientTransform="" id="color1_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:yellow;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;radialGradient id="MO_6ad24b" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#6ad24b;stop-opacity:1;" offset="2%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 60 48.5413 c -5.4791 -8.878 6.0417 -4.3573 -9.8171 -2.9348 l -4.5651 -27.6151 c -1.9754 -5.4859 12.2339 -9.9822 14.3816 -6.5322 c -10.571 2.2124 -2.4899 -6.8115 -5.9681 7.9727 l -29.0256 -4.4044 c -6.096 0.0919 -6.2013 -14.1503 -2.0879 -15.0274 c -1.0542 10.2454 -7.5808 0.1474 6.1282 7.8622 l -13.374 24.8929 c -1.7923 5.5423 -16.0665 1.2366 -15.6721 -2.7553 c 9.9194 4.1194 -2.1948 6.9024 9.7557 -3.1134 l 20.7599 19.7894 c 4.9886 3.3337 -3.7283 14.915 -7.5982 13.3243 c 7.1844 -7.6993 6.2238 4.1184 -0.0987 -9.7867 l 26.2042 -12.6627 c 4.875 -3.4821 13.7627 7.9809 10.9766 10.9902 z" style="fill:url(#MO_6ad24b);stroke:none;"/&gt;
&lt;ellipse rx="11.5078" ry="11.716" style="fill:url(#color1_0_7J]v]j1TnAamZwDU);stroke:none;" cx="11.7917" cy="12"/&gt;
&lt;path style="fill:url(#color2_0_7J]v]j1TnAamZwDU);stroke:none;" d="M 0 12 C 0 18.6169 5.2898 24 11.7917 24 c 6.5021 0 11.7918 -5.3831 11.7918 -12 C 23.5834 5.3832 18.2937 0 11.7917 0 C 5.2898 0 0 5.3832 0 12 z M 0.568 12 C 0.568 5.6964 5.6029 0.568 11.7917 0.568 C 17.9805 0.568 23.0154 5.6964 23.0154 12 c 0 6.3036 -5.035 11.432 -11.2238 11.432 C 5.6029 23.432 0.568 18.3036 0.568 12 z"/&gt;
&lt;path style="fill:url(#color3_0_7J]v]j1TnAamZwDU);stroke:none;" d="M 8.6611 19.6732 c 0 0.5832 -0.4166 0.8748 -0.9789 0.8748 c -0.5832 0 -0.9789 -0.2916 -0.9789 -0.8956 V 6.4471 c 0 -1.6038 0.6456 -2.2495 2.1244 -2.2495 h 4.624 c 3.291 0 5.1446 1.6871 5.1446 4.6447 c 0 3.1243 -1.9161 4.9363 -5.228 4.9363 h -4.7072 V 19.6732 z M 13.3267 12.0292 c 2.1037 0 3.2284 -1.1247 3.2284 -3.1452 c 0 -1.8746 -1.1456 -2.916 -3.2284 -2.916 h -3.9991 c -0.4582 0 -0.6665 0.2708 -0.6665 0.729 v 5.3322 H 13.3267 z"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e23" name="IRF-3{p}" refUnificationXrefID="ref156;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m25">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="701.0" y="1005.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;linearGradient gradientTransform="" id="stroke1_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:#808080;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;linearGradient gradientTransform="" id="stroke2_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:#008000;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;linearGradient gradientTransform="" id="stroke3_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:#00ff00;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;linearGradient gradientTransform="" id="color3_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:blue;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;linearGradient gradientTransform="" id="color2_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" x1="0%" y1="0%" x2="100%" y2="0%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:orange;stop-opacity:1;"/&gt;
&lt;/linearGradient&gt;
&lt;radialGradient gradientTransform="" id="color1_0_7J]v]j1TnAamZwDU" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:yellow;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;radialGradient id="MO_6ad24b" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#6ad24b;stop-opacity:1;" offset="2%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 60 48.5413 c -5.4791 -8.878 6.0417 -4.3573 -9.8171 -2.9348 l -4.5651 -27.6151 c -1.9754 -5.4859 12.2339 -9.9822 14.3816 -6.5322 c -10.571 2.2124 -2.4899 -6.8115 -5.9681 7.9727 l -29.0256 -4.4044 c -6.096 0.0919 -6.2013 -14.1503 -2.0879 -15.0274 c -1.0542 10.2454 -7.5808 0.1474 6.1282 7.8622 l -13.374 24.8929 c -1.7923 5.5423 -16.0665 1.2366 -15.6721 -2.7553 c 9.9194 4.1194 -2.1948 6.9024 9.7557 -3.1134 l 20.7599 19.7894 c 4.9886 3.3337 -3.7283 14.915 -7.5982 13.3243 c 7.1844 -7.6993 6.2238 4.1184 -0.0987 -9.7867 l 26.2042 -12.6627 c 4.875 -3.4821 13.7627 7.9809 10.9766 10.9902 z" style="fill:url(#MO_6ad24b);stroke:none;"/&gt;
&lt;ellipse rx="11.5078" ry="11.716" style="fill:url(#color1_0_7J]v]j1TnAamZwDU);stroke:none;" cx="11.7917" cy="12"/&gt;
&lt;path style="fill:url(#color2_0_7J]v]j1TnAamZwDU);stroke:none;" d="M 0 12 C 0 18.6169 5.2898 24 11.7917 24 c 6.5021 0 11.7918 -5.3831 11.7918 -12 C 23.5834 5.3832 18.2937 0 11.7917 0 C 5.2898 0 0 5.3832 0 12 z M 0.568 12 C 0.568 5.6964 5.6029 0.568 11.7917 0.568 C 17.9805 0.568 23.0154 5.6964 23.0154 12 c 0 6.3036 -5.035 11.432 -11.2238 11.432 C 5.6029 23.432 0.568 18.3036 0.568 12 z"/&gt;
&lt;path style="fill:url(#color3_0_7J]v]j1TnAamZwDU);stroke:none;" d="M 8.6611 19.6732 c 0 0.5832 -0.4166 0.8748 -0.9789 0.8748 c -0.5832 0 -0.9789 -0.2916 -0.9789 -0.8956 V 6.4471 c 0 -1.6038 0.6456 -2.2495 2.1244 -2.2495 h 4.624 c 3.291 0 5.1446 1.6871 5.1446 4.6447 c 0 3.1243 -1.9161 4.9363 -5.228 4.9363 h -4.7072 V 19.6732 z M 13.3267 12.0292 c 2.1037 0 3.2284 -1.1247 3.2284 -3.1452 c 0 -1.8746 -1.1456 -2.916 -3.2284 -2.916 h -3.9991 c -0.4582 0 -0.6665 0.2708 -0.6665 0.729 v 5.3322 H 13.3267 z"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e24" name="SARM" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m26">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="548.0" y="435.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="17.51999999999999" outlineColor="0 0 0 0" resourceID="34" width="23.35999999999999"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e25" name="TRIF:SARM" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m27">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="548.5" y="654.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="27.565405765705716" outlineColor="0 0 0 0" resourceID="12" width="22.511748041993"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e26" name="NF-kappaB{active}" refUnificationXrefID="ref157;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m28">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="513.0" y="1077.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="21.0" outlineColor="0 0 0 0" width="21.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_c0a85b" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#c0a85b;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 59.9987 30 c -33.2435 0.7613 5.9036 22.2992 -25.8364 -16.4278 l -1.8953 25.5774 c -14.6426 13.9063 -31.9178 -9.3883 -29.5118 -39.1497 c 17.3491 25.7524 18.323 -15.7914 -2.7553 28.5239 l 25.3495 -11.2984 c 20.5888 4.5578 7.0015 29.7852 -22.5942 42.7745 c 15.8957 -26.5149 -24.2266 -6.5088 28.5917 -12.0961 l -23.4542 -14.2779 c -5.9449 -18.4641 24.9151 -20.397 52.1072 -3.6249 z" style="fill:url(#MO_c0a85b);stroke:none;"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000000276" name="AP-1{active}" refUnificationXrefID="ref158;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m219">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="566.0" y="1034.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="20.0" outlineColor="0 0 0 0" width="20.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_88f3ed" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#88f3ed;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 60 28.5137 c -11.7301 -4.4713 -14.7938 -9.1466 -7.4546 -19.3474 l -40.1292 -9.1662 c 2.1343 12.7789 -0.2349 17.8706 -12.4162 16.3742 l 12.4162 40.6526 c 9.5957 -8.3076 15.0287 -8.7241 19.8708 2.9732 l 27.713 -31.4863 z" style="fill:url(#MO_88f3ed);stroke:none;"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000000030" name="PI3K" refUnificationXrefID="ref159;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m29">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="1005.0" y="585.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_37d4d9" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#37d4d9;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 59.9994 30.0002 c -1.6682 5.0688 -9.086 12.4198 -22.1514 -9.4829 l -9.2313 7.6726 c -3.7401 5.2935 -8.5146 3.9482 -20.2958 -15.4556 c -13.8698 2.9694 -7.1013 -4.6793 -8.3208 -12.7344 c 5.903 -1.2834 16.9623 0.6048 1.5932 21.3548 l 12.2881 3.0872 c 7.1635 0.1583 8.2055 4.4121 -5.3073 22.9499 c 9.9043 8.9181 -1.1285 7.6661 -8.5734 12.6081 c -4.2348 -3.7859 -7.8763 -13.0245 20.5582 -11.8725 l -3.0567 -10.7598 c -3.4235 -5.4518 0.3091 -8.3598 25.6032 -7.4943 c 3.9655 -11.8874 8.2303 -2.9863 16.8948 0.1263 z" style="fill:url(#MO_37d4d9);stroke:none;"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e27" name="dsRNA:TLR3(2){p}:PI3K" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m30">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="932.5" y="624.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="32.4059460451459" outlineColor="0 0 0 0" resourceID="30" width="23.22426133235456"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_EndosomeLumen"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000000085" name="Src" refUnificationXrefID="ref160;ref161;ref162;ref163;ref164;ref165;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m77">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="907.0" y="779.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="18.0" outlineColor="0 0 0 0" width="18.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_ca9090" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#ca9090;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_ca9090);stroke:none;" d="M 54.6472 45.1097 c 4.1443 -5.3024 -5.8582 -4.8818 5.3528 -0.3047 l -5.3528 -31.9795 c -3.8453 -5.5163 -6.5298 3.9725 1.3595 -5.1027 l -32.5694 -4.8739 c -6.5211 1.8931 1.8226 7.3372 -4.5125 -2.849 l -14.7762 28.9674 c -0.1849 6.6861 7.6561 0.5619 -4.1487 3.3419 l 23.4373 22.7766 c 6.4066 2.2392 2.909 -6.9899 1.9485 4.9141 l 29.261 -14.8906 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e28" name="dsRNA:TLR3(2){p}:PI3K:Src" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m31">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="871.0" y="705.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="30.294117647058826" outlineColor="0 0 0 0" resourceID="31" width="18.176470588235297"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000000048" name="AKT" refUnificationXrefID="ref166;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m45">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="897.0" y="857.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_2246f4" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#2246f4;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_2246f4);stroke:none;" d="M 60 42.4263 c 4.3954 -0.6872 5.4255 -3.2779 -10.8951 -10.4523 c -2.9003 -6.5545 3.4678 -5.7125 -6.1033 -4.2315 l -0.5754 -27.7424 c -0.6872 -4.3954 -3.2779 -5.4255 -10.4523 10.8951 c -6.5545 2.9003 -5.7125 -3.4678 -4.2315 6.1033 l -27.7424 0.5754 c -4.3954 0.6872 -5.4255 3.2779 10.8951 10.4523 c 2.9003 6.5545 -3.4678 5.7125 6.1033 4.2315 l 0.5754 27.7424 c 0.6872 4.3954 3.2779 5.4255 10.4523 -10.8951 c 6.5545 -2.9003 5.7125 3.4678 4.2315 -6.1033 l 27.7424 -0.5754 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e29" name="AKT{p}" refUnificationXrefID="ref167;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m32">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="1001.0" y="909.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="22.0" outlineColor="0 0 0 0" width="22.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_2246f4" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#2246f4;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_2246f4);stroke:none;" d="M 60 42.4263 c 4.3954 -0.6872 5.4255 -3.2779 -10.8951 -10.4523 c -2.9003 -6.5545 3.4678 -5.7125 -6.1033 -4.2315 l -0.5754 -27.7424 c -0.6872 -4.3954 -3.2779 -5.4255 -10.4523 10.8951 c -6.5545 2.9003 -5.7125 -3.4678 -4.2315 6.1033 l -27.7424 0.5754 c -4.3954 0.6872 -5.4255 3.2779 10.8951 10.4523 c 2.9003 6.5545 -3.4678 5.7125 6.1033 4.2315 l 0.5754 27.7424 c 0.6872 4.3954 3.2779 5.4255 10.4523 -10.8951 c 6.5545 -2.9003 5.7125 3.4678 4.2315 -6.1033 l 27.7424 -0.5754 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e30" name="Src kinase inhibitor" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m33">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="922.0" y="907.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="26.913002806361092" outlineColor="0 0 0 0" resourceID="36" width="11.662301216089803"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e31" name="AP-1" refUnificationXrefID="ref168;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m34">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="546.0" y="726.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="20.0" outlineColor="0 0 0 0" width="20.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_88f3ed" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#88f3ed;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 60 28.5137 c -11.7301 -4.4713 -14.7938 -9.1466 -7.4546 -19.3474 l -40.1292 -9.1662 c 2.1343 12.7789 -0.2349 17.8706 -12.4162 16.3742 l 12.4162 40.6526 c 9.5957 -8.3076 15.0287 -8.7241 19.8708 2.9732 l 27.713 -31.4863 z" style="fill:url(#MO_88f3ed);stroke:none;"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e32" name="AP-1{active}" refUnificationXrefID="ref169;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m35">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="686.0" y="894.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="20.0" outlineColor="0 0 0 0" width="20.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" viewBox="0 0 60.0 60.0" height="60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_88f3ed" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" cy="50%" fy="50%" xlink:actuate="onLoad"&gt;
&lt;stop style="stop-color:white;stop-opacity:1;" offset="0%"/&gt;
&lt;stop style="stop-color:#88f3ed;stop-opacity:1;" offset="0%"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path d="M 60 28.5137 c -11.7301 -4.4713 -14.7938 -9.1466 -7.4546 -19.3474 l -40.1292 -9.1662 c 2.1343 12.7789 -0.2349 17.8706 -12.4162 16.3742 l 12.4162 40.6526 c 9.5957 -8.3076 15.0287 -8.7241 19.8708 2.9732 l 27.713 -31.4863 z" style="fill:url(#MO_88f3ed);stroke:none;"/&gt;
&lt;/svg&gt;
</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e33" name="Cytokine/Chemokine" type="cso30:c:mRNA">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m36">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="734.0" y="1156.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="23.335640138408305" outlineColor="0 0 0 0" resourceID="37" width="43.75432525951557"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e34" name="Cytokine/Chemokine" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m37">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="1181.0" y="1103.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="16.439999999999998" outlineColor="0 0 0 0" resourceID="34" width="21.92"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Extracellular"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e35" name="ssRNA" type="cso30:c:Rna">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m38">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="458.0" y="284.5"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="31.0" outlineColor="0 0 0 0" resourceID="53" width="60.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e36" name="Poly(I:C)" type="cso30:c:SmallMolecule">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m39">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="576.0" y="234.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="27.708999158957106" outlineColor="0 0 0 0" resourceID="65" width="48.89823380992431"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e37" name="DDX58:dsRNA" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m40">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="312.5" y="386.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="27.515414097650396" outlineColor="0 0 0 0" resourceID="12" width="22.470921513081155"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e38" name="DDX58:ssRNA" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m41">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="432.5" y="418.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="27.515414097650396" outlineColor="0 0 0 0" resourceID="12" width="22.470921513081155"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e39" name="IFIH1:Poly(I:C)" type="cso30:c:Complex">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m42">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="596.5" y="394.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="27.515414097650396" outlineColor="0 0 0 0" resourceID="12" width="22.470921513081155"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="G010228" name="IFN-beta" refUnificationXrefID="ref170;ref171;" type="cso30:c:mRNA">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m93217">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="690.0" y="1222.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="28.0" outlineColor="0 0 0 0" width="28.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;&lt;linearGradient xmlns:xlink="http://www.w3.org/1999/xlink" gradientTransform="" gradientUnits="objectBoundingBox" id="id_#ffd30f" spreadMethod="pad" x1="0%" x2="100%" y1="0%" y2="0%"&gt;&lt;stop offset="0%" style="stop-color:#ffd30f;stop-opacity:1;"/&gt;&lt;stop offset="100%" style="stop-color:#ffd30f;stop-opacity:1;"/&gt;&lt;/linearGradient&gt;&lt;linearGradient xmlns:xlink="http://www.w3.org/1999/xlink" gradientTransform="" gradientUnits="objectBoundingBox" id="id_#28163F" spreadMethod="pad" x1="0%" x2="100%" y1="0%" y2="0%"&gt;&lt;stop offset="0%" style="stop-color:#28163F;stop-opacity:1;"/&gt;&lt;stop offset="100%" style="stop-color:#28163F;stop-opacity:1;"/&gt;&lt;/linearGradient&gt;&lt;/defs&gt;&lt;polygon style="fill:url(#id_#28163F);stroke:none;" points="0,60 5.4121,55.4096 5.7389,55.06 6.0446,54.4747 6.3308,53.669 6.5988,52.6597 6.85,51.4625 7.086,50.0951 7.3084,48.5725 7.5185,46.9122 7.7176,45.1294 7.9075,43.2418 8.0893,41.2648 8.2647,39.2155 8.4352,37.1098 8.6021,34.9635 8.7669,32.7941 8.9312,30.6181 9.0962,28.4512 9.2635,26.3088 9.4348,24.2093 9.6113,22.1683 9.7943,20.2017 9.9856,18.3261 10.1866,16.5582 10.3987,14.9142 10.6231,13.4103 10.8617,12.0629 11.1155,10.8889 11.3866,9.9046 11.6759,9.1255 11.9852,8.5686 12.3157,8.2502 12.6689,8.1875 13.026,8.3869 13.3701,8.8365 13.702,9.519 10.3627,2.6373 9.9474,1.7838 9.5171,1.2214 9.0714,0.9722 8.6295,1.0511 8.2163,1.4488 7.8298,2.1448 7.4682,3.1188 7.1295,4.3492 6.812,5.8167 6.5139,7.5009 6.2331,9.3809 5.9681,11.4358 5.717,13.646 5.4777,15.9899 5.2488,18.4483 5.0285,20.9998 4.8145,23.6243 4.6051,26.3015 4.3989,29.0108 4.1935,31.7312 3.9875,34.443 3.7788,37.1246 3.5658,39.7578 3.3465,42.319 3.1191,44.7906 2.8818,47.1504 2.633,49.3783 2.3703,51.4539 2.0924,53.3568 1.7973,55.0662 1.4832,56.5624 1.1482,57.8244 0.7907,58.8315 0.4085,59.5636" /&gt;&lt;polygon style="fill:url(#id_#ffd30f);stroke:none;" points="10.3627,2.6373 13.702,9.519 14.0227,10.4186 14.3318,11.5175 14.6304,12.7984 14.9186,14.2465 15.197,15.8431 15.4659,17.5716 15.726,19.4163 15.9776,21.3597 16.2211,23.3859 16.4571,25.4767 16.6861,27.6164 16.9084,29.7868 17.1245,31.9728 17.335,34.1571 17.5402,36.3224 17.7404,38.4523 17.9361,40.5304 18.1283,42.5388 18.3167,44.4618 18.5024,46.2823 18.6855,47.9831 18.8666,49.5479 19.0458,50.9596 19.2242,52.2015 19.4018,53.2575 19.579,54.1096 19.7564,54.7419 19.9346,55.1368 20.114,55.2787 20.3337,55.1534 20.5441,54.7661 18.9149,59.196 18.6519,59.6798 18.3775,59.8366 18.1532,59.6598 17.9304,59.1655 17.7086,58.3754 17.4871,57.3097 17.265,55.9903 17.0423,54.4377 16.818,52.6729 16.5919,50.717 16.3629,48.5909 16.1309,46.3156 15.8951,43.9118 15.6551,41.4012 15.4103,38.8036 15.1599,36.141 14.9033,33.4344 14.6407,30.7043 14.3704,27.9718 14.0925,25.258 13.8063,22.5839 13.5114,19.9701 13.2069,17.438 12.8924,15.009 12.5674,12.7032 12.2313,10.5418 11.883,8.5458 11.5229,6.7363 11.1497,5.1345 10.7633,3.7615" /&gt;&lt;polygon style="fill:url(#id_#ffd30f);stroke:none;" points="56.1668,56.8968 50.3457,52.9266 50.4902,52.9972 50.63,53.0141 50.7648,52.982 50.8965,52.9024 51.0238,52.7798 51.1481,52.6161 51.2686,52.4147 51.3872,52.1783 51.5027,51.9101 51.6164,51.6134 51.7283,51.2895 51.8385,50.9434 51.9478,50.5768 52.0561,50.1937 52.1639,49.7964 52.2717,49.3876 52.3797,48.9706 52.4881,48.5483 52.5974,48.1236 52.7074,47.7 52.8194,47.2798 52.9331,46.8666 53.049,46.4623 53.1667,46.0709 53.2883,45.6943 53.4119,45.3375 60,47.4093 59.8448,47.8561 59.6937,48.3264 59.5458,48.8158 59.4014,49.3208 59.2591,49.8379 59.1195,50.3633 58.9816,50.8925 58.845,51.4238 58.7092,51.9512 58.5744,52.4725 58.4398,52.9833 58.305,53.4804 58.1698,53.9597 58.033,54.4173 57.8951,54.8499 57.7555,55.2542 57.6133,55.6255 57.4686,55.9613 57.3209,56.2565 57.1694,56.5081 57.0146,56.713 56.8554,56.8663 56.6913,56.9653 56.5224,57.0062 56.3475,56.984" /&gt;&lt;polygon style="fill:url(#id_#28163F);stroke:none;" points="51.4421,42.8884 46.5659,41.7203 46.7028,41.8023 46.8376,41.9525 46.9702,42.1664 47.1013,42.4378 47.231,42.761 47.3586,43.131 47.485,43.5425 47.6101,43.9887 47.7331,44.4656 47.8552,44.9675 47.9761,45.488 48.0958,46.0228 48.2148,46.5658 48.3322,47.1106 48.4494,47.6533 48.5655,48.188 48.6806,48.7082 48.795,49.2094 48.9091,49.6863 49.0228,50.1321 49.1361,50.5433 49.2485,50.9129 49.3616,51.2355 49.5412,51.6837 49.7141,52.0613 49.8808,52.3714 50.0415,52.6172 50.1962,52.8009 50.3457,52.9266 56.1668,56.8968 55.98,56.7393 55.7863,56.5095 55.5857,56.2025 55.3774,55.8145 55.1615,55.3428 54.9367,54.7828 54.796,54.3789 54.6547,53.9171 54.5133,53.4035 54.3712,52.8463 54.2288,52.2499 54.0854,51.6235 53.9414,50.9728 53.7963,50.3052 53.6505,49.6264 53.503,48.9453 53.3548,48.2666 53.2051,47.5986 53.0539,46.9476 52.9015,46.3204 52.7472,45.7241 52.5913,45.1661 52.4332,44.6518 52.2736,44.1894 52.1118,43.7852 51.9481,43.446 51.7817,43.1788 51.6129,42.9908" /&gt;&lt;polygon style="fill:url(#id_#ffd30f);stroke:none;" points="46.5072,55.376 42.6178,51.7104 42.8505,51.8235 43.0946,51.7695 43.3515,51.5269 43.6224,51.0766 43.9089,50.3965 44.2118,49.4669 44.5328,48.2673 44.873,46.7766 45.2338,44.9751 45.3918,44.1922 45.5468,43.528 45.6996,42.976 45.85,42.5312 45.9977,42.1879 46.143,41.9407 46.2862,41.784 46.4271,41.7127 46.5659,41.7203 51.4421,42.8884 51.2686,42.8787 51.0923,42.968 50.9139,43.1639 50.7321,43.473 50.5475,43.9021 50.3595,44.4587 50.1684,45.1481 49.9745,45.9788 49.7769,46.9562 49.326,49.2087 48.9008,51.0721 48.4993,52.5718 48.1208,53.7337 47.7629,54.5837 47.4244,55.1469 47.103,55.4494 46.7979,55.5179" /&gt;&lt;polygon style="fill:url(#id_#28163F);stroke:none;" points="42.7693,45.6178 39.6278,43.9039 39.843,44.061 40.0506,44.359 40.2515,44.7778 40.4475,45.2963 40.6388,45.8933 40.828,46.5502 41.015,47.2449 41.2027,47.9575 41.3909,48.6667 41.5816,49.3527 41.7764,49.9943 41.9763,50.5717 42.182,51.0638 42.3954,51.4504 42.6178,51.7104 46.5072,55.376 46.2289,55.0506 45.9622,54.5678 45.7048,53.9528 45.4555,53.2308 45.2122,52.4285 44.9734,51.5712 44.7381,50.6848 44.5038,49.7943 44.2696,48.9259 44.0336,48.1049 43.7941,47.358 43.5493,46.7098 43.2981,46.1868 43.0389,45.814" /&gt;&lt;polygon style="fill:url(#id_#ffd30f);stroke:none;" points="37.2968,58.9458 35.2497,54.5661 35.4034,54.8741 35.5619,55.0825 35.7257,55.1839 35.8945,55.1721 36.0692,55.0399 36.2492,54.781 36.4354,54.3885 36.6279,53.8562 36.8266,53.1772 37.0321,52.3448 37.2442,51.3518 37.4635,50.1923 37.789,48.4808 38.0959,47.0746 38.3862,45.9539 38.6604,45.0973 38.9205,44.4843 39.1677,44.0949 39.403,43.9084 39.6278,43.9039 42.7693,45.6178 42.4887,45.6233 42.1944,45.857 41.8857,46.3439 41.5604,47.1099 41.2175,48.1807 40.8548,49.5814 40.4708,51.339 40.0643,53.4783 39.7901,54.9278 39.5249,56.1689 39.2682,57.2097 39.0199,58.059 38.7793,58.7239 38.5464,59.214 38.3212,59.5379 38.103,59.7034 37.8918,59.7179 37.6872,59.5912 37.4889,59.331" /&gt;&lt;polygon style="fill:url(#id_#28163F);stroke:none;" points="18.9149,59.196 20.5441,54.7661 20.7465,54.1348 20.9416,53.2765 21.1309,52.2081 21.3148,50.9479 21.4944,49.5115 21.6709,47.9184 21.845,46.1844 22.0182,44.3275 22.1908,42.3647 22.3646,40.3133 22.5398,38.1907 22.7176,36.0147 22.8994,33.8023 23.0856,31.5706 23.2776,29.3372 23.4763,27.1193 23.6825,24.9344 23.8976,22.7999 24.122,20.7326 24.3571,18.7501 24.604,16.87 24.8633,15.1097 25.136,13.4858 25.4234,12.0162 25.7263,10.7186 26.0457,9.6097 26.3825,8.7074 26.7381,8.028 27.1129,7.5891 27.5082,7.4095 27.811,7.4389 28.1009,7.5919 28.3782,7.8622 28.6434,8.2436 28.897,8.7289 29.1391,9.3117 29.3705,9.9866 29.5914,10.746 29.8025,11.5843 30.0038,12.4942 30.1959,13.4695 30.3792,14.5047 30.554,15.5915 30.7211,16.7254 30.8809,17.8987 31.0334,19.1055 31.1792,20.3387 31.3186,21.5923 31.4523,22.8601 31.5807,24.1355 31.7039,25.4116 31.8227,26.6825 31.9373,27.9413 32.0481,29.1818 32.1555,30.3977 32.26,31.5821 32.3622,32.7287 32.4623,33.8314 32.5607,34.8832 32.6577,35.878 32.7541,36.809 32.8501,37.6701 32.9535,38.5773 33.0575,39.5183 33.162,40.4857 33.2674,41.4735 33.3736,42.4744 33.4814,43.4823 33.5907,44.4902 33.7016,45.4922 33.8144,46.48 33.9295,47.4484 34.0471,48.3901 34.1672,49.2987 34.2902,50.1671 34.4164,50.9887 34.5457,51.7574 34.6785,52.4656 34.8151,53.1072 34.9556,53.6756 35.1004,54.1643 35.2497,54.5661 37.2968,58.9458 37.1103,58.4435 36.9294,57.833 36.7537,57.1225 36.583,56.3202 36.4168,55.4348 36.2552,54.474 36.0976,53.4468 35.9439,52.3617 35.7939,51.2258 35.6469,50.049 35.5031,48.8383 35.3619,47.6034 35.2232,46.3512 35.0866,45.0914 34.952,43.8312 34.819,42.58 34.6873,41.3454 34.5565,40.1361 34.4267,38.9601 34.2976,37.8262 34.1775,36.7495 34.0572,35.5855 33.9356,34.3416 33.8127,33.0267 33.6876,31.6489 33.5602,30.2153 33.4294,28.735 33.295,27.2152 33.1565,25.665 33.0132,24.0912 32.8648,22.5026 32.7107,20.9077 32.5502,19.3136 32.3831,17.7291 32.2088,16.1615 32.0266,14.6203 31.836,13.1113 31.6365,11.6452 31.4275,10.2275 31.2089,8.869 30.9797,7.5753 30.7395,6.3559 30.4879,5.2186 30.2242,4.1706 29.9481,3.2212 29.6587,2.3781 29.356,1.6492 29.0392,1.0425 28.7077,0.5659 28.3609,0.2281 27.9986,0.0363 27.6202,0 27.1258,0.225 26.6575,0.7729 26.2132,1.6219 25.7921,2.7505 25.3928,4.1367 25.0141,5.7586 24.6548,7.5957 24.3139,9.6253 23.9898,11.8255 23.6812,14.1759 23.3874,16.6537 23.1069,19.2378 22.8382,21.9059 22.5802,24.6374 22.3321,27.4097 22.092,30.2018 21.8591,32.9911 21.6319,35.7565 21.4095,38.4765 21.1904,41.1298 20.9735,43.6941 20.7575,46.1473 20.5414,48.4687 20.3235,50.636 20.1028,52.6279 19.8782,54.4228 19.6482,55.9983 19.412,57.3339 19.168,58.4069" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e40" name="IFN-alpha" type="cso30:c:mRNA">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m43">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="505.0" y="1184.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="24.41522491349481" outlineColor="0 0 0 0" resourceID="37" width="45.77854671280277"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="MO000016660" name="IFNbeta" refUnificationXrefID="ref172;ref173;" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m1636">
<csml:parameter key="csml-variable:parameter:initialValue" value="10"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="86.0" y="1166.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="internal" height="20.0" outlineColor="0 0 0 0" width="20.0">&lt;svg contentScriptType="text/ecmascript" width="60.0" xmlns:xlink="http://www.w3.org/1999/xlink" zoomAndPan="magnify" style="overflow:visible;enable-background:new 0 0 60.0 60.0" contentStyleType="text/css" height="60.0" viewBox="0 0 60.0 60.0" preserveAspectRatio="xMidYMid meet" xmlns="http://www.w3.org/2000/svg" version="1.0"&gt;
&lt;defs&gt;
&lt;radialGradient id="MO_da6342" gradientUnits="objectBoundingBox" spreadMethod="pad" xlink:show="other" xlink:type="simple" r="50%" cx="50%" fx="50%" fy="50%" cy="50%" xlink:actuate="onLoad"&gt;
&lt;stop offset="0%" style="stop-color:white;stop-opacity:1;"/&gt;
&lt;stop offset="100%" style="stop-color:#da6342;stop-opacity:1;"/&gt;
&lt;/radialGradient&gt;
&lt;/defs&gt;
&lt;path style="fill:url(#MO_da6342);stroke:none;" d="M 60 48.5413 l -0 -37.0821 l -37.0821 -11.4591 l -22.9179 30 l 22.9179 30 l 37.0821 -11.4591 z" /&gt;
&lt;/svg&gt;</csml:image>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_CellComponent"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e41" name="IFNalpha" type="cso30:c:Protein">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m44">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="false"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="104.0" y="1030.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="36.06173994387278" outlineColor="0 0 0 0" resourceID="36" width="15.626753975678204"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Extracellular"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e4" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m4">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="220.27314478103264" y="163.64105135799582"/>
<csml:shape depth="71" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1320.4676320542158" outlineColor="0 0 0 0" resourceID="20066" width="871.7841445603844"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_PlasmaMembrane_InternalSideOfPlasmaMembrane_"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e3" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m3">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="183.8668091729803" y="129.20262578281157"/>
<csml:shape depth="71" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1389.3444832045857" outlineColor="0 0 0 0" resourceID="20065" width="944.5968157764885"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e2" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m2">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="164.1877088443035" y="109.5235254541347"/>
<csml:shape depth="71" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1428.7026838619383" outlineColor="0 0 0 0" resourceID="20064" width="983.9550164338423"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_PlasmaMembrane_ExternalSideOfPlasmaMembrane_"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e1" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m1">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="164.1877088443035" y="109.5235254541347"/>
<csml:shape depth="81" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="1428.7026838619383" outlineColor="0 0 0 0" resourceID="20003" width="983.9550164338423"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_PlasmaMembrane"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e58" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m58">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="699.2618206328057" y="1248.96104143149"/>
<csml:shape depth="40" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="75.75750103832438" outlineColor="0 0 0 0" resourceID="20062" width="83.6856116121024"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleolus"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e55" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m55">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="431.46786347407743" y="949.4546419776497"/>
<csml:shape depth="70" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="428.9988721588833" outlineColor="0 0 0 0" resourceID="20025" width="473.0439309020946"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleus"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e51" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m51">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="482.5601316162029" y="959.621291581553"/>
<csml:shape depth="50" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="415.7853545359195" outlineColor="0 0 0 0" resourceID="20021" width="276.60296890737004"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearPore"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e52" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m52">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="437.6341716981271" y="955.1804996142671"/>
<csml:shape depth="50" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="417.54715688564795" outlineColor="0 0 0 0" resourceID="20110" width="460.7113144539955"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearInnerMembrane"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e56" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m56">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="438.5150728729913" y="956.0614007891311"/>
<csml:shape depth="50" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="415.7853545359195" outlineColor="0 0 0 0" resourceID="20063" width="458.9495121042668"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e59" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m59">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="431.46786347407743" y="949.4546419776497"/>
<csml:shape depth="60" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="428.9988721588833" outlineColor="0 0 0 0" resourceID="20022" width="473.0439309020946"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearEnvelope"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e60" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m60">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="542.9616563527063" y="1140.0981959181931"/>
<csml:shape depth="30" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="7.212884479486217" outlineColor="0 0 0 0" resourceID="20043" width="14.980606226625204"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Chromatin"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e61" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m61">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="542.461411506971" y="1118.5876675515826"/>
<csml:shape depth="40" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="92.295174038134" outlineColor="0 0 0 0" resourceID="20114" width="51.27509668785222"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearChromosome"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e62" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m62">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="563.9719398735826" y="1178.6170490398001"/>
<csml:shape depth="30" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="8.003917531762294" outlineColor="0 0 0 0" resourceID="20115" width="8.003917531762289"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearCentromere"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e57" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m57">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="776.7811240208579" y="1125.6348769504966"/>
<csml:shape depth="40" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="26.753410177287794" outlineColor="0 0 0 0" resourceID="20117" width="29.553185660957414"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearBody"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e53" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m53">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="438.5150728729913" y="956.0614007891311"/>
<csml:shape depth="60" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="415.7853545359195" outlineColor="0 0 0 0" resourceID="20113" width="458.9495121042668"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearLumen"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e54" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m54">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="431.46786347407743" y="949.4546419776497"/>
<csml:shape depth="50" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="428.9988721588833" outlineColor="0 0 0 0" resourceID="20111" width="473.0439309020946"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearOuterMembrane"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e50" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m50">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="431.46786347407743" y="949.4546419776497"/>
<csml:shape depth="50" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="428.9988721588833" outlineColor="0 0 0 0" resourceID="20112" width="473.0439309020946"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_NuclearEnvelopeLumen"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e5" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m5">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="704.6984241366887" y="288.0"/>
<csml:shape depth="60" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="463.8856313883143" outlineColor="0 0 0 0" resourceID="20048" width="277.86042895340637"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_EndosomeMembrane"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e6" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m6">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="704.6984241366887" y="288.0"/>
<csml:shape depth="60" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="463.8856313883143" outlineColor="0 0 0 0" resourceID="20090" width="277.86042895340637"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_EndosomeLumen"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
<csml:entity id="e11" name="" type="cso30:c:EntityBiologicalCompartment">
<csml:entitySimulationProperty>
<csml:variable type="csml-variable:Double" variableID="m11">
<csml:parameter key="csml-variable:parameter:initialValue" value="0"/>
<csml:parameter key="csml-variable:parameter:maximumValue" value="infinite"/>
<csml:parameter key="csml-variable:parameter:minimumValue" value="0"/>
<csml:parameter key="csml-variable:parameter:global" value="true"/>
</csml:variable>
</csml:entitySimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="704.6984241366887" y="288.0"/>
<csml:shape depth="70" shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="system" fileType="resourceFile" height="463.8856313883143" outlineColor="0 0 0 0" resourceID="20010" width="277.86042895340637"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refCellComponentID="cso30:i:CC_Endosome"/>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:entity>
</csml:entitySet>
<csml:processSet>
<csml:process id="p1" name="p1" type="cso30:c:ProcessBiological">
<csml:connector id="c1" name="c1" refID="MO000022224" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="689.0" y="84.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="689.0 84.0 754.0 84.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="754.0 81.0 754.0 87.0 762.0 84.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c2" name="c2" refID="MO000018132" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="734.0" y="99.26258603804887"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="734.0 132.0 760.0220469953971 99.26258603804887" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="757.6735772311288 97.39585366132276 762.3705167596654 101.12931841477497 765.0 93.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c3" name="c3" refID="e12" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="780.0" y="93.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="780.0 93.0 813.6935398854732 131.01322448617486" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="815.9385807031576 129.0233019432273 811.4484990677888 133.0031470291224 819.0 136.99999999999997" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="762.0" y="74.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679,16473828
A recent study demonstrated that CD14 enhances dsRNA-mediated TLR3 activation by directly binding to poly(I:C) and mediating cellular uptake of poly(I:C)
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p2" name="p2" type="cso30:c:ProcessBiological">
<csml:connector id="c4" name="c4" refID="e12" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="828.0" y="160.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="828.0 160.0 828.0 206.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="831.0 206.0 825.0 206.0 828.0 214.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c5" name="c5" refID="e13" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="831.0" y="233.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="831.0 233.0 853.3429990446087 296.45411728668876" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="856.1727050621005 295.457741928417 850.513293027117 297.4504926449605 856.0 304.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="818.0" y="214.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10071" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Internalization" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 16473828
A recent study demonstrated that CD14 enhances dsRNA-mediated TLR3 activation by directly binding to poly (I: C) and mediating cellular uptake of poly (I: C)

PMID: 182626279
The internalized poly(I:C) colocalizes with CD14 and TLR3. 
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p3" name="p3" type="cso30:c:ProcessBiological">
<csml:connector id="c6" name="c6" refID="MO000019398" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="741.0" y="287.1143318680631"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="741.0 313.0 762.8410324863218 287.1143318680631" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="760.5481580357981 285.1797190504338 765.1339069368455 289.0489446856925 768.0 281.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c7" name="c7" refID="e13" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="792.1117964514128" y="280.6636527173945"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="851.0 311.0 792.1117964514128 280.6636527173945" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="790.7379266823899 283.3305763866743 793.4856662204357 277.9967290481147 785.0 277.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c8" name="c8" refID="MO000041446" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="745.2987830845308" y="281.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="773.0 281.0 745.2987830845308 373.3373897182308" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="748.1722619401943 374.1994333749298 742.4253042288674 372.47534606153175 743.0000000000001 381.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c9" name="c9" refID="MO000018132" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="732.0072641641785" y="163.41325584657966"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="772.0 262.0 732.0072641641785 163.41325584657966" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="729.2272932217112 164.54097990814662 734.787235106646 162.28553178501272 729.0 156.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="766.0" y="262.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679,15644310
Since the extracellular domain of CD14 consists of LRRs,poly(I:C) might be transferred from CD14 to TLR3.

PMID: 182626279,11607032,16225392
TLR3 recognizes both in vitro-transcribed dsRNA and poly(I:C), suggesting that the RNA duplex and not 5′-triphosphate is critical for TLR3 activation</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p4" name="p4" type="cso30:c:ProcessBiological">
<csml:connector id="c10" name="c10" refID="MO000041446" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="740.0" y="403.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="740.0 403.0 740.0 435.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="743.0 435.0 737.0 435.0 740.0 443.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c11" name="c11" refID="e14" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="740.0" y="460.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="740.0 460.0 740.0 484.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="743.0 484.0 737.0 484.0 740.0 492.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="731.0" y="443.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="17.0" outlineColor="0 0 0 0" resourceID="10017" width="17.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Dimerization" refCellComponentID="cso30:i:CC_EndosomeLumen"/>
<csml:comments>
<csml:comment type="text">PMID: 182626279
Once TLR3 is dimerized by internalized dsRNA, it recruits the adaptor protein TICAM-1/TRIF</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p5" name="p5" type="cso30:c:ProcessBiological">
<csml:connector id="c12" name="c12" refID="MO000041125" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="619.8848002049721" y="576.7748008455096"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="626.0 602.0 619.8848002049721 576.7748008455096" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="616.9692498879059 577.4816009223741 622.8003505220381 576.0680007686451 618.0 569.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c17" name="c17" refID="e16" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="633.0" y="560.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="727.0 560.0 633.0 560.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="633.0 563.0 633.0 557.0 625.0 560.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c15" name="c15" refID="MO000041437" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="625.0" y="566.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="625.0 566.0 752.4277639430558 654.4386719903298" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="754.1382619466821 651.9740834689757 750.7172659394294 656.9032605116838 759.0 659.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="606.0" y="550.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 182626279
Once TLR3 is dimerized by internalized dsRNA, it recruits the adaptor protein TICAM-1/TRIF

PMID: 18262679,12855817
TLR3 mediates signals via the adaptor protein TICAM-1/TRIF


</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p6" name="p6" type="cso30:c:ProcessBiological">
<csml:connector id="c18" name="c18" refID="MO000041437" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="763.6132233653639" y="628.8356563460532"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="769.0 655.0 763.6132233653639 628.8356563460532" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="760.6748522355939 629.4406151080647 766.5515944951338 628.2306975840418 762.0 621.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c16" name="c16" refID="MO000041125" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="646.0" y="612.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="750.0 612.0 646.0 612.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="646.0 615.0 646.0 609.0 638.0 612.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c19" name="c19" refID="e16" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="744.2926937794119" y="578.2909647972695"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="755.0 602.0 744.2926937794119 578.2909647972695" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="741.5585819804359 579.525724964549 747.0268055783879 577.05620462999 740.9999999999999 571.0000000000001" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="750.0" y="602.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10018" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Dissociation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679
After the transient association of TLR3 with TICAM-1 through the TIR domains, TICAM-1 dissociates from TLR3 to form a speckle-like structure containing RIP1, TRAF3 and NAP1 where TICAM-1-mediated signaling is initiated.</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p7" name="p7" type="cso30:c:ProcessBiological">
<csml:connector id="c13" name="c13" refID="e14" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="686.0" y="504.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="731.0 504.0 686.0 504.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="686.0 507.0 686.0 501.0 678.0 504.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c14" name="c14" refID="e16" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="678.0" y="512.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="678.0 512.0 720.8027103988599 546.9409880807019" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="722.6998398685967 544.6170044802743 718.9055809291231 549.2649716811294 727.0 552.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="657.0" y="493.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10001" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Phosphorylation" refCellComponentID="cso30:i:CC_EndosomeLumen"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679,15502848
In addition, phosphorylation of two specific tyrosine residues (Tyr759 and Tyr858) in the TIR domain of TLR3 is essential for dsRNA-induced signaling</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p8" name="p8" type="cso30:c:ProcessBiological">
<csml:connector id="c20" name="c20" refID="MO000041125" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="373.0" y="612.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="618.0 612.0 373.0 612.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="373.0 615.0 373.0 609.0 365.0 612.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c21" name="c21" refID="MO000000065" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="330.0" y="573.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="330.0 573.0 344.615789941513 595.3083109633619" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="347.12517333025227 593.6642321914293 342.10640655277376 596.9523897352946 349.0 601.9999999999999" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c22" name="c22" refID="e17" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="356.0" y="621.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="356.0 621.0 356.0 666.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="359.0 666.0 353.0 666.0 356.0 674.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="346.0" y="602.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID:18262679
After the transient association of TLR3 with TICAM-1 through the TIR domains, TICAM-1 dissociates from TLR3 to form a speckle-like structure containing RIP1, TRAF3 and NAP1 where TICAM-1-mediated signaling is initiated.

PMID: 18262679
RIP1 associates with TICAM-1 via the PHIM domain in the C-terminal region and acts as an NF-κB activator and apoptosis mediator in TICAM-1-mediated signaling.

PMID: 18262679,15814722,15064760,14739303
Receptor-interacting protein 1 (RIP1), a kinase containing a death domain, associates with TICAM-1 via the RIP homotypic interaction motif (RHIM) domain in the C-terminal region and acts as an NF-κB inducer and apoptosis mediator in TICAM-1-mediated signaling</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p9" name="p9" type="cso30:c:ProcessBiological">
<csml:connector id="c23" name="c23" refID="MO000041125" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="509.77665766858627" y="583.8771242648312"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="618.0 610.0 509.77665766858627 583.8771242648312" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="509.0727360692746 586.793370890551 510.48057926789795 580.9608776391113 502.0 582.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c24" name="c24" refID="MO000016963" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="492.0" y="521.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="492.0 521.0 492.0 561.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="495.0 561.0 489.0 561.0 492.0 569.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c25" name="c25" refID="e18" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="412.0" y="533.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="412.0 533.0 474.1225297966015 569.9133872704443" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="475.65500957018486 567.3343359441699 472.59005002301814 572.4924385967188 481.0 573.9999999999999" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c26" name="c26" refID="e19" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="477.4133125023502" y="590.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="490.0 590.0 477.4133125023502 660.125830344049" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="480.36612612333187 660.6558225324303 474.46049888136855 659.5958381556677 476.0 668.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="481.0" y="569.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10005" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID:18262679
After the transient association of TLR3 with TICAM-1 through the TIR domains, TICAM-1 dissociates from TLR3 to form a speckle-like structure containing RIP1, TRAF3 and NAP1 where TICAM-1-mediated signaling is initiated.

PMID: 18262679,16306937,16306936
In addition, TRAF3 is involved in the TLR3-TICAM-1-mediated IRF-3 activation

PMID: 18262679,15611223
It is reported that NF-κB activating kinase (NAK)-associated protein 1 (NAP1) participates in the recruitment of IRF-3 kinases to the N-terminal region of TICAM-1

PMID: 18262679
TRAF3 and NAP1 participate in the recruitment and activation of the IRF-3 kinases TBK1 and IKKvar epsilon. </csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p10" name="p10" type="cso30:c:ProcessBiological">
<csml:connector id="c27" name="c27" refID="MO000041125" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="628.0" y="622.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="628.0 622.0 628.0 669.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="631.0 669.0 625.0 669.0 628.0 677.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c28" name="c28" refID="MO000000212" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="644.0402649471412" y="702.24549324357"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="714.0 763.0 644.0402649471412 702.24549324357" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="642.0732049808024 704.5105925987478 646.0073249134799 699.980393888392 638.0 697.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c29" name="c29" refID="e20" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="595.6580753813449" y="698.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="624.0 698.0 595.6580753813449 778.4544956916659" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="598.4876394969702 779.4512739596703 592.8285112657197 777.4577174236616 593.0 786.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="617.0" y="677.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10005" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679
TRAF6 directly binds to the N-terminal region of TICAM-1 through the TRAF domain

PMID: 18262679,14982987
Although TRAF6 is required for NF-κB activation in MEFs,poly(I:C)-induced NF-κB activation is not impaired in TRAF6-deficient macrophages</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p11" name="p11" type="cso30:c:ProcessBiological">
<csml:connector id="c30" name="c30" refID="e20" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="557.4050814913675" y="814.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="584.0 814.0 557.4050814913675 898.3700863032482" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="560.2662991276494 899.271991862511 554.5438638550855 897.4681807439854 555.0 906.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c31" name="c31" refID="MO000000058" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="311.0" y="882.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="311.0 882.0 534.0804040507106 913.8686291501015" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="534.5046681194226 910.898780669118 533.6561399819988 916.838477631085 542.0 915.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c32" name="c32" refID="e21" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="394.8725795113394" y="918.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="542.0 918.0 394.8725795113394 944.5778566044032" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="395.4058832846882 947.5300739211555 394.3392757379906 941.625639287651 387.0 946.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="542.0" y="906.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10003" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_UnknownActivation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679,14982987
Although TRAF6 is required for NF-κB activation in MEFs,poly(I:C)-induced NF-κB activation is not impaired in TRAF6-deficient macrophages</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p12" name="p12" type="cso30:c:ProcessBiological">
<csml:connector id="c33" name="c33" refID="e17" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="346.1676869865141" y="701.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="354.0 701.0 346.1676869865141 754.0856770914041" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="349.1355580772376 754.5235597113469 343.19981589579066 753.6477944714613 345.0 762.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c34" name="c34" refID="MO000000058" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="304.0" y="788.4043756496454"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="304.0 869.0 336.970937234236 788.4043756496454" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="334.1942963656189 787.2684771124839 339.74757810285297 789.5402741868069 340.0 781.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c49" name="c49" refID="e25" type="cso30:c:InputInhibitor">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="356.6066663260746" y="674.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<inhibitoryConnector depth="0" name="default" points="549.0 674.0 356.6066663260746 766.2702722721887" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<bioInhibitoryConnectorArrow pointsInAbsoluteCoordinate="359.6336898497444 772.5819383428193 353.57964280240486 759.958606201558 349.97297647633025 761.6883339293694 356.0270235236698 774.3116660706306" size="4.0 14.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c35" name="c35" refID="e21" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="346.0" y="781.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="346.0 781.0 372.5866874976498 929.125830344049" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="375.53950111863145 928.5958381556676 369.63387387666813 929.6558225324302 374.0 937.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="334.0" y="762.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10003" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_UnknownActivation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679
RIP1 associates with TICAM-1 via the PHIM domain in the C-terminal region and acts as an NF-κB activator and apoptosis mediator in TICAM-1-mediated signaling.

PMID: 18262679,15814722,15064760,14739303
Receptor-interacting protein 1 (RIP1), a kinase containing a death domain, associates with TICAM-1 via the RIP homotypic interaction motif (RHIM) domain in the C-terminal region and acts as an NF-κB inducer and apoptosis mediator in TICAM-1-mediated signaling

PMID: 18262679
SARM and TICAM-1 have been shown to interact and SARM strongly suppresses NF-κB activation as well as IRF-3 activation by TICAM-1.
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p13" name="p13" type="cso30:c:ProcessBiological">
<csml:connector id="c36" name="c36" refID="e17" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="146.5055000712813" y="692.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="345.0 692.0 146.5055000712813 765.2309805562263" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="147.54388236269642 768.0455430829568 145.46711777986616 762.4164180294958 139.0 768.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="116.0" y="760.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="23.0" outlineColor="0 0 0 0" resourceID="30009" width="23.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:CE_Apoptosis_InhibitionOfCellSurvival_" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679
RIP1 associates with TICAM-1 via the PHIM domain in the C-terminal region and acts as an NF-κB activator and apoptosis mediator in TICAM-1-mediated signaling.

PMID: 18262679,15814722,15064760,14739303
Receptor-interacting protein 1 (RIP1), a kinase containing a death domain, associates with TICAM-1 via the RIP homotypic interaction motif (RHIM) domain in the C-terminal region and acts as an NF-κB inducer and apoptosis mediator in TICAM-1-mediated signaling</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p14" name="p14" type="cso30:c:ProcessBiological">
<csml:connector id="c37" name="c37" refID="e19" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="477.0" y="708.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="477.0 708.0 486.980624822824 746.2590618208252" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="489.8834766400145 745.5017961293842 484.07777300563345 747.0163275122662 489.0 753.9999999999999" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c38" name="c38" refID="MO000019331" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="423.0" y="736.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="423.0 736.0 474.589636792362 756.9856149663846" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="475.7200311799678 754.2067287635203 473.4592424047562 759.7645011692489 482.0 760.0000000000001" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c39" name="c39" refID="MO000016608" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="419.0" y="769.5298221281347"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="419.0 788.0 474.4105336155959 769.5298221281347" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="473.4618503175454 766.6837722339832 475.35921691364643 772.3758720222862 482.0 767.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c40" name="c40" refID="e22" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="496.0" y="773.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="496.0 773.0 517.8788077265269 824.6339862346034" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="520.6410628885507 823.463539132051 515.1165525645032 825.8044333371558 521.0000000000001 832.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="482.0" y="754.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679
TRAF3 and NAP1 participate in the recruitment and activation of the IRF-3 kinases TBK1 and IKKvar epsilon. 

PMID: 18262679,12702806,12692549
Once TICAM-1 is oligomerized, the serine-threonine kinases, TANK-binding kinase 1 (TBK-1; also called NAK or T2K) and IκB kinase-related kinase var epsilon (IKK-var epsilon; also called IKK-i), are activated and phosphorylate IRF-3</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p15" name="p15" type="cso30:c:ProcessBiological">
<csml:connector id="c41" name="c41" refID="e22" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="538.0" y="848.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="538.0 848.0 702.0 848.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="702.0 845.0 702.0 851.0 710.0 848.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c42" name="c42" refID="MO000007694" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="734.5019571832863" y="800.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="765.0 800.0 734.5019571832863 832.1923785287534" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="736.6798152350038 834.2556124724857 732.3240991315689 830.129144585021 729.0000000000001 838.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c50" name="c50" refID="e25" type="cso30:c:InputInhibitor">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="571.0" y="680.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<inhibitoryConnector depth="0" name="default" points="571.0 680.0 708.3472523148735 835.0061847553571" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<bioInhibitoryConnectorArrow pointsInAbsoluteCoordinate="713.5864289929984 830.3638763063857 703.1080756367486 839.6484932043286 705.7608233218751 842.6423084489714 716.239176678125 833.3576915510286" size="4.0 14.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c43" name="c43" refID="MO000041456" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="729.0" y="851.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="729.0 851.0 805.3577128744693 874.634530175431" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="806.2447640586827 871.7686725033569 804.4706616902558 877.500387847505 813.0 877.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="710.0" y="838.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10001" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Phosphorylation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 12702806, 12692549
Once TICAM-1 is oligomerized, the serine-threonine kinases, TANK-binding kinase 1 (TBK-1; also called NAK or T2K) and IκB kinase-related kinase var epsilon (IKK-var epsilon; also called IKK-i), are activated and phosphorylate IRF-3

PMID: 18262679
SARM and TICAM-1 have been shown to interact and SARM strongly suppresses NF-κB activation as well as IRF-3 activation by TICAM-1.

</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p16" name="p16" type="cso30:c:ProcessBiological">
<csml:connector id="c44" name="c44" refID="MO000041456" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="790.465257030206" y="891.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="814.0 891.0 790.465257030206 916.1578286918489" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="792.6560712707627 918.2073000781761 788.2744427896494 914.1083573055216 785.0000000000001 922.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c45" name="c45" refID="e23" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="724.8632840217354" y="941.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="769.0 941.0 724.8632840217354 998.6479555634478" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="727.2453006854424 1000.4716870715986 722.4812673580283 996.8242240552971 720.0 1005.0000000000001" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="766.0" y="922.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10027" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translocation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679,11070172
Phosphoprylated IRF-3 translocates into the nucleus and induces IFN-beta gene transcription

PMID: 18262679
Phosphorylated IRF-3 translocates into the nucleus and together with NF-KappaB and AP-1 induces IFN-beta gene transcription.</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p17" name="p17" type="cso30:c:ProcessBiological">
<csml:connector id="c46" name="c46" refID="e24" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="560.0" y="453.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="560.0 453.0 560.0 506.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="563.0 506.0 557.0 506.0 560.0 514.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c47" name="c47" refID="MO000041125" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="571.8732413079431" y="539.3444084952466"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="620.0 602.0 571.8732413079431 539.3444084952466" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="569.4940881222257 541.1718739857253 574.2523944936606 537.516943004768 567.0000000000001 533.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c48" name="c48" refID="e25" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="560.0" y="533.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="560.0 533.0 560.0 646.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="563.0 646.0 557.0 646.0 560.0 654.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="550.0" y="514.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679
SARM and TICAM-1 have been shown to interact and SARM strongly suppresses NF-κB activation as well as IRF-3 activation by TICAM-1.</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p18" name="p18" type="cso30:c:ProcessBiological">
<csml:connector id="c51" name="c51" refID="e21" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="387.0" y="959.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="387.0 959.0 428.34314575050763 1000.3431457505076" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="430.4644660940673 998.2218254069479 426.221825406948 1002.4644660940672 434.00000000000006 1005.9999999999999" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c52" name="c52" refID="e26" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="453.0" y="1024.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="453.0 1024.0 507.05364683002267 1072.6482821470204" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="509.06054102489003 1070.418399708279 505.0467526351553 1074.8781645857619 513.0 1078.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="434.0" y="1006.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10027" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translocation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679
Phosphorylated IRF-3 translocates into the nucleus and together with NF-κB and AP-1 induces IFN-beta gene transcription</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p19" name="p19" type="cso30:c:ProcessBiological">
<csml:connector id="c53" name="c53" refID="e26" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="534.0" y="1091.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="534.0 1091.0 616.3855340494335 1117.546449860373" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="617.3056153517937 1114.6910251289107 615.4654527470734 1120.4018745918356 624.0 1120.0000000000002" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c54" name="c54" refID="e23" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="647.6643604056492" y="1027.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="704.0 1027.0 647.6643604056492 1105.5004814019642" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="650.1016798799126 1107.2496165540826 645.2270409313858 1103.7513462498457 643.0 1112.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c55" name="c55" refID="MO000000276" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="584.0" y="1054.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="584.0 1054.0 622.2355301821389 1105.573505827071" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="624.6454654969872 1103.786829645373 619.8255948672904 1107.3601820087688 627.0 1112.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c92" name="c92" refID="G010228" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="642.0" y="1134.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="642.0 1134.0 690.8725873820297 1215.1469375399738" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="693.4424858045395 1213.5991578082348 688.3026889595199 1216.6947172717125 695.0 1221.9999999999998" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="624.0" y="1112.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="22.0" outlineColor="0 0 0 0" resourceID="10068" width="22.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679
Phosphorylated IRF-3 translocates into the nucleus and together with NF-kappaB and AP-1 induces IFN-beta gene transcription</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p20" name="p20" type="cso30:c:ProcessBiological">
<csml:connector id="c56" name="c56" refID="e16" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="745.0" y="560.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="745.0 560.0 790.0 560.0" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="790.0 557.0 790.0 563.0 798.0 560.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c57" name="c57" refID="MO000000030" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="824.886569358273" y="563.3423947843869"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="1005.0 594.0 824.886569358273 563.3423947843869" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="824.3831713141279 566.2998582937392 825.389967402418 560.3849312750344 817.0 562.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c58" name="c58" refID="e27" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="817.0" y="565.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="817.0 565.0 926.0984162392187 628.9542440023006" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="927.615574738356 626.3661500920076 924.5812577400815 631.5423379125936 933.0 633.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="798.0" y="550.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679
Phosphatidylinositol 3-kinase (PI3-K) is recruited to these residues, and is required for full phosphorylation and activation of IRF-3.</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p21" name="p21" type="cso30:c:ProcessBiological">
<csml:connector id="c59" name="c59" refID="e27" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="953.0" y="656.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="953.0 656.0 970.130511106479 686.9980677164858" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="972.7562357127969 685.5470093814155 967.5047865001612 688.4491260515562 974.0 694.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c60" name="c60" refID="MO000000085" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="923.0" y="719.3767371852321"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="923.0 779.0 968.1691384960363 719.3767371852321" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="965.7778620515743 717.5651641212456 970.5604149404984 721.1883102492184 973.0 712.9999999999999" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c61" name="c61" refID="e28" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="896.8989156063548" y="706.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="970.0 706.0 896.8989156063548 717.7322728039184" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="897.3743133048854 720.6943661563014 896.4235179078241 714.7701794515353 889.0 719.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="970.0" y="694.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679,16858407
TLR3 also associates with c-Src tyrosine kinase on the endosome in response to dsRNA</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p22" name="p22" type="cso30:c:ProcessBiological">
<csml:connector id="c62" name="c62" refID="e28" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="853.3254370185559" y="735.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="875.0 735.0 853.3254370185559 806.3454364805868" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="856.1958983383358 807.2174753625453 850.454975698776 805.4733975986284 851.0 814.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indierct</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c63" name="c63" refID="MO000007694" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="788.0" y="794.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="788.0 794.0 830.8445824720006 815.4222912360003" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="832.1862232585005 812.7390096630006 829.5029416855008 818.1055728090001 838.0 819.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c64" name="c64" refID="MO000041456" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="832.0769230769231" y="833.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="844.0 833.0 832.0769230769231 861.6153846153846" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="834.8461538461538 862.7692307692308 829.3076923076923 860.4615384615386 829.0 869.0000000000001" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="838.0" y="814.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10001" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Phosphorylation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">Phosphatidylinositol 3-kinase (PI3-K) is recruited to these residues, and is required for full phosphorylation and activation of IRF-3.

</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p23" name="p23" type="cso30:c:ProcessBiological">
<csml:connector id="c66" name="c66" refID="MO000000048" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="918.0" y="766.0167694794915"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="918.0 857.0 997.7275731365281 766.0167694794915" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="995.4712845817188 764.0396094056895 999.9838616913374 767.9939295532934 1003.0 760.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c65" name="c65" refID="e28" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="889.0" y="722.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="889.0 722.0 993.2227965086407 747.1251384440474" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="993.925869592123 744.2086871347876 992.5197234251585 750.0415897533071 1001.0 749.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c68" name="c68" refID="e30" type="cso30:c:InputInhibitor">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="934.0" y="763.5920564579087"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<inhibitoryConnector depth="0" name="default" points="934.0 909.0 1005.2401334132394 763.5920564579087" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<bioInhibitoryConnectorArrow pointsInAbsoluteCoordinate="998.9540346118991 760.5122899310776 1011.5262322145795 766.6718229847398 1013.2860988013401 763.0797665268311 1000.7139011986598 756.9202334731689" size="4.0 14.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c67" name="c67" refID="e29" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="1011.0" y="760.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="1011.0 760.0 1011.9463099339998 901.0001801659779" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="1014.9462423717581 900.9800463912278 1008.9463774962416 901.0203139407279 1012.0 908.9999999999999" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="1001.0" y="741.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10001" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Phosphorylation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679
The Src kinase inhibitor markedly inhibits dsRNA-elicited phosphorylation of Akt, a downstream target of PI3-K. </csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p24" name="p24" type="cso30:c:ProcessBiological">
<csml:connector id="c69" name="c69" refID="MO000041437" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="658.7645740721151" y="681.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="759.0 681.0 658.7645740721151 777.4529570249458" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="660.8447151877605 779.614672301989 656.6844329564698 775.2912417479026 653.0 783.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c70" name="c70" refID="e31" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="566.0" y="742.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="566.0 742.0 627.2834387427828 781.6539897747418" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="628.9131925772546 779.1352793032854 625.6536849083109 784.1727002461984 634.0 786.0000000000001" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c71" name="c71" refID="e32" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="648.0" y="801.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="648.0 801.0 687.6425839799225 886.7386118635534" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="690.36560453109 885.4795808560243 684.919563428755 887.9976428710823 690.9999999999999 894.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="634.0" y="782.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10003" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_UnknownActivation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679,12855817
This activates the transcription factors interferon regulatory factor 3 (IRF-3), NF-KappaB, and AP-1 (a complex of activating transcription factor 2 (ATF2) and JUN), leading to the induction of type I IFN (especially IFN-beta), cytokine/chemokine production and dendritic cell (DC) maturation</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p25" name="p25" type="cso30:c:ProcessBiological">
<csml:connector id="c72" name="c72" refID="e32" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="653.7611400011626" y="907.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="686.0 907.0 653.7611400011626 915.0597149997093" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="654.4887468762716 917.9701425001452 653.0335331260536 912.1492874992732 646.0 916.9999999999999" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c73" name="c73" refID="MO000000276" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="584.466355478943" y="930.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="631.0 930.0 584.466355478943 1026.7899806037985" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="587.1701127525185 1028.089863908402 581.7625982053675 1025.4900972991948 581.0 1034.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="625.0" y="909.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10027" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translocation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679
Phosphorylated IRF-3 translocates into the nucleus and together with NF-kappaB and AP-1 induces IFN-beta gene transcription</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p26" name="p26" type="cso30:c:ProcessBiological">
<csml:connector id="c75" name="c75" refID="e33" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="778.0" y="1120.9836729236984"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="778.0 1162.0 938.249836019039 1120.9836729236984" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="937.5059586726521 1118.077361430838 938.993713365426 1123.8899844165587 946.0000000000001 1119.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c76" name="c76" refID="e34" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="965.0" y="1112.1481227520483"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="965.0 1116.0 1173.0013713893989 1112.1481227520483" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="1172.9458253573807 1109.148637023073 1173.0569174214168 1115.1476084810238 1180.9999999999998 1112.0000000000002" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="946.0" y="1106.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10031" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 12855817
This activates the transcription factors interferon regulatory factor 3 (IRF-3), NF-KappaB, and AP-1 (a complex of activating transcription factor 2 (ATF2) and JUN), leading to the induction of type I IFN (especially IFN-beta), cytokine/chemokine production and dendritic cell (DC) maturation
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p27" name="p26" type="cso30:c:ProcessBiological">
<csml:connector id="c78" name="c78" refID="e33" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="778.0" y="1080.5777087639997"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="778.0 1157.0 930.8445824720006 1080.5777087639997" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="929.5029416855008 1077.894427191 932.1862232585005 1083.2609903369994 938.0 1077.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c79" name="c79" refID="e34" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="957.0" y="1073.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="957.0 1073.0 1173.106952191612 1108.696237638793" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="1173.5958630770647 1105.7363447106475 1172.6180413061595 1111.6561305669386 1181.0000000000002 1110.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="938.0" y="1062.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10031" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 12855817
This activates the transcription factors interferon regulatory factor 3 (IRF-3), NF-KappaB, and AP-1 (a complex of activating transcription factor 2 (ATF2) and JUN), leading to the induction of type I IFN (especially IFN-beta), cytokine/chemokine production and dendritic cell (DC) maturation
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p28" name="p26" type="cso30:c:ProcessBiological">
<csml:connector id="c81" name="c81" refID="e33" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="774.0" y="1031.3981843166116"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="774.0 1156.0 963.3174873949156 1031.3981843166116" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="961.6681682761862 1028.892242089705 964.9668065136449 1033.9041265435183 969.9999999999999 1027.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c82" name="c82" refID="e34" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="989.0" y="1024.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="989.0 1024.0 1173.6567671879156 1103.8255816489427" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="1174.847174069562 1101.0718693444112 1172.466360306269 1106.5792939534745 1180.9999999999998 1107.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="970.0" y="1010.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10031" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 12855817
This activates the transcription factors interferon regulatory factor 3 (IRF-3), NF-KappaB, and AP-1 (a complex of activating transcription factor 2 (ATF2) and JUN), leading to the induction of type I IFN (especially IFN-beta), cytokine/chemokine production and dendritic cell (DC) maturation
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p29" name="p29" type="cso30:c:ProcessBiological">
<csml:connector id="c83" name="c83" refID="MO000066987" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="295.79887605359005" y="262.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="306.0 262.0 295.79887605359005 306.204870434443" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="298.7220496406739 306.87944895453927 292.8757024665062 305.5302919143467 294.0 313.99999999999994" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c84" name="c84" refID="e15" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="308.13108104165445" y="259.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="419.0 259.0 308.13108104165445 315.3740265889893" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="309.49082107078345 318.0481819796097 306.7713410125254 312.6998711983689 301.0 319.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c85" name="c85" refID="e37" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="296.0" y="333.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="296.0 333.0 314.93297862686785 378.61126669199984" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="317.7037536173679 377.4611336770753 312.1622036363678 379.7613997069244 318.0 386.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="282.0" y="314.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679,17038590,17038589 
RIG-I and MDA5 recognize 5′-triphosphate-containing ssRNA/dsRNA and poly(I:C), respectively and induce IFN-alpha/beta production</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p30" name="p29" type="cso30:c:ProcessBiological">
<csml:connector id="c86" name="c86" refID="MO000066987" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="318.0" y="262.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="318.0 262.0 392.2000045312447 332.49000430468243" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="394.2662529169888 330.3150060038992 390.1337561455006 334.6650026054657 398.0 338.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c87" name="c87" refID="e35" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="423.85994340570034" y="316.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="462.0 316.0 423.85994340570034 338.8840339565798" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="425.4034306719829 341.45651273371743 422.31645613941777 336.31155517944217 416.99999999999994 343.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c88" name="c88" refID="e38" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="412.0" y="357.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="412.0 357.0 434.8632124746683 410.6406138828756" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="437.6229822685899 409.46431856087617 432.1034426807466 411.81690920487495 437.99999999999994 417.99999999999994" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="398.0" y="338.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679,17038590,17038589 
RIG-I and MDA5 recognize 5′-triphosphate-containing ssRNA/dsRNA and poly(I:C), respectively and induce IFN-alpha/beta production</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p31" name="p29" type="cso30:c:ProcessBiological">
<csml:connector id="c89" name="c89" refID="MO000103999" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="554.0" y="324.810265188326"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="554.0 347.0 594.9656642677058 324.810265188326" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="593.5368148220836 322.1723892887157 596.394513713328 327.44814108793634 602.0 321.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c90" name="c90" refID="e36" type="cso30:c:InputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="602.0" y="262.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="602.0 262.0 608.5689164944001 298.12904071920076" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="611.5205262246999 297.5923844046008 605.6173067641005 298.6656970338007 610.0 306.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c91" name="c91" refID="e39" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="609.3474977942104" y="325.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="612.0 325.0 609.3474977942104 386.0075507331595" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="612.3446662692756 386.1378624059884 606.3503293191453 385.87723906033057 609.0 393.99999999999994" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="602.0" y="306.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="19.0" outlineColor="0 0 0 0" resourceID="10005" width="19.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Binding" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679,17038590,17038589 
RIG-I and MDA5 recognize 5′-triphosphate-containing ssRNA/dsRNA and poly(I:C), respectively and induce IFN-alpha/beta production</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p32" name="p32" type="cso30:c:ProcessBiological">
<csml:connector id="c93" name="c93" refID="e40" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="357.99185428945" y="1197.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="505.0 1197.0 357.99185428945 1203.6390775482184" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="358.1272002088681 1206.6360229067623 357.85650837003186 1200.6421321896748 350.0 1204.0000000000002" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c94" name="c94" refID="e37" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="324.0" y="414.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="324.0 414.0 339.83572142528334 1185.0016868934824" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="342.8350888402274 1184.9400824279637 336.8363540103393 1185.0632913590011 340.0 1193.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c95" name="c95" refID="MO000016660" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="113.94617344720902" y="1177.926459684428"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="329.0 1203.0 113.94617344720902 1177.926459684428" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="113.59875106554854 1180.9062747271314 114.29359582886951 1174.9466446417246 106.0 1177.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="329.0" y="1193.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10031" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 17038590, 17038589 
RIG-I and MDA5 recognize 5′-triphosphate-containing ssRNA/dsRNA and poly(I:C), respectively and induce IFN-alpha/beta production

</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p33" name="p32" type="cso30:c:ProcessBiological">
<csml:connector id="c96" name="c96" refID="G010228" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="317.66814185900927" y="1121.2802632370212"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="690.0 1232.0 317.66814185900927 1121.2802632370212" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="316.81304314512636 1124.1558164341498 318.52324057289223 1118.4047100398927 310.00000000000006 1119.0000000000002" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c97" name="c97" refID="e37" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="300.2776907336067" y="414.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="324.0 414.0 300.2776907336067 1097.0048209615752" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="303.27588287301603 1097.1089549866776 297.2794985941974 1096.9006869364728 300.00000000000006 1105.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c98" name="c98" refID="e41" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="127.52482622568672" y="1053.7160615370822"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="289.0 1112.0 127.52482622568672 1053.7160615370822" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="126.5063031492809 1056.5378713717148 128.54334930209254 1050.8942517024498 120.0 1051.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="289.0" y="1105.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10031" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 17038590, 17038589 
RIG-I and MDA5 recognize 5′-triphosphate-containing ssRNA/dsRNA and poly(I:C), respectively and induce IFN-alpha/beta production

</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p34" name="p32" type="cso30:c:ProcessBiological">
<csml:connector id="c99" name="c99" refID="e40" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="392.6976593413504" y="1107.3750839245918"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="510.0 1184.0 392.6976593413504 1107.3750839245918" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="391.0570028696285 1109.8867061775982 394.3383158130723 1104.8634616715854 386.0 1103.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c100" name="c100" refID="e39" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="382.5503990018443" y="422.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="603.0 422.0 382.5503990018443 1077.4174235954135" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="385.39386515356426 1078.373823221105 379.7069328501244 1076.461023969722 380.0 1085.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c101" name="c101" refID="e41" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="127.86837732985626" y="1050.4452121626266"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="365.0 1094.0 127.86837732985626 1050.4452121626266" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="127.32642276887125 1053.3958536613227 128.41033189084126 1047.4945706639305 119.99999999999999 1049.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="365.0" y="1085.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10031" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 17038590, 17038589 
RIG-I and MDA5 recognize 5′-triphosphate-containing ssRNA/dsRNA and poly(I:C), respectively and induce IFN-alpha/beta production

</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p35" name="p32" type="cso30:c:ProcessBiological">
<csml:connector id="c102" name="c102" refID="G010228" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="425.9894241229342" y="1237.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="690.0 1237.0 425.9894241229342 1250.5887796407312" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="426.14363175766 1253.5848136868315 425.83521648820846 1247.5927455946307 418.00000000000006 1250.9999999999998" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c103" name="c103" refID="e39" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="412.8439679158143" y="422.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="605.0 422.0 412.8439679158143 1233.2154137987015" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="415.76318774130124 1233.906901767132 409.92474809032734 1232.5239258302713 411.0 1241.0000000000002" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c104" name="c104" refID="MO000016660" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="113.77201272554433" y="1179.8962642732429"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="397.0 1249.0 113.77201272554433 1179.8962642732429" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="113.06091362307829 1182.810769045322 114.48311182801038 1176.9817595011639 106.0 1178.0000000000002" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="397.0" y="1241.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10031" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 17038590, 17038589 
RIG-I and MDA5 recognize 5′-triphosphate-containing ssRNA/dsRNA and poly(I:C), respectively and induce IFN-alpha/beta production

</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p36" name="p32" type="cso30:c:ProcessBiological">
<csml:connector id="c105" name="c105" refID="e40" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="370.4739244227113" y="1027.8340510294686"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="517.0 1184.0 370.4739244227113 1027.8340510294686" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="368.2861552866606 1029.8867726879853 372.66169355876207 1025.7813293709519 365.0 1021.9999999999999" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c106" name="c106" refID="e38" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="359.19717645097484" y="446.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="442.0 446.0 359.19717645097484 993.0900841632018" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="362.16339488977417 993.5390253323174 356.2309580121755 992.6411429940862 358.0 1001.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c107" name="c107" refID="e41" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="127.91531931426964" y="1014.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="345.0 1014.0 127.91531931426964 1045.8390865005738" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="128.35066187655448 1048.8073312434249 127.47997675198482 1042.8708417577227 120.00000000000001 1047.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="345.0" y="1001.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10031" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 17038590, 17038589 
RIG-I and MDA5 recognize 5′-triphosphate-containing ssRNA/dsRNA and poly(I:C), respectively and induce IFN-alpha/beta production

</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p37" name="p32" type="cso30:c:ProcessBiological">
<csml:connector id="c108" name="c108" refID="G010228" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="385.82168482165287" y="1239.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="690.0 1239.0 385.82168482165287 1304.3203433235553" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="386.4515560753196 1307.2534751316753 385.1918135679861 1301.3872115154356 378.0 1306.0000000000002" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c110" name="c110" refID="e38" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="369.6930369309187" y="446.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" name="default" points="443.0 446.0 369.6930369309187 1289.0300752944345" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="372.6817586955058 1289.289964143529 366.7043151663317 1288.77018644534 369.0 1297.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c109" name="c109" refID="MO000016660" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="113.19509937149269" y="1184.4972196148292"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" name="default" points="357.0 1303.0 113.19509937149269 1184.4972196148292" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="111.88364201593177 1187.195381879139 114.5065567270536 1181.7990573505194 106.0 1181.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="357.0" y="1297.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="21.0" outlineColor="0 0 0 0" resourceID="10031" width="21.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_Translation" refCellComponentID="cso30:i:CC_Cytosol"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 17038590, 17038589 
RIG-I and MDA5 recognize 5′-triphosphate-containing ssRNA/dsRNA and poly(I:C), respectively and induce IFN-alpha/beta production

</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p38" name="p38" type="cso30:c:ProcessBiological">
<csml:connector id="c112" name="c112" refID="e21" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="387.0" y="953.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" points="387.0 953.0 706.6375552919422 1088.8703981210397" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="707.8111559965524 1086.109481355518 705.4639545873322 1091.6313148865613 714.0000000000001 1092.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c111" name="c111" refID="e33" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="730.0" y="1108.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="730.0 1108.0 747.7934493278424 1148.6707413207826" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="750.5419213325489 1147.4682848187235 745.0449773231358 1149.8731978228418 751.0 1156.0000000000002" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="714.0" y="1086.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="22.0" outlineColor="0 0 0 0" resourceID="10068" width="22.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 12855817
This activates the transcription factors interferon regulatory factor 3 (IRF-3), NF-KappaB, and AP-1 (a complex of activating transcription factor 2 (ATF2) and JUN), leading to the induction of type I IFN (especially IFN-beta), cytokine/chemokine production and dendritic cell (DC) maturation
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p39" name="p38" type="cso30:c:ProcessBiological">
<csml:connector id="c74" name="c74" refID="e32" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="700.0" y="914.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" points="700.0 914.0 755.9488001852984 1049.6047190931808" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="758.7220305253556 1048.4605191626677 753.1755698452413 1050.7489190236938 759.0000000000001 1057.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c113" name="c113" refID="e33" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="757.6214926735981" y="1079.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="763.0 1079.0 757.6214926735981 1148.024177355491" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="760.6124261652891 1148.2572371080903 754.6305591819073 1147.7911176028917 757.0000000000001 1156.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="753.0" y="1057.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="22.0" outlineColor="0 0 0 0" resourceID="10068" width="22.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 12855817
This activates the transcription factors interferon regulatory factor 3 (IRF-3), NF-KappaB, and AP-1 (a complex of activating transcription factor 2 (ATF2) and JUN), leading to the induction of type I IFN (especially IFN-beta), cytokine/chemokine production and dendritic cell (DC) maturation
</csml:comment>
</csml:comments>
</csml:process>
<csml:process id="p40" name="p38" type="cso30:c:ProcessBiological">
<csml:connector id="c115" name="c115" refID="MO000041456" type="cso30:c:InputAssociation">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="813.4928890024968" y="891.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<associationConnector depth="0" points="823.0 891.0 813.4928890024968 1045.0151981595523" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<associationConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="816.4871896926647 1045.2000315354885 810.4985883123289 1044.830364783616 813.0000000000001 1053.0" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
<csml:comments>
<csml:comment type="text">indirect</csml:comment>
</csml:comments>
</csml:connector>
<csml:connector id="c114" name="c114" refID="e33" type="cso30:c:OutputProcess">
<csml:connectorSimulationProperty>
<csml:connectorFiring connectorFiringStyle="csml-connectorFiringStyle:threshold" value="0"/>
<csml:connectorKinetic>
<csml:parameter key="stoichiometry" value="1"/>
</csml:connectorKinetic>
</csml:connectorSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="765.81864999649" y="1075.0"/>
<csml:shape shapeID="default" visible="true">
<csml:toolSpecificGraphics>
<figure xmlns="http://www.csml.org/csml/cigraphics">
<processConnector depth="0" points="806.0 1075.0 765.81864999649 1148.9702125064616" visible="true"/>
</figure>
<targetArrow xmlns="http://www.csml.org/csml/cigraphics">
<processConnectorArrow points="0.0 0.0 0.0 6.0 8.0 3.0" pointsInAbsoluteCoordinate="768.4548203065668 1150.4022062551453 763.1824796864131 1147.538218757778 762.0 1155.9999999999998" size="8.0 6.0"/>
</targetArrow>
</csml:toolSpecificGraphics>
</csml:shape>
</csml:viewProperty>
</csml:connector>
<csml:processSimulationProperty>
<csml:priority value="0"/>
<csml:firing firingOnce="false" firingStyle="csml-firingStyle:and" type="csml-variable:Boolean" value="true"/>
<csml:delay delayStyle="nodelay" value="0.0"/>
<csml:processKinetic calcStyle="csml-calcStyle:speed" fast="false" kineticStyle="csml-kineticStyle:mass">
<csml:parameter key="coefficient2" value="1.0"/>
<csml:parameter key="coefficient1" value="0.1"/>
</csml:processKinetic>
</csml:processSimulationProperty>
<csml:viewProperty viewID="">
<csml:position position="auto" positionID="default" x="801.0" y="1053.0"/>
<csml:shape shapeID="default" visible="true">
<csml:image fileFormat="svg" filePath="" fileType="resourceFile" height="22.0" outlineColor="0 0 0 0" resourceID="10068" width="22.0"/>
<csml:toolSpecificGraphics/>
</csml:shape>
</csml:viewProperty>
<csml:biologicalProperty refBiologicalEventID="cso30:i:ME_GeneExpression" refCellComponentID="cso30:i:CC_Nucleoplasm"/>
<csml:comments>
<csml:comment type="text">PMID: 18262679, 12855817
This activates the transcription factors interferon regulatory factor 3 (IRF-3), NF-KappaB, and AP-1 (a complex of activating transcription factor 2 (ATF2) and JUN), leading to the induction of type I IFN (especially IFN-beta), cytokine/chemokine production and dendritic cell (DC) maturation
</csml:comment>
</csml:comments>
</csml:process>
</csml:processSet>
<csml:factSet>
<csml:fact id="g1" name="g1" type="cso30:c:FactViewGroup">
<csml:participant id="participant-e4" name="participant-e4" refID="e4" type="csml-element:participant"/>
<csml:participant id="participant-e3" name="participant-e3" refID="e3" type="csml-element:participant"/>
<csml:participant id="participant-e2" name="participant-e2" refID="e2" type="csml-element:participant"/>
<csml:participant id="participant-e1" name="participant-e1" refID="e1" type="csml-element:participant"/>
</csml:fact>
<csml:fact id="g14" name="g1" type="cso30:c:FactViewGroup"/>
<csml:fact id="g12" name="g2" type="cso30:c:FactViewGroup">
<csml:participant id="participant-e58" name="participant-e58" refID="e58" type="csml-element:participant"/>
<csml:participant id="participant-e55" name="participant-e55" refID="e55" type="csml-element:participant"/>
<csml:participant id="participant-e51" name="participant-e51" refID="e51" type="csml-element:participant"/>
<csml:participant id="participant-e52" name="participant-e52" refID="e52" type="csml-element:participant"/>
<csml:participant id="participant-e56" name="participant-e56" refID="e56" type="csml-element:participant"/>
<csml:participant id="participant-e59" name="participant-e59" refID="e59" type="csml-element:participant"/>
<csml:participant id="participant-g13" name="participant-g13" refID="g13" type="csml-element:participant"/>
<csml:participant id="participant-e57" name="participant-e57" refID="e57" type="csml-element:participant"/>
<csml:participant id="participant-e53" name="participant-e53" refID="e53" type="csml-element:participant"/>
<csml:participant id="participant-e54" name="participant-e54" refID="e54" type="csml-element:participant"/>
<csml:participant id="participant-e50" name="participant-e50" refID="e50" type="csml-element:participant"/>
</csml:fact>
<csml:fact id="g13" name="g2" type="cso30:c:FactViewGroup">
<csml:participant id="participant-e60" name="participant-e60" refID="e60" type="csml-element:participant"/>
<csml:participant id="participant-e61" name="participant-e61" refID="e61" type="csml-element:participant"/>
<csml:participant id="participant-e62" name="participant-e62" refID="e62" type="csml-element:participant"/>
</csml:fact>
<csml:fact id="g2" name="g1" type="cso30:c:FactViewGroup">
<csml:participant id="participant-e5" name="participant-e5" refID="e5" type="csml-element:participant"/>
<csml:participant id="participant-e6" name="participant-e6" refID="e6" type="csml-element:participant"/>
<csml:participant id="participant-e11" name="participant-e11" refID="e11" type="csml-element:participant"/>
</csml:fact>
</csml:factSet>
<csml:modelSimulationProperty>
<csml:parameter key="enhancedFiring" value="true"/>
<csml:parameter key="discreteWeakFiring" value="false"/>
<csml:parameter key="continousWeakFiring" value="false"/>
<csml:parameter key="samplingInterval" value="0.1"/>
<csml:parameter key="plotUpdateInterval" value="1.0"/>
<csml:parameter key="logUpdateInterval" value="1.0"/>
<csml:parameter key="simulationTime" value="1000.0"/>
<csml:parameter key="firingAccuracy" value="1.0E-10"/>
</csml:modelSimulationProperty>
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:model>
<csml:subModelSet/>
<csml:viewSet>
<csml:view name="Default View" refAnimationID="default" refModelID="undef" refPositionID="default" refShapeID="default" viewID="default"/>
</csml:viewSet>
<csml:references>
<csml:unificationXref db="INTERPRO" name="IPR000157" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000157" unificationXrefID="ref116">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR003591" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR003591" unificationXrefID="ref117">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000483" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000483" unificationXrefID="ref118">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR001611" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR001611" unificationXrefID="ref119">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000372" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000372" unificationXrefID="ref120">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000019398" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000019398" unificationXrefID="ref121">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000022224" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000022224" unificationXrefID="ref122">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR001611" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR001611" unificationXrefID="ref123">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000018132" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000018132" unificationXrefID="ref124">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000066987" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000066987" unificationXrefID="ref125">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000103999" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000103999" unificationXrefID="ref126">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000022224" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000022224" unificationXrefID="ref127">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000041446" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000041446" unificationXrefID="ref128">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000041125" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000041125" unificationXrefID="ref129">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000041437" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000041437" unificationXrefID="ref130">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000198" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000198" unificationXrefID="ref131">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR008936" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR008936" unificationXrefID="ref132">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000000065" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000000065" unificationXrefID="ref133">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR001841" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR001841" unificationXrefID="ref134">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR002083" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002083" unificationXrefID="ref135">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000345" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000345" unificationXrefID="ref136">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR001293" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR001293" unificationXrefID="ref137">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR008974" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR008974" unificationXrefID="ref138">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000016963" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000016963" unificationXrefID="ref139">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR001841" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR001841" unificationXrefID="ref140">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR002083" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002083" unificationXrefID="ref141">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000504" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000504" unificationXrefID="ref142">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR001293" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR001293" unificationXrefID="ref143">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR008974" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR008974" unificationXrefID="ref144">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000000212" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000000212" unificationXrefID="ref145">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000000058" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000000058" unificationXrefID="ref146">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000000058" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000000058" unificationXrefID="ref147">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000719" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000719" unificationXrefID="ref148">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000019331" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000019331" unificationXrefID="ref149">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000719" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000719" unificationXrefID="ref150">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000016608" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000016608" unificationXrefID="ref151">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR008984" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR008984" unificationXrefID="ref152">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR001346" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR001346" unificationXrefID="ref153">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000007694" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000007694" unificationXrefID="ref154">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000041456" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000041456" unificationXrefID="ref155">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000041456" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000041456" unificationXrefID="ref156">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000000058" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000000058" unificationXrefID="ref157">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000000276" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000000276" unificationXrefID="ref158">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000000030" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000000030" unificationXrefID="ref159">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR001452" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR001452" unificationXrefID="ref160">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000719" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000719" unificationXrefID="ref161">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR008266" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR008266" unificationXrefID="ref162">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000980" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000980" unificationXrefID="ref163">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR001245" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR001245" unificationXrefID="ref164">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000000085" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000000085" unificationXrefID="ref165">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000000048" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000000048" unificationXrefID="ref166">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000000048" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000000048" unificationXrefID="ref167">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000000276" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000000276" unificationXrefID="ref168">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000000276" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000000276" unificationXrefID="ref169">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSFAC" name="G010228" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transfac/10.4/bin/start.cgi?ac=TransFac:G010228" unificationXrefID="ref170">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSFAC" name="G010228" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transfac/10.4/bin/start.cgi?ac=TransFac:G010228" unificationXrefID="ref171">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="INTERPRO" name="IPR000471" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000471" unificationXrefID="ref172">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
<csml:unificationXref db="TRANSPATH" name="MO000016660" xmlns:p1="http://www.w3.org/1999/xlink" p1:href="http://www.biobase.de/cgi-bin/biobase/transpath/8.4/bin/get.cgi?MO000016660" unificationXrefID="ref173">
<csml:comments>
<csml:comment type="text"></csml:comment>
</csml:comments>
</csml:unificationXref>
</csml:references>
</csml:project>
