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MyD88, one of these adaptors containing a TIR domain and a death domain (DD), is known to be essential for initiating TLR9 signaling.</csml:comment>
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A mouse forward genetics screening identified Unc93B as a molecule essential for TLR3, TLR7 and TLR9 signaling. This protein is known to interact with a membrane spanning domain of TLR9.</csml:comment>
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TLR2 (together with TLR1 or TLR6) and TLR4 are the receptors mainly involved in the recognition of bacteria-derived ligands, such as microbial lipoproteins and LPS, respectively</csml:comment>
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TLR2 (together with TLR1 or TLR6) and TLR4 are the receptors mainly involved in the recognition of bacteria-derived ligands, such as microbial lipoproteins and LPS, respectively</csml:comment>
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TLR2 (together with TLR1 or TLR6) and TLR4 are the receptors mainly involved in the recognition of bacteria-derived ligands, such as microbial lipoproteins and LPS, respectively</csml:comment>
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TLR3 and 7 (and possibly 8) are involved in the recognition of double-stranded (ds) and single-stranded (ss) RNA, respectively</csml:comment>
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TLR3 and 7 (and possibly 8) are involved in the recognition of double-stranded (ds) and single-stranded (ss) RNA, respectively</csml:comment>
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TLR3 and 7 (and possibly 8) are involved in the recognition of double-stranded (ds) and single-stranded (ss) RNA, respectively</csml:comment>
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<csml:comment type="text">PMID: 18262306,11130078
TLR9 was first cloned and identified as a receptor for unmethylated CpG-DNA as well as for bacterial DNA in 2000</csml:comment>
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TLR9 was first cloned and identified as a receptor for unmethylated CpG-DNA as well as for bacterial DNA in 2000

PMID: 18262306
TLR9 also recognizes bacterial and viral DNA</csml:comment>
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In addition to DNA, hemozoin (HZ) derived from the malaria parasite Plasmodium acts as a TLR9 ligand</csml:comment>
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MyD88, one of these adaptors containing a TIR domain and a death domain (DD), is known to be essential for initiating TLR9 signaling.</csml:comment>
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MyD88 in turn interacts with interleukin-1 receptor-associated kinase-1 (IRAK-1) and IRAK-4 through its DD.</csml:comment>
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IRAK-4 and its kinase activity are shown to be essential for TLR9-mediated cytokine production

PMID: 18262306
IRAK-1 is a known substrate of IRAK-4, and phosphorylated IRAK-1 upregulates its kinase activity, and subsequently recruits tumor necrosis factor associated factor 6 (TRAF6). 
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IRAK-1 is a known substrate of IRAK-4, and phosphorylated IRAK-1 upregulates its kinase activity, and subsequently recruits tumor necrosis factor associated factor 6 (TRAF6).</csml:comment>
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Downstream of TRAF6, transforming growth factor-beta associated kinase 1 (TAK1) is activated to the phosphorylate IKappaB kinase (IKK) complex, which phosphorylates IKappaB to induce nuclear translocation of NF-KappaB</csml:comment>
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Downstream of TRAF6, transforming growth factor-beta associated kinase 1 (TAK1) is activated to the phosphorylate IKappaB kinase (IKK) complex, which phosphorylates IKappaB to induce nuclear translocation of NF-KappaB
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Downstream of TRAF6, transforming growth factor-beta associated kinase 1 (TAK1) is activated to the phosphorylate IKappaB kinase (IKK) complex, which phosphorylates IKappaB to induce nuclear translocation of NF-KappaB
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Downstream of TRAF6, transforming growth factor-beta associated kinase 1 (TAK1) is activated to the phosphorylate IKappaB kinase (IKK) complex, which phosphorylates IκB to induce nuclear translocation of NF-KappaB
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Figure1

PMID: 18262306,16862162,16186825
A study of Ubc13-deificient mice revealed that UBC13 is prerequisite for the activation of mitogen-activated protein (MAP) kinases, but is dispensable for NF-KappaB activation, whereas TAK1 is required for both

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Figure1</csml:comment>
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Figure 1</csml:comment>
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Figure 1</csml:comment>
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Transcription factors NF-KappaB and AP-1 are responsible for the transcription of proinflammatory cytokine genes, including TNF-alpha, IL-6 and IL-12.

PMID: 18262306,12626561 
Upon B or K-type CpG-DNA stimulation, cDCs and macrophages produce proinflammatory cytokines, such as TNF-alpha, IL-6 and IL-12, and upregulate surface expression of MHC class II and co-stimulatory molecules</csml:comment>
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Transcription factors NF-KappaB and AP-1 are responsible for the transcription of proinflammatory cytokine genes, including TNF-alpha, IL-6 and IL-12.

PMID: 18262306,12626561 
Upon B or K-type CpG-DNA stimulation, cDCs and macrophages produce proinflammatory cytokines, such as TNF-alpha, IL-6 and IL-12, and upregulate surface expression of MHC class II and co-stimulatory molecules</csml:comment>
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Transcription factors NF-KappaB and AP-1 are responsible for the transcription of proinflammatory cytokine genes, including TNF-alpha, IL-6 and IL-12.

PMID: 18262306,12626561 
Upon B or K-type CpG-DNA stimulation, cDCs and macrophages produce proinflammatory cytokines, such as TNF-alpha, IL-6 and IL-12, and upregulate surface expression of MHC class II and co-stimulatory molecules</csml:comment>
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Transcription factors NF-KappaB and AP-1 are responsible for the transcription of proinflammatory cytokine genes, including TNF-alpha, IL-6 and IL-12.

PMID: 18262306,12626561 
Upon B or K-type CpG-DNA stimulation, cDCs and macrophages produce proinflammatory cytokines, such as TNF-alpha, IL-6 and IL-12, and upregulate surface expression of MHC class II and co-stimulatory molecules</csml:comment>
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Transcription factors NF-KappaB and AP-1 are responsible for the transcription of proinflammatory cytokine genes, including TNF-alpha, IL-6 and IL-12.

PMID: 18262306,12626561 
Upon B or K-type CpG-DNA stimulation, cDCs and macrophages produce proinflammatory cytokines, such as TNF-alpha, IL-6 and IL-12, and upregulate surface expression of MHC class II and co-stimulatory molecules</csml:comment>
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Transcription factors NF-KappaB and AP-1 are responsible for the transcription of proinflammatory cytokine genes, including TNF-alpha, IL-6 and IL-12.

PMID: 18262306,12626561 
Upon B or K-type CpG-DNA stimulation, cDCs and macrophages produce proinflammatory cytokines, such as TNF-alpha, IL-6 and IL-12, and upregulate surface expression of MHC class II and co-stimulatory molecules</csml:comment>
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IRF-5 interacts with MyD88 and TLR stimulation induces nuclear translocation of IRF-5 which regulates the production of several cytokines such as IL-6, IL-12, and TNF-alpha</csml:comment>
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IRF-5 interacts with MyD88 and TLR stimulation induces nuclear translocation of IRF-5 which regulates the production of several cytokines such as IL-6, IL-12, and TNF-alpha
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IRF-5 interacts with MyD88 and TLR stimulation induces nuclear translocation of IRF-5 which regulates the production of several cytokines such as IL-6, IL-12, and TNF-alpha
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IRF-5 interacts with MyD88 and TLR stimulation induces nuclear translocation of IRF-5 which regulates the production of several cytokines such as IL-6, IL-12, and TNF-alpha
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TLR9 is originally localized in the ER, and then migrates to the endosome when the cells are stimulated</csml:comment>
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Upon B or K-type CpG-DNA stimulation, cDCs and macrophages produce proinflammatory cytokines, such as TNF-alpha, IL-6 and IL-12, and upregulate surface expression of MHC class II and co-stimulatory molecules</csml:comment>
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Upon B or K-type CpG-DNA stimulation, cDCs and macrophages produce proinflammatory cytokines, such as TNF-alpha, IL-6 and IL-12, and upregulate surface expression of MHC class II and co-stimulatory molecules</csml:comment>
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cDC produces IL-15 upon TLR9 stimulation</csml:comment>
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IL-15 in turn activates pDC to express CD40L on its surface.</csml:comment>
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At the same time, TLR9 signaling facilitates expression of CD40 on cDC</csml:comment>
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Consequently, crosstalk between cDC and pDC via CD40-CD40L ligation leads to production of IL-12 from cDC.</csml:comment>
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Consequently, crosstalk between cDC and pDC via CD40-CD40L ligation leads to production of IL-12 from cDC.</csml:comment>
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It was revealed that IRF-1 also interacts with MyD88, and IRF-1, but not IRF-7, and is activated in response to TLR9 stimulation of cDCs to control the expression of IFN-beta</csml:comment>
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It was revealed that IRF-1 also interacts with MyD88, and IRF-1, but not IRF-7, and is activated in response to TLR9 stimulation of cDCs to control the expression of IFN-beta</csml:comment>
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It was revealed that IRF-1 also interacts with MyD88, and IRF-1, but not IRF-7, and is activated in response to TLR9 stimulation of cDCs to control the expression of IFN-beta</csml:comment>
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TLR9 was first cloned and identified as a receptor for unmethylated CpG-DNA as well as for bacterial DNA in 2000</csml:comment>
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MyD88, one of these adaptors containing a TIR domain and a death domain (DD), is known to be essential for initiating TLR9 signaling.</csml:comment>
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IRF-7 directly interacts with MyD88 and forms a large complex with IRAK-1, IRAK-4 and TRAF6 in pDCs
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IRF-7 is phosphorylated in the complex and translocates into the nucleus to induce transcription of type I IFNs and IFN-inducible genes.</csml:comment>
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IRF-7 is phosphorylated in the complex and translocates into the nucleus to induce transcription of type I IFNs and IFN-inducible genes.</csml:comment>
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IRF-7 is phosphorylated in the complex and translocates into the nucleus to induce transcription of type I IFNs and IFN-inducible genes.</csml:comment>
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IRF-7 is phosphorylated in the complex and translocates into the nucleus to induce transcription of type I IFNs and IFN-inducible genes.</csml:comment>
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MyD88 in turn interacts with interleukin-1 receptor-associated kinase-1 (IRAK-1) and IRAK-4 through its DD.</csml:comment>
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IRAK-4 and its kinase activity are shown to be essential for TLR9-mediated cytokine production

PMID: 18262306
IRAK-1 is a known substrate of IRAK-4, and phosphorylated IRAK-1 upregulates its kinase activity, and subsequently recruits tumor necrosis factor associated factor 6 (TRAF6). 
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IRAK-1 is a known substrate of IRAK-4, and phosphorylated IRAK-1 upregulates its kinase activity, and subsequently recruits tumor necrosis factor associated factor 6 (TRAF6).</csml:comment>
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TLR9 also recognizes bacterial and viral DNA</csml:comment>
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Nevertheless, recent studies revealed that cytosolic PRRs called Retinoic acid-inducible gene (RIG-I)-like helicases (RLHs) can recognize viral RNA in the cytosol</csml:comment>
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Nevertheless, recent studies revealed that cytosolic PRRs called Retinoic acid-inducible gene (RIG-I)-like helicases (RLHs) can recognize viral RNA in the cytosol

PMID: 18262306
The recognition of viral RNAs by these helicases induces production of type I IFNs and an associated antiviral response. </csml:comment>
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The recognition of viral RNAs by these helicases induces production of type I IFNs and an associated antiviral response. </csml:comment>
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The recognition of viral RNAs by these helicases induces production of type I IFNs and an associated antiviral response. </csml:comment>
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Recently, a potential cytoplasmic DNA receptor named DAI (also known as DLM1 or ZBP1) was identified</csml:comment>
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