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PMID: 17706453
Furthermore, MDA5 and RIG-I recognize different types of dsRNAs: MDA5 recognizes poly(I:C), and RIG-I detects in vitro transcribed dsRNAs.</csml:comment>
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PMID: 17706453
Furthermore, MDA5 and RIG-I recognize different types of dsRNAs: MDA5 recognizes poly(I:C), and RIG-I detects in vitro transcribed dsRNAs.</csml:comment>
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</csml:comment>
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PMID:17706453
TRIM25 alpha contains a RING-finger domain, a B box/coiled-coil domain and a SPRY domain and induces robust ubiquitination of the CARD domains of RIG-I.

PMID: 17706453
The carboxy-terminal SPRY domain of TRIM25 alpha interacts with the N-terminal CARDs of RIG-I; this interaction effectively delivers the Lys 63-linked ubiquitin moiety to the N-terminal CARDs of RIG-I, resulting in a marked increase in RIG-I downstream signaling activity.</csml:comment>
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<csml:comment type="text">


PMID: 17706453
The carboxy-terminal SPRY domain of TRIM25 alpha interacts with the N-terminal CARDs of RIG-I; this interaction effectively delivers the Lys 63-linked ubiquitin moiety to the N-terminal CARDs of RIG-I, resulting in a marked increase in RIG-I downstream signaling activity.</csml:comment>
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PMID: 17706453,16785313,16125763,16153868,16177806
The adaptor molecule providing a link between RIG-I sensing of incoming viral RNA and downstream activation events was independently elucidated as mitochondrial antiviral signaling adapter (MAVS), also known as (IPS-1/VISA/Cardif)

PMID: 17706453,16177806
MAVS interacts with RIG-I and recruits IKKvar epsilon through its C-terminal region; knockdown by siRNA inhibited RIG-I-dependent antiviral responses</csml:comment>
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PMID: 17706453
TRAF3 and/or TRAF6 are also recruited to MAVS through a direct interaction with a TRAF-interaction motif within MAVS. </csml:comment>
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PMID: 17706453,17047224
Inducible activation of canonical NF-&#954;B signaling requires phosphorylation of the I&#954;B inhibitor by the 700&#8211;900 kDa multi-protein canonical IKK complex composed of two catalytic kinase subunits, IKKgreek small letter alpha and IKK&#946;, and a non-enzymatic regulatory subunit NF-&#954;B Essential Modulator (NEMO) or IKK&#947;</csml:comment>
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PMID: 17706453,10759890
Both TBK-1 and IKK epsilon interact with the TNF-receptor-associated factor (TRAF)-interacting protein/TRAF family member-associated NF-&#954;B activator (I-TRAF/TANK) protein, a modulator of TNF alpha-induced NF-&#954;B activation
</csml:comment>
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</csml:comment>
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<csml:comment type="text">


PMID: 17706543,14560022
Associated Protein 1 (NAP1), a homologue of I-TRAF/TANK, has also been shown to directly interact with TBK-1 and IKK epsilon</csml:comment>
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PMID: 17706543,10759890
Overexpression of IKKvar epsilon or TBK-1 induces phosphorylation of I-TRAF/TANK, which results in its dissociation from TRAF2 and subsequent activation of NF-&#954;B transcription through the classical IKK pathway</csml:comment>
</csml:comments>
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PMID: 17706543,10759890
Overexpression of IKKvar epsilon or TBK-1 induces phosphorylation of I-TRAF/TANK, which results in its dissociation from TRAF2 and subsequent activation of NF-&#954;B transcription through the classical IKK pathway</csml:comment>
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</csml:comment>
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<csml:comment type="text">


PMID: 17706453
TRAF3 and/or TRAF6 are also recruited to MAVS through a direct interaction with a TRAF-interaction motif within MAVS. </csml:comment>
</csml:comments>
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</csml:comment>
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PMID: 17706542
NEMO association with the adapter TANK facilitates the recruitment of TBK1 and IKKvar epsilon to the MAVS-TRAF complex and results in activation of TBK1 and IKKvar epsilon

PMID: 17706453,12133833,17468758
Physical association between TANK and NEMO suggest that the canonical IKK complex and the IKK-related kinases may exist as a physically associated signaling complex responsible for phosphorylation of additional transcription factors

PMID: 17706453
NEMO acts downstream of MAVS and RIG-I, and physically interacts with the TANK adapter to mediate recruitment of TBK1 and IKKvar epsilon to the RIG-I&#8211;MAVS complex.</csml:comment>
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PMID: 17706542
NEMO association with the adapter TANK facilitates the recruitment of TBK1 and IKKvar epsilon to the MAVS-TRAF complex and results in activation of TBK1 and IKK epsilon</csml:comment>
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PMID: 17706542
NEMO association with the adapter TANK facilitates the recruitment of TBK1 and IKKvar epsilon to the MAVS-TRAF complex and results in activation of TBK1 and IKK epsilon</csml:comment>
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PMID: 17706453,15367631,14679297,16914100
Both TBK-1 and IKKvar epsilon directly phosphorylate IRF-3 and IRF-7 at key resides within their C-terminal signal-responsive domain in vitro and both kinases target identical serine residues

PMID: 17706543
Activated TBK1 and IKKvar epsilon phosphorylate IRF3 and IRF7, which provoke IFN expression and development of an antiviral state.</csml:comment>
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PMID: 17706453,15367631,14679297,16914100
Both TBK-1 and IKKvar epsilon directly phosphorylate IRF-3 and IRF-7 at key resides within their C-terminal signal-responsive domain in vitro and both kinases target identical serine residues

PMID: 17706543
Activated TBK1 and IKKvar epsilon phosphorylate IRF3 and IRF7, which provoke IFN expression and development of an antiviral state.</csml:comment>
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PMID: 17706453,10082512
Based on available biochemical data, a model for IRF-3 activation proposes that C-terminal phosphorylation induces a conformational change in IRF-3 that allows homo- and hetero-dimerization, nuclear localization, and association with the co-activator CBP/p300</csml:comment>
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PMID: 17706453,10082512
Based on available biochemical data, a model for IRF-3 activation proposes that C-terminal phosphorylation induces a conformational change in IRF-3 that allows homo- and hetero-dimerization, nuclear localization, and association with the co-activator CBP/p300</csml:comment>
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PMID: 17706453,10082512
Based on available biochemical data, a model for IRF-3 activation proposes that C-terminal phosphorylation induces a conformational change in IRF-3 that allows homo- and hetero-dimerization, nuclear localization, and association with the co-activator CBP/p300</csml:comment>
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indirect</csml:comment>
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PMID: 17706453,17395583
Inactive IRF-3 constitutively shuttles into and out of the nucleus, whereas phosphorylation-dependent association with CBP/p300 retains IRF-3 in the nucleus and induces transcription of IFN-&#946; and other genes</csml:comment>
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PMID: 17706542
NEMO association with the adapter TANK facilitates the recruitment of TBK1 and IKKvar epsilon to the MAVS-TRAF complex and results in activation of TBK1 and IKK epsilon</csml:comment>
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PMID: 17706453,17047224
Inducible activation of canonical NF-&#954;B signaling requires phosphorylation of the I&#954;B inhibitor by the 700&#8211;900 kDa multi-protein canonical IKK complex composed of two catalytic kinase subunits, IKKgreek small letter alpha and IKK&#946;, and a non-enzymatic regulatory subunit NF-&#954;B Essential Modulator (NEMO) or IKK&#947;

PMID: 17706543
MAVS-TRAF complexes also activate the canonical NEMO-IKKalpha-IKK&#946; complex which phosphorylates the inhibitory subunit I&#954;Balpha, resulting in the release of NF-&#954;B and activation of proinflammatory gene transcription.</csml:comment>
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PMID: 17706543
MAVS-TRAF complexes also activate the canonical NEMO-IKKalpha-IKK&#946; complex which phosphorylates the inhibitory subunit I&#954;Balpha, resulting in the release of NF-&#954;B and activation of proinflammatory gene transcription.</csml:comment>
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PMID: 17706453
The structural and functional consequences of this phosphorylation remain to be determined, although it is suggested that IKKvar epsilon-dependent phosphorylation of STAT1 appears to guide the transcriptional machinery to a subset of ISGs required for the direct antiviral response, whereas the IKK-independent genes may function in regulating the IFN signaling required for integration of innate and adaptive immune systems.</csml:comment>
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